Information report for AT3G48970
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005794 — located in — Golgi apparatus
- GO:0010073 — acts upstream of or within — meristem maintenance
Functional Keywords
Literature and News
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Transcriptome analysis of auxin-regulated genes of Arabidopsis thaliana. DOI: 10.1016/j.gene.2008.05.017 ; PMID: 18577427
- Heavy metal-associated isoprenylated plant protein (HIPP): characterization of a family of proteins exclusive to plants. DOI: 10.1111/febs.12159 ; PMID: 23368984
- Heavy Metal Stress-Associated Proteins in Rice and Arabidopsis: Genome-Wide Identification, Phylogenetics, Duplication, and Expression Profiles Analysis. DOI: 10.3389/fgene.2020.00477 ; PMID: 32457808
Gene Resources
- UniProt: A0A384LDW7
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A384LDW7
- EnsemblPlants: AT3G48970.2, AT3G48970.3
- Gramene: AT3G48970.2, AT3G48970.3
- ExpressionAtlas: AT3G48970
- InterPro: IPR006121, IPR036163
- PANTHER: PTHR22814, PTHR22814:SF319
- SUPFAM: SSF55008
- PROSITE: PS50846
- Gene3D: 3.30.70.100
- SWISS-MODEL: A0A384LDW7
Homologs
- Oryza sativa OsATX1
Sequences
cDNA Sequence
- >AT3G48970.3
ATAGACACACACACTTAGGAGACTTTGTGCACTGCTTCATTCTCTATAACCAAGTATAAGCTTGGAGGGGGTTATTTTTCTAAAAGGGATTGAGTTTTTAAGATCATGTCTCTGAAATGTGTGTTTGTAGATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAGTCTTTTAGTATACAAAAATATGTTTTCAGTTCATCTTCTTCGTCCAAATTTGATTTGATGTGATTTTTTTTGTACAACTAATGTTGGAATGAGAAAGTAAAATATATATGTTGTGTTTTAGTCTGAATAAATTGGATC - >AT3G48970.1
ATAGACACACACACTTAGGAGACTTTGTGCACTGCTTCATTCTCTATAACCAAGTATAAGCTTGGAGGGGGTTATTTTTCTAAAAGGGATTGAGTTTTTAAGATCATGTCTCTGAAATGTGTGTTTGTAGATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAGTCTTTTAGTATACAAAAATATGTTTTCAGTTCATCTTCTTCGTCCAAATTTGATTTGATGTGATTTTTTTTGTACAACTAATGTTGGAATGAGAAAGTAAAATATATATGTTGTGTTTTAGTCTGAATAAATTGGATC - >AT3G48970.2
ATAGACACACACACTTAGGAGACTTTGTGCACTGCTTCATTCTCTATAACCAAGTATAAGCTTGGAGGGGGTTATTTTTCTAAAAGGGATTGAGTTTTTAAGATCATGTCTCTGAAATGTGTGTTTGTAGATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAGTCTTTTAGTATACAAAAATATGTTTTCAGTTCATCTTCTTCGTCCAAATTTGATTTGATGTGATTTTTTTTGTACAACTAATGTTGGAATGAGAAAGTAAAATATATATGTTGTGTTTTAGTCTGAATAAATTGGATC
CDS Sequence
- >AT3G48970.3
ATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAG - >AT3G48970.1
ATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAG - >AT3G48970.2
ATGACAGTGGAGATAAGAGTTCCAAACTTGGATTGTGAAGGATGTGCTTCTAAGCTTAGGAAGACTCTACTCAAGCTTAAAGGAGTGGAAGAAGTGGAAGTAGAGATGGAAACCCAAAAAGTGACGGCTCGAGGATACCGGTTAGAGGAAAAGAAGGTATTGAAAGCGGTACGACGTGCCGGTAAGGCAGCTGAACTGTGGCCATACCGGTTAGGTAATAGCCATTTTGCCTCTTTCTATAAATATCCTTCTTACGTGACCAACCACTATTACTCTGATGCACACCGTACGGATCCCACCGGTGGTGTCCACACTTTCTTCCACACTCCCGCGGATTACTCGGTTGCTGTGGCTGGAGATGAGATCGCGGCTTCGATGTTTAGCGATGATAATCCCCATGCTTGTACTATTATGTAG
Protein Sequence
- >AT3G48970.3
MTVEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPYRLGNSHFASFYKYPSYVTNHYYSDAHRTDPTGGVHTFFHTPADYSVAVAGDEIAASMFSDDNPHACTIM - >AT3G48970.1
MTVEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPYRLGNSHFASFYKYPSYVTNHYYSDAHRTDPTGGVHTFFHTPADYSVAVAGDEIAASMFSDDNPHACTIM - >AT3G48970.2
MTVEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPYRLGNSHFASFYKYPSYVTNHYYSDAHRTDPTGGVHTFFHTPADYSVAVAGDEIAASMFSDDNPHACTIM