Information report for AT3G49120
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- PO:0000005 — cultured plant cell — célula cultivada (Spanish, exact), 培養植物細胞 (Japanese, exact), cell suspension (related), cultured cell (broad)
- GO:0099503 — located in — secretory vesicle
- GO:0000325 — located in — plant-type vacuole
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0005576 — located in — extracellular region
- GO:0002221 — acts upstream of or within — pattern recognition receptor signaling pathway
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0009505 — located in — plant-type cell wall
- GO:0072593 — acts upstream of or within — reactive oxygen species metabolic process
- GO:0005829 — located in — cytosol
- GO:0009826 — acts upstream of or within — unidimensional cell growth
- GO:0006952 — acts upstream of or within — defense response
- GO:0020037 — enables — heme binding
- GO:0048046 — located in — apoplast
- GO:0004601 — enables — peroxidase activity
- GO:0005794 — located in — Golgi apparatus
- GO:0006979 — involved in — response to oxidative stress
- CS68900 — Larger leaves than wildtype. Delayed senescence. Reduced oxidative burst in response to a fungal elictor.
- prx32 prx34 — sensitive to salt stress; reduced root length under salt stress.
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Structural diversity and transcription of class III peroxidases from Arabidopsis thaliana. DOI: 10.1046/j.1432-1033.2002.03311.x ; PMID: 12473102
- Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. DOI: 10.1104/pp.103.020941 ; PMID: 12805589
- Generation of Arabidopsis protein chips for antibody and serum screening. DOI: 10.1023/a:1025424814739 ; PMID: 14558660
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks. DOI: 10.1002/pmic.200200500 ; PMID: 14730673
- Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance. DOI: 10.1104/pp.104.040444 ; PMID: 15181204
- Expression analysis of the Arabidopsis peroxidase multigenic family. DOI: 10.1016/j.phytochem.2004.04.017 ; PMID: 15231406
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Proteomic analysis of secreted proteins from Arabidopsis thaliana seedlings: improved recovery following removal of phenolic compounds. DOI: 10.1016/j.phytochem.2004.12.013 ; PMID: 15694452
- Ozone-induced programmed cell death in the Arabidopsis radical-induced cell death1 mutant. DOI: 10.1104/pp.104.055681 ; PMID: 15728341
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Drought tolerance established by enhanced expression of the CC-NBS-LRR gene, ADR1, requires salicylic acid, EDS1 and ABI1. DOI: 10.1111/j.1365-313X.2004.02086.x ; PMID: 15144382
- The WRKY70 transcription factor: a node of convergence for jasmonate-mediated and salicylate-mediated signals in plant defense. DOI: 10.1105/tpc.016980 ; PMID: 14742872
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- Loss of Necrotic Spotted Lesions 1 associates with cell death and defense responses in Arabidopsis thaliana. DOI: 10.1007/s11103-006-9001-6 ; PMID: 16900325
- Peroxidase-dependent apoplastic oxidative burst in Arabidopsis required for pathogen resistance. DOI: 10.1111/j.1365-313X.2006.02837.x ; PMID: 16889645
- Whirly transcription factors: defense gene regulation and beyond. DOI: 10.1016/j.tplants.2004.12.008 ; PMID: 15708347
- Phytotoxicity and innate immune responses induced by Nep1-like proteins. DOI: 10.1105/tpc.106.044180 ; PMID: 17194768
- Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids. DOI: 10.1104/pp.106.090662 ; PMID: 17189325
- Suppression by ABA of salicylic acid and lignin accumulation and the expression of multiple genes, in Arabidopsis infected with Pseudomonas syringae pv. tomato. DOI: 10.1007/s10142-006-0041-4 ; PMID: 17149585
- Dual regulation role of GH3.5 in salicylic acid and auxin signaling during Arabidopsis-Pseudomonas syringae interaction. DOI: 10.1104/pp.107.106021 ; PMID: 17704230
- Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. DOI: 10.1104/pp.107.110908 ; PMID: 18192438
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Sphingolipid long-chain base hydroxylation is important for growth and regulation of sphingolipid content and composition in Arabidopsis. DOI: 10.1105/tpc.107.057851 ; PMID: 18612100
- Transcriptional responses of Arabidopsis thaliana plants to As (V) stress. DOI: 10.1186/1471-2229-8-87 ; PMID: 18684332
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- A peroxidase-dependent apoplastic oxidative burst in cultured Arabidopsis cells functions in MAMP-elicited defense. DOI: 10.1104/pp.111.190140 ; PMID: 22319074
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- MPK6 controls H2 O2-induced root elongation by mediating Ca2+ influx across the plasma membrane of root cells in Arabidopsis seedlings. DOI: 10.1111/nph.12990 ; PMID: 25145265
- Apoplastic peroxidases are required for salicylic acid-mediated defense against Pseudomonas syringae. DOI: 10.1016/j.phytochem.2014.07.010 ; PMID: 25096754
- Identifying the ionically bound cell wall and intracellular glycoside hydrolases in late growth stage Arabidopsis stems: implications for the genetic engineering of bioenergy crops. DOI: 10.3389/fpls.2015.00315 ; PMID: 26029221
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Cytokinin-Mediated Regulation of Reactive Oxygen Species Homeostasis Modulates Stomatal Immunity in Arabidopsis. DOI: 10.1105/tpc.16.00583 ; PMID: 28254779
- A light-sensitive mutation in Arabidopsis LEW3 reveals the important role of N-glycosylation in root growth and development. DOI: 10.1093/jxb/erx324 ; PMID: 29106622
- Decrease of Arabidopsis PAO activity entails increased RBOH activity, ROS content and altered responses to Pseudomonas. DOI: 10.1016/j.plantsci.2019.110372 ; PMID: 32005378
- Photoperiod stress induces an oxidative burst-like response and is associated with increased apoplastic peroxidase and decreased catalase activities. DOI: 10.1016/j.jplph.2020.153252 ; PMID: 32949889
- An ER-Golgi Tethering Factor SLOH4/MIP3 Is Involved in Long-Term Heat Tolerance of Arabidopsis. DOI: 10.1093/pcp/pcaa157 ; PMID: 33367686
- Comparative Label-Free Quantitative Proteomics Analysis Reveals the Essential Roles of N-Glycans in Salt Tolerance by Modulating Protein Abundance in Arabidopsis. DOI: 10.3389/fpls.2021.646425 ; PMID: 34276718
- Organelle-targeted biosensors reveal distinct oxidative events during pattern-triggered immune responses. DOI: 10.1093/plphys/kiac603 ; PMID: 36582183
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VGZ7
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VGZ7
- EnsemblPlants: AT3G49120.1
- Gramene: AT3G49120.1
- KEGG: ath:AT3G49120
- Orthologous matrix: QCNFING
- ExpressionAtlas: AT3G49120
- InterPro: IPR000823, IPR002016, IPR010255
- PANTHER: PTHR31388, PTHR31388:SF141
- SUPFAM: SSF48113
- PROSITE: PS00435, PS00436, PS50873
- Gene3D: 1.10.420.10, 1.10.520.10
- SWISS-MODEL: A0A178VGZ7
- Conserved Domain Database: cd00693
Homologs
- Lactuca sativa Lsat_1_v5_gn_3_91640
- Oryza sativa OsPOX1;ddOs319, POXN;prx38, POXGX9;prx112, POX3006;prx114, OsPrx30, POXA;prx126, POX22.3, POX8.1;prx110, POX5.1;prx113
- Panicum virgatum Pavir.5NG033000
Sequences
cDNA Sequence
- >AT3G49120.1
AAAAGGAAACTATTCGTTTGCTGTTCTAGATAAAAGCCTTTAATTGAGAAAAAGAAAATGCCTCCAGCTTTGACCCGTTTTGCCTATAAAAGGATTCTCTAAGATATGGACTTTCCTCATCTTCTCGGGTAAACAGAATCAACTAGTTTTGTTTTTCCTCTTTCAAAAATGCATTTCTCTTCGTCTTCAACATCGTCCACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCATGCATCTTTGTCCGCTGCTCAACTCACCCCTACCTTCTACGATAGGTCATGTCCTAATGTCACTAACATCGTACGAGAAACCATTGTAAATGAGTTAAGGTCGGACCCTCGTATCGCTGCGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGTTGTGACGCATCCATCTTGTTAGACAACACGACATCATTTCGAACAGAGAAAGATGCGTTTGGAAACGCAAATTCGGCTCGGGGATTTCCAGTGATTGATAGAATGAAAGCTGCGGTGGAGAGGGCATGCCCAAGAACCGTTTCATGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGAAGGAGAGACAGTTTACAAGCATTCCTGGAACTCGCTAATGCAAATCTTCCAGCTCCATTCTTTACACTTCCACAACTTAAAGCCAGCTTCAGAAATGTTGGTCTCGATCGTCCTTCTGATCTCGTTGCTCTCTCCGGTGGTCACACATTTGGTAAAAATCAATGTCAGTTTATTCTTGACAGATTATACAATTTCAGCAACACAGGTTTACCCGACCCTACACTCAACACTACTTACCTCCAAACTCTTCGTGGACTATGCCCCCTTAATGGCAATCGAAGTGCCTTGGTAGATTTTGATCTACGTACGCCTACGGTTTTCGACAACAAATACTACGTGAATCTCAAAGAGCGAAAAGGTCTTATCCAGAGCGACCAAGAGTTGTTCTCTAGCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTTGTGGAGGCAATGAATAGGATGGGAAACATTACACCAACTACAGGAACTCAAGGACAAATCAGATTGAACTGTAGAGTTGTGAACTCCAACTCTCTGCTCCATGATGTGGTGGATATCGTTGACTTTGTTAGCTCTATGTGAGAATTGTTTACCCAATATGTGGCTACAAGAATACATATATATTAATGAATAAAACTCTCAAGACGTTTACTTGAGAACATTTATTTTAGTTCTCTCCTTTTCTAGAAGTGTATATACGCCACCACTAGGTGTCTCTCACTCAAGGAGAAGCAGATTTGTATTATTAAGCTCATTGCGCAGTTTGTGGCGGGGTATGGGAAGGTGTTTCAACGGGATTTGAAGGCGATAATTGTTAAGAGCCATGAGCAGTTTGACTTTTTGAAGCCAACTAATAGCAACTTCGGTCTTTTTA
CDS Sequence
- >AT3G49120.1
ATGCATTTCTCTTCGTCTTCAACATCGTCCACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCATGCATCTTTGTCCGCTGCTCAACTCACCCCTACCTTCTACGATAGGTCATGTCCTAATGTCACTAACATCGTACGAGAAACCATTGTAAATGAGTTAAGGTCGGACCCTCGTATCGCTGCGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGTTGTGACGCATCCATCTTGTTAGACAACACGACATCATTTCGAACAGAGAAAGATGCGTTTGGAAACGCAAATTCGGCTCGGGGATTTCCAGTGATTGATAGAATGAAAGCTGCGGTGGAGAGGGCATGCCCAAGAACCGTTTCATGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGAAGGAGAGACAGTTTACAAGCATTCCTGGAACTCGCTAATGCAAATCTTCCAGCTCCATTCTTTACACTTCCACAACTTAAAGCCAGCTTCAGAAATGTTGGTCTCGATCGTCCTTCTGATCTCGTTGCTCTCTCCGGTGGTCACACATTTGGTAAAAATCAATGTCAGTTTATTCTTGACAGATTATACAATTTCAGCAACACAGGTTTACCCGACCCTACACTCAACACTACTTACCTCCAAACTCTTCGTGGACTATGCCCCCTTAATGGCAATCGAAGTGCCTTGGTAGATTTTGATCTACGTACGCCTACGGTTTTCGACAACAAATACTACGTGAATCTCAAAGAGCGAAAAGGTCTTATCCAGAGCGACCAAGAGTTGTTCTCTAGCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTTGTGGAGGCAATGAATAGGATGGGAAACATTACACCAACTACAGGAACTCAAGGACAAATCAGATTGAACTGTAGAGTTGTGAACTCCAACTCTCTGCTCCATGATGTGGTGGATATCGTTGACTTTGTTAGCTCTATGTGA
Protein Sequence
- >AT3G49120.1
MHFSSSSTSSTWTILITLGCLMLHASLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHDVVDIVDFVSSM