Information report for AT3G49080
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005829 — located in — cytosol
- GO:0005739 — located in — mitochondrion
- GO:0005515 — enables — protein binding
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0009559 — acts upstream of or within — embryo sac central cell differentiation
- GO:0003723 — enables — RNA binding
- GO:0006412 — involved in — translation
- GO:0048229 — involved in — gametophyte development
- GO:0009555 — acts upstream of or within — pollen development
- GO:0003735 — enables — structural constituent of ribosome
- rps9m-1 — Reduced transmission through male and female gametophytes. Abnormal embryo sac development, particularly the central cell which fails to differentiate normally. Reduced fertility.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins. DOI: 10.1093/molbev/msj080 ; PMID: 16368778
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
Gene Resources
- UniProt: A0A5S9XJA2
- EMBL: CACSHJ010000089
- AlphaFoldDB: A0A5S9XJA2
- EnsemblPlants: AT3G49080.1
- Gramene: AT3G49080.1
- KEGG: ath:AT3G49080
- Orthologous matrix: WEETKRW
- ExpressionAtlas: AT3G49080
- InterPro: IPR000754, IPR014721, IPR020568
- PANTHER: PTHR21569, PTHR21569:SF1
- SUPFAM: SSF54211
- PROSITE: PS00360
- Gene3D: 3.30.230.10
- OrthoDB: A0A5S9XJA2
- SWISS-MODEL: A0A5S9XJA2
Homologs
- Oryza sativa WGL2
Sequences
cDNA Sequence
- >AT3G49080.1
GACTAAAACCGAACCGGTTCCTTAGTGTTAAGATTTCTAAAAAGAAAAACCCTAACCGTTCTTCTTCGAACTTCTGCAACTTTGTTTCTCCCAAATCTGTGAATCTCAAGTGTTCGTCTTCACCATCATGCTCTCTCGTTTATTCCTTAGACATTCGAATCTCCGTTTCGTAACCCTAGTTTCATCGAAATCAAATTCTCAGATCTTCTCTTCGTTTATTCGTCCGCTTTCGACTAACAGTAGCGGCGGCGGAGGAAATGGTGACGGGAATGGTCGTAATCGGAATGATGTTCCGTGGAGTTTCACTGGAGTAAACGATGATAAGTCTGGACCTTTCTCTTCCGATGATTCTTTTGGTTCTTCTGGAGTTGCAGGATCTGGTTTACCTGGTGGAGAGGGGAAATGGCCGGAGGAGCCTAAGAGATGGAATATAAAGGAGGAAGAGGAAAAAGTTGTGTTTGATACTGGTGGTGAAGTAGGTCAAGGGATTGAGACTAGTCGCGAGAGGAGGGGTAATGAATGGGAGGAGACTAAGAGATGGGATATGAAGGAGGGAGAGGAGAAAGTTGTGTTTGGTGGCGGAGGAGATGAGGTGGATGGGTTTGGAATCAGGGGAGAGGTGAAATCTAATGAATGGGATGTGTCAAAGCCATGGAATTTGAAAGAGGAAGAGGAGGGAGTTGTGTTTGATACTGGTGGTGAAGTGCCGTTTAGCTTTGAGAATAGCTTGGAAATGGCGGAGGAAGAGCGTGTGAAGAAGGAGTTGATTGAGAAGGAAGAGAAGGAGCTTCTTGAGGTTATCAAGGGTCCTGATCGAGCATTTGGAGACCTTATTGCTAAGTCAGGTATAACAGATGAAATGCTAGATAGTTTAATAGCCTTGAAAGATTTCCAAGGGGTCGAAGGATTACCTCCTCTGACTGAGATTGAAAACCTGCGTCGTGAGAAAAGTTCAAAGAAGTCATCAAGAGCTGAGATAGAACTCCAGATGCAAGAGGACATTGCCAAAGCACGGGTGAGACAAGTTGACGAAACAGGTAGAGCCTATGGAACTGGAAGAAGAAAATGTAGCATTGCACGTGTTTGGATTCAACCTGGGGAAGGAAAATTTCAAGTTAATGAAAAAGAATTTGATGTCTATTTCCCTATGCTTGATCATCGCGCTGCTCTTCTACGCCCACTTGCTGAAACCAAAACCTTGGGTCGTTGGGATATTAAGTGCACTGTTAAAGGCGGTGGTACTACAGGTCAAGTCGGAGCTATTCAATTGGGTATCAGCAGGGCACTGCAAAACTGGGAACCAGATATGCGGACATCACTTCGAGCTGCTGGTTTCTTGACAAGAGACTCTCGAGTTGTGGAAAGAAAGAAACCTGGAAAAGCCAAGGCAAGAAAGAGCTTCCAATGGGTCAAACGTTGAATCCGAAAATGCGTACTATATCTTCTCCTTTTTGTCTCTGTCATTTTCATTAGTTCGTCTACTTATCCCGGGTTTAGAAGAATCACCGGCAAATAACTTGTTCTTTTGGTTCAATCCCGTAGTTATCTTTTTGTACCAACACATTCTTCTCTTACGGCTCTACTCTTGGAAACTTGAGTTTCGTTGGTTTCTGAGTCGGACACATATTTTTGTATGTTTTTTTCCGGCAAATTGTCATGTTTCTTCAAAAGGTTCATTGATGTTTAAACATAATGATCAACTCCTTATATGGATTATATTATTAGGTGAATTTTGATTCTTTTGATCAAAATGTTAAGGAATGTCC
CDS Sequence
- >AT3G49080.1
ATGCTCTCTCGTTTATTCCTTAGACATTCGAATCTCCGTTTCGTAACCCTAGTTTCATCGAAATCAAATTCTCAGATCTTCTCTTCGTTTATTCGTCCGCTTTCGACTAACAGTAGCGGCGGCGGAGGAAATGGTGACGGGAATGGTCGTAATCGGAATGATGTTCCGTGGAGTTTCACTGGAGTAAACGATGATAAGTCTGGACCTTTCTCTTCCGATGATTCTTTTGGTTCTTCTGGAGTTGCAGGATCTGGTTTACCTGGTGGAGAGGGGAAATGGCCGGAGGAGCCTAAGAGATGGAATATAAAGGAGGAAGAGGAAAAAGTTGTGTTTGATACTGGTGGTGAAGTAGGTCAAGGGATTGAGACTAGTCGCGAGAGGAGGGGTAATGAATGGGAGGAGACTAAGAGATGGGATATGAAGGAGGGAGAGGAGAAAGTTGTGTTTGGTGGCGGAGGAGATGAGGTGGATGGGTTTGGAATCAGGGGAGAGGTGAAATCTAATGAATGGGATGTGTCAAAGCCATGGAATTTGAAAGAGGAAGAGGAGGGAGTTGTGTTTGATACTGGTGGTGAAGTGCCGTTTAGCTTTGAGAATAGCTTGGAAATGGCGGAGGAAGAGCGTGTGAAGAAGGAGTTGATTGAGAAGGAAGAGAAGGAGCTTCTTGAGGTTATCAAGGGTCCTGATCGAGCATTTGGAGACCTTATTGCTAAGTCAGGTATAACAGATGAAATGCTAGATAGTTTAATAGCCTTGAAAGATTTCCAAGGGGTCGAAGGATTACCTCCTCTGACTGAGATTGAAAACCTGCGTCGTGAGAAAAGTTCAAAGAAGTCATCAAGAGCTGAGATAGAACTCCAGATGCAAGAGGACATTGCCAAAGCACGGGTGAGACAAGTTGACGAAACAGGTAGAGCCTATGGAACTGGAAGAAGAAAATGTAGCATTGCACGTGTTTGGATTCAACCTGGGGAAGGAAAATTTCAAGTTAATGAAAAAGAATTTGATGTCTATTTCCCTATGCTTGATCATCGCGCTGCTCTTCTACGCCCACTTGCTGAAACCAAAACCTTGGGTCGTTGGGATATTAAGTGCACTGTTAAAGGCGGTGGTACTACAGGTCAAGTCGGAGCTATTCAATTGGGTATCAGCAGGGCACTGCAAAACTGGGAACCAGATATGCGGACATCACTTCGAGCTGCTGGTTTCTTGACAAGAGACTCTCGAGTTGTGGAAAGAAAGAAACCTGGAAAAGCCAAGGCAAGAAAGAGCTTCCAATGGGTCAAACGTTGA
Protein Sequence
- >AT3G49080.1
MLSRLFLRHSNLRFVTLVSSKSNSQIFSSFIRPLSTNSSGGGGNGDGNGRNRNDVPWSFTGVNDDKSGPFSSDDSFGSSGVAGSGLPGGEGKWPEEPKRWNIKEEEEKVVFDTGGEVGQGIETSRERRGNEWEETKRWDMKEGEEKVVFGGGGDEVDGFGIRGEVKSNEWDVSKPWNLKEEEEGVVFDTGGEVPFSFENSLEMAEEERVKKELIEKEEKELLEVIKGPDRAFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSSRAEIELQMQEDIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRVVERKKPGKAKARKSFQWVKR