Gene Details:
- Gene ID: AT3G49140
- Gene Symbol: HugZ-2
- Gene Name:
- Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
- TAIR Accession: locus:2101348
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0019219 — acts upstream of or within — regulation of nucleobase-containing compound metabolic process
- GO:0009536 — located in — plastid
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0015994 — acts upstream of or within — chlorophyll metabolic process
- GO:0003674 — enables — molecular_function
- GO:0044271 — acts upstream of or within — cellular nitrogen compound biosynthetic process
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0009416 — acts upstream of or within — response to light stimulus
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
Sequences:
cDNA Sequence
- >AT3G49140.1
GGTGAAAGTGAAAGTTACACTTTTTAGACAATATCTAGTTGGGTTTCGACGAATGAGAATATGACACGTCATCACCGGTAAGGAAAATTCACCAAATAGATGATAGCCTAATCTGCAAATCTTTGTCCAGCTTCTGAGCTCAGAGATAGAGAGAGCGAGAGGTTAGAGATAACAGTAGTTTTACCGATGATTGAGTCGGTTATGGCCGTTCGTCTCTCCACCGGATTTTGCTCGTCGACGGCGTTACTCCAGTATCGTACAGCACCGAGCTCGGAGGAGGGAGGAAACTGCTTCCATTATGCGTCCCGCCGCGTTTTTCAGCCTCAACGTATCCACCATATTGATGGGAGTGGGTTTCTGAAGTACAACAGTGACTATATAACAAGAAAACACCTACGGAAGAATCGAACTCAAGCCACAGCTGAGTATGTAGATTCAGCTTCAGATCCAGAAAAGCAAACTGGCAAGTCAAGGTATCATCCTTCAGAAGAAATCAGAGCCTCTTTGCCACAGAATGATGGAGATTCCAGGCTTTCACCTGCAGAAACTACTAGAACCATCATTGAGGTGAACAATAAAGGAACCCTGATGCTTACAGGTTCTATTGGTGATGGAGTTCATGAGAATATTCTCTGGCCAGATATACCTTATATAACAGATCAAAATGGAAATTTATACTTTCAAGTAAAGGAGGATGAGGACGTCATGCAGTCCGTTACTTCTGAAAATAATTATGTGCAAGTTATAGTTGGTTTTGATACGATGGAGATGATCAAGGAAATGGAGCTGATGGGACTTTCTGATAGTGACTTTGAAACTGAAGATGATGAAAGTGGAGATGATGACAGTGAGGATACAGGAGAAGACGAAGATGAGGAGGAATGGGTTGCTATTTTAGAGGATGAAGATGAAGACGATGATGATGATGATGATGATGATGAGGATGATGATGATTCTGATTCTGATGAATCGCTGGGAGACTGGGCAAATTTGGAAACAATGAGGAGTTGTCATCCCATGTTTTTTGCAAAGAGAATGACTGAGGTTGCTTCAAATGATCCTGTTGATTGGATGGATCAGCCGTCTGCTGGCCTTGCTATCCAGGGACTTTTGAGTCATATCTTAGTGGAAGATTATTCAGATATCCAAAAGAAACTTGCTGATAGCAATTCTACAACTAACGGAAACAAGGATGCAGAAAACTTAGTGGACAAGCTTGAAGACAATAGTAAGGCAGGTGGTGACGAATCTGAGATAGATTCATCACAGGATGAAAAAGCAAGAAATGTGGTGGCGTTTTACAAGCTGGAGATGATAAGAATTCAGCTTATCACAGCACAAGGGGATCAGACTGAAGTTGAGGTGGAAGATGTCAGAAAAGCACAACCTGATGCTATTGCTCATGCATCAGCTGAAATCATAAGCCGTTTAGAAGAATCTGGTGATAAAATAACTGAAGCACTCAAATCTCTGTGTTGGAGACATAACAGTATTCAAGCAGAGGAAGTGAAGCTGATTGGGATAGATTCCCTAGGTTTTGACCTCAGGCTTTGCGCAGGAGCAAAGATTGAGTCATTGCGATTTGCATTCTCGACAAGGGCAACATCAGAAGAAAACGCAGAGGGACAAATAAGAAAACTATTATTCCCGAAAACGAACCAGTCGACACAACCAAAACCAAAATGAACAAGTCAGAGGGAATGTTGACGCTGTAGTAATCTTCTGTGAAGCTGCAGAGAACAGTTCCATGAACCAAAATCCAAACAAGCAATGCATATGTTTCTGGAACAAATATGAACAAGTTCTTGGAGATCTAAGCAAAAGAGTAAGATCAGTGACTTCAAGCAATTTTTCAATTGATTTTTGAACGCTGTAATTTCGTGTTAAATATTGGTTTCAAGTTTGTGGGTTACTCTGCACAAATTGGGCATTGAAGTTCCAACCCATTATTGGTTTCAAGTTTGTGGGTTATCTTCTGTTTGAGTTAATGTTTTTTTCGTATAACTTACA
CDS Sequence
- >AT3G49140.1
ATGATTGAGTCGGTTATGGCCGTTCGTCTCTCCACCGGATTTTGCTCGTCGACGGCGTTACTCCAGTATCGTACAGCACCGAGCTCGGAGGAGGGAGGAAACTGCTTCCATTATGCGTCCCGCCGCGTTTTTCAGCCTCAACGTATCCACCATATTGATGGGAGTGGGTTTCTGAAGTACAACAGTGACTATATAACAAGAAAACACCTACGGAAGAATCGAACTCAAGCCACAGCTGAGTATGTAGATTCAGCTTCAGATCCAGAAAAGCAAACTGGCAAGTCAAGGTATCATCCTTCAGAAGAAATCAGAGCCTCTTTGCCACAGAATGATGGAGATTCCAGGCTTTCACCTGCAGAAACTACTAGAACCATCATTGAGGTGAACAATAAAGGAACCCTGATGCTTACAGGTTCTATTGGTGATGGAGTTCATGAGAATATTCTCTGGCCAGATATACCTTATATAACAGATCAAAATGGAAATTTATACTTTCAAGTAAAGGAGGATGAGGACGTCATGCAGTCCGTTACTTCTGAAAATAATTATGTGCAAGTTATAGTTGGTTTTGATACGATGGAGATGATCAAGGAAATGGAGCTGATGGGACTTTCTGATAGTGACTTTGAAACTGAAGATGATGAAAGTGGAGATGATGACAGTGAGGATACAGGAGAAGACGAAGATGAGGAGGAATGGGTTGCTATTTTAGAGGATGAAGATGAAGACGATGATGATGATGATGATGATGATGAGGATGATGATGATTCTGATTCTGATGAATCGCTGGGAGACTGGGCAAATTTGGAAACAATGAGGAGTTGTCATCCCATGTTTTTTGCAAAGAGAATGACTGAGGTTGCTTCAAATGATCCTGTTGATTGGATGGATCAGCCGTCTGCTGGCCTTGCTATCCAGGGACTTTTGAGTCATATCTTAGTGGAAGATTATTCAGATATCCAAAAGAAACTTGCTGATAGCAATTCTACAACTAACGGAAACAAGGATGCAGAAAACTTAGTGGACAAGCTTGAAGACAATAGTAAGGCAGGTGGTGACGAATCTGAGATAGATTCATCACAGGATGAAAAAGCAAGAAATGTGGTGGCGTTTTACAAGCTGGAGATGATAAGAATTCAGCTTATCACAGCACAAGGGGATCAGACTGAAGTTGAGGTGGAAGATGTCAGAAAAGCACAACCTGATGCTATTGCTCATGCATCAGCTGAAATCATAAGCCGTTTAGAAGAATCTGGTGATAAAATAACTGAAGCACTCAAATCTCTGTGTTGGAGACATAACAGTATTCAAGCAGAGGAAGTGAAGCTGATTGGGATAGATTCCCTAGGTTTTGACCTCAGGCTTTGCGCAGGAGCAAAGATTGAGTCATTGCGATTTGCATTCTCGACAAGGGCAACATCAGAAGAAAACGCAGAGGGACAAATAAGAAAACTATTATTCCCGAAAACGAACCAGTCGACACAACCAAAACCAAAATGA
Protein Sequence
- >AT3G49140.1
MIESVMAVRLSTGFCSSTALLQYRTAPSSEEGGNCFHYASRRVFQPQRIHHIDGSGFLKYNSDYITRKHLRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQNDGDSRLSPAETTRTIIEVNNKGTLMLTGSIGDGVHENILWPDIPYITDQNGNLYFQVKEDEDVMQSVTSENNYVQVIVGFDTMEMIKEMELMGLSDSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDSDESLGDWANLETMRSCHPMFFAKRMTEVASNDPVDWMDQPSAGLAIQGLLSHILVEDYSDIQKKLADSNSTTNGNKDAENLVDKLEDNSKAGGDESEIDSSQDEKARNVVAFYKLEMIRIQLITAQGDQTEVEVEDVRKAQPDAIAHASAEIISRLEESGDKITEALKSLCWRHNSIQAEEVKLIGIDSLGFDLRLCAGAKIESLRFAFSTRATSEENAEGQIRKLLFPKTNQSTQPKPK