Gene Details:
- Gene ID: AT3G48950
- Gene Symbol: PGF7
- Gene Name: Polygalacturonase Clade F 7
- Description: Pectin lyase-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2101313
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Gene Ontology:
- GO:0005975 — involved in — carbohydrate metabolic process
- GO:0004650 — enables — polygalacturonase activity
- GO:0009507 — located in — chloroplast
Function-related keywords:
Literature:
- Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. DOI: 10.1104/pp.105.067314 ; PMID: 16299181
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Identification of genes expressed in the Arabidopsis female gametophyte. DOI: 10.1111/j.1365-313X.2007.03137.x ; PMID: 17559508
- Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte. DOI: 10.1186/gb-2007-8-10-r204 ; PMID: 17915010
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles. DOI: 10.1371/journal.pone.0046944 ; PMID: 23056537
- Biochemical characterization of Arabidopsis clade F polygalacturonase shows a substrate preference toward oligogalacturonic acids. DOI: 10.1016/j.jbiosc.2021.08.007 ; PMID: 34690060
Sequences:
cDNA Sequence
- >AT3G48950.1
AAACCAGAAGGAAGACATATTCCTCTGTTTAAAAATATCTTAAGATGATTAGACCAACGTTTGGTTTACTAGTCTTTTTGGCTATATTCCTTTTTCCGGCGATTGAATCCCGGAGTCACCGAAATTCGGTGACTTCCAAGATTGAATTTTCAGCGCTGAATTGCCGGAAACATAGTGCAATACTGACTGATTTTGGTGCGGTTGGAGATGGAAAAACTTCTAATACAAAAGCGTTTAGAAATGCCATAAGCAAGCTCAGCCAAATGGCAACCGATGGCGGAGCTCAACTCGTAGTACCTCCCGGAAAATGGCTTACCGGAAGTTTTAACCTTACAAGCCATTTCACTTTGTTCATCCAGCGAGGTGCTACCATCCTTGCATCTCAGGATGAATCTGAATGGCCAGTTATCGCTCCATTGCCATCGTACGGGAAAGGAAGAGACGGAACCGGAACCGGGAGATTCAACAGTCTCATCTCCGGTACAAACCTAACCGACGTGGTTATCACTGGTAACAACGGAACGATCAACGGACAGGGACAGTATTGGTGGGACAAATTCAAGAAGAAGCAGTTCAAAATAACAAGACCGTACTTGATCGAGATCTTGTTCTCCAAAAACATTCAAATCTCGAACATCACATTGATCGATTCGCCGTCGTGGAATATTCATCCTGTCTATTGTAATAGCGTCATTGTCAAATCCGTCACCGTTCTTGCTCCCGTCACTGTTCCCAACACCGACGGTATCAATCCAGATTCTTGCACAAACACATTGATCGAAGACTGTTACATAGTCTCCGGAGACGACTGCATCGCCGTCAAAAGCGGTTGGGACCAATACGGAATCAAATTCGGAATGCCGACGCAGCAACTCTCGATCCGACGGCTGACATGCATCTCCCCAAAGAGTGCAGGAGTAGCCTTAGGAAGTGAAATGTCCGGAGGAATCAAAGACGTTAGAATCGAAGATGTAACTCTAACCAACACCGAATCCGCCATCCGAATCAAAACTGCGGTGGGACGTGGCGCTTACGTCAAGGATATTTACGCTAGGAGGATCACAATGAAGACGATGAAATATGTTTTCTGGATGAGTGGAAACTACGGTAGTCATCCTGACGAAGGATTTGATCCCAAGGCGTTGCCGGAAATTACTAATATCAATTACCGCGATATGACGGCGGAGAATGTTACAATGTCAGCGAGTCTCGACGGGATTGATAAAGATCCGTTTACGGGTATTTGTATCTCGAATGTGACTATAGCTTTGGCGGCTAAGGCTAAGAAAATGCAGTGGAATTGTACAGATGTGGCTGGAGTTACCAGCAGAGTTACGCCAGAGCCATGTAGTTTGTTGCCTGAGAAGAAAGCTCAGGCGAAGAATGTTGACTGTGCGTTTCCGTCTGATTTGATTCCGATTGAGAGTGTTGTATTGAAGAAGTGCTTTCTTTGACGTAGTATAGTGATATTAACAGATTAAGATGCATTAATACTTTATATGAAATTTCATTATAATGAAATAAG
CDS Sequence
- >AT3G48950.1
ATGATTAGACCAACGTTTGGTTTACTAGTCTTTTTGGCTATATTCCTTTTTCCGGCGATTGAATCCCGGAGTCACCGAAATTCGGTGACTTCCAAGATTGAATTTTCAGCGCTGAATTGCCGGAAACATAGTGCAATACTGACTGATTTTGGTGCGGTTGGAGATGGAAAAACTTCTAATACAAAAGCGTTTAGAAATGCCATAAGCAAGCTCAGCCAAATGGCAACCGATGGCGGAGCTCAACTCGTAGTACCTCCCGGAAAATGGCTTACCGGAAGTTTTAACCTTACAAGCCATTTCACTTTGTTCATCCAGCGAGGTGCTACCATCCTTGCATCTCAGGATGAATCTGAATGGCCAGTTATCGCTCCATTGCCATCGTACGGGAAAGGAAGAGACGGAACCGGAACCGGGAGATTCAACAGTCTCATCTCCGGTACAAACCTAACCGACGTGGTTATCACTGGTAACAACGGAACGATCAACGGACAGGGACAGTATTGGTGGGACAAATTCAAGAAGAAGCAGTTCAAAATAACAAGACCGTACTTGATCGAGATCTTGTTCTCCAAAAACATTCAAATCTCGAACATCACATTGATCGATTCGCCGTCGTGGAATATTCATCCTGTCTATTGTAATAGCGTCATTGTCAAATCCGTCACCGTTCTTGCTCCCGTCACTGTTCCCAACACCGACGGTATCAATCCAGATTCTTGCACAAACACATTGATCGAAGACTGTTACATAGTCTCCGGAGACGACTGCATCGCCGTCAAAAGCGGTTGGGACCAATACGGAATCAAATTCGGAATGCCGACGCAGCAACTCTCGATCCGACGGCTGACATGCATCTCCCCAAAGAGTGCAGGAGTAGCCTTAGGAAGTGAAATGTCCGGAGGAATCAAAGACGTTAGAATCGAAGATGTAACTCTAACCAACACCGAATCCGCCATCCGAATCAAAACTGCGGTGGGACGTGGCGCTTACGTCAAGGATATTTACGCTAGGAGGATCACAATGAAGACGATGAAATATGTTTTCTGGATGAGTGGAAACTACGGTAGTCATCCTGACGAAGGATTTGATCCCAAGGCGTTGCCGGAAATTACTAATATCAATTACCGCGATATGACGGCGGAGAATGTTACAATGTCAGCGAGTCTCGACGGGATTGATAAAGATCCGTTTACGGGTATTTGTATCTCGAATGTGACTATAGCTTTGGCGGCTAAGGCTAAGAAAATGCAGTGGAATTGTACAGATGTGGCTGGAGTTACCAGCAGAGTTACGCCAGAGCCATGTAGTTTGTTGCCTGAGAAGAAAGCTCAGGCGAAGAATGTTGACTGTGCGTTTCCGTCTGATTTGATTCCGATTGAGAGTGTTGTATTGAAGAAGTGCTTTCTTTGA
Protein Sequence
- >AT3G48950.1
MIRPTFGLLVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKCFL