Information report for AT3G49580
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0010438 — involved in — cellular response to sulfur starvation
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0005737 — located in — cytoplasm
- GO:0098869 — involved in — cellular oxidant detoxification
- GO:0009651 — involved in — response to salt stress
Functional Keywords
Literature and News
- Identification of a novel cis-acting element conferring sulfur deficiency response in Arabidopsis roots. DOI: 10.1111/j.1365-313X.2005.02363.x ; PMID: 15842617
- Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response. DOI: 10.1093/jxb/eri179 ; PMID: 15911562
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A contribution to identification of novel regulators of plant response to sulfur deficiency: characteristics of a tobacco gene UP9C, its protein product and the effects of UP9C silencing. DOI: 10.1093/mp/ssq007 ; PMID: 20147370
- Ethylene promotes cadmium-induced root growth inhibition through EIN3 controlled XTH33 and LSU1 expression in Arabidopsis. DOI: 10.1111/pce.13361 ; PMID: 29869796
- Active O-acetylserine-(thiol) lyase A and B confer improved selenium resistance and degrade l-Cys and l-SeCys in Arabidopsis. DOI: 10.1093/jxb/erac021 ; PMID: 35084469
- Overexpression of LSU1 and LSU2 confers cadmium tolerance by manipulating sulfur metabolism in Arabidopsis. DOI: 10.1016/j.chemosphere.2023.139046 ; PMID: 37244555
Gene Resources
- UniProt: A0A178VF66
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VF66
- EnsemblPlants: AT3G49580.1
- Gramene: AT3G49580.1
- KEGG: ath:AT3G49580
- Orthologous matrix: SACNICA
- ExpressionAtlas: AT3G49580
- InterPro: IPR039282
- PANTHER: PTHR34283, PTHR34283:SF1
- OrthoDB: A0A178VF66
- SWISS-MODEL: A0A178VF66
Sequences
cDNA Sequence
- >AT3G49580.1
CATACATAAGCCATGAGTATGTTTAAGTTTCAAGTAAGGAGAAAATATTGACCGAAATCAAAAGTGAGGAGAAATAAAAATCAAGAAGCAGATACATTGAACCTGGACATGCAAAAGCTACACAAAGCGCCTATTAAAGAAACATAATCAAACCCTAACACTCAACAAATCAAGAAACAAAGTTAGAACCACAATCAAATCCTTTTACACAAAGAATCTTAATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAGAATAAGATATTTCTCATAAGTTATGTATAGTTGTGTATGTGACAATCACTATACATGTATATAGATCGATGGTAATATGTTATGTTTTCAACATAAATTAAATGTTTGAATCCATTTCTAGTGAATAAATTAGAATTTCTGATAATCATACAAATTGTTGAACTCCATTTCTAATGAATTAGTATTTCTGGTACTAGTTGCA - >AT3G49580.3
CATACATAAGCCATGAGTATGTTTAAGTTTCAAGTAAGGAGAAAATATTGACCGAAATCAAAAGTGAGGAGAAATAAAAATCAAGAAGCAGATACATTGAACCTGGACATGCAAAAGCTACACAAAGCGCCTATTAAAGAAACATAATCAAACCCTAACACTCAACAAATCAAGAAACAAAGTTAGAACCACAATCAAATCCTTTTACACAAAGAATCTTAATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAGAATAAGATATTTCTCATAAGTTATGTATAGTTGTGTATGTGACAATCACTATACATGTATATAGATCGATGGTAATATGTTATGTTTTCAACATAAATTAAATGTTTGAATCCATTTCTAGTGAATAAATTAGAATTTCTGATAATCATACAAATTGTTGAACTCCATTTCTAATGAATTAGTATTTCTGGTACTAGTTGCA - >AT3G49580.2
CATACATAAGCCATGAGTATGTTTAAGTTTCAAGTAAGGAGAAAATATTGACCGAAATCAAAAGTGAGGAGAAATAAAAATCAAGAAGCAGATACATTGAACCTGGACATGCAAAAGCTACACAAAGCGCCTATTAAAGAAACATAATCAAACCCTAACACTCAACAAATCAAGAAACAAAGTTAGAACCACAATCAAATCCTTTTACACAAAGAATCTTAATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAGAATAAGATATTTCTCATAAGTTATGTATAGTTGTGTATGTGACAATCACTATACATGTATATAGATCGATGGTAATATGTTATGTTTTCAACATAAATTAAATGTTTGAATCCATTTCTAGTGAATAAATTAGAATTTCTGATAATCATACAAATTGTTGAACTCCATTTCTAATGAATTAGTATTTCTGGTACTAGTTGCA
CDS Sequence
- >AT3G49580.1
ATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAG - >AT3G49580.3
ATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAG - >AT3G49580.2
ATGGCGAACCGAGGAGGATGCGTGACGGTGGCGGCGGAAGAGATGGATGAGCTAAGGAGGAGGAACATAGAGCTCTCGAGAGAAGTGGCGGAGATGAAGACAGAAATGATTAAGTTGTGGCAGCGAACGGTTGTGGCGGAGGAGGCGGAAGAGCAACTCTGCTCGCAGCTGGCGGAGCTGGAGGTCGAGTCTTTAGAACAGGCACGTGACTATCACGATCGCATGCTCTTCCTCATGGATCAAATCTCTCGTCTCTCTTCTTCTTCTGTCGTCTCTTCCTCGTAG
Protein Sequence
- >AT3G49580.1
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS - >AT3G49580.3
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS - >AT3G49580.2
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS