Gene Details:
- Gene ID: AT3G48540
- Gene Symbol: DCD
- Gene Name: DEOXYCYTIDINE MONOPHOSPHATE DEAMINASE
- Description: Cytidine/deoxycytidylate deaminase family protein;(source:Araport11)
- TAIR Accession: locus:2114490
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0019219 — acts upstream of or within — regulation of nucleobase-containing compound metabolic process
- GO:0009507 — located in — chloroplast
- GO:0016787 — enables — hydrolase activity
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0008270 — enables — zinc ion binding
- GO:0005739 — located in — mitochondrion
Germplasm Phenotype:
- dcd-1 — No obvious morphological phenotype. Accumula tion of dCTP and a reduction of dTMP was detected in the dcd mutant compared to the wild-type.
Literature:
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- The nucleotide metabolome of germinating Arabidopsis thaliana seeds reveals a central role for thymidine phosphorylation in chloroplast development. DOI: 10.1093/plcell/koac207 ; PMID: 35861422
Sequences:
cDNA Sequence
- >AT3G48540.1
GTTTTATCGATTTTGAAGCTCCCCATGAACTCTCGAGATCTTACACTCGTCTCTACATCTGCAATCTTCGGTGCTTTGATTTCAGCTCTAGCATTTCGCTTCTTCTCATCAAACCCTAAAAACCCCAAATCCCGAAAATTCACTTCCACCGAAATCTCTGCAATTTCCAGAAAATTCCCTGCTCTAGATCCTTTCAGTCCTTTGAAACGAAATGGGTACTTATCATGGGATGATTATTTCATGGCGATTGCATTCCTTTCTGCAGAACGATCCAAGGATCCTAACAGGCAGGTTGGCGCATGTTTGGTGAGCCAAAATGGTGTAATCCTTGGGATTGGCTATAATGGTTTTCCAAGAGGCTGCTCTGATGACAAACTTCCTTGGGCCAAGAAATCAAGAACTGGGGACCCATTAGAGACCAAGTATCCATATGTTTGTCACGCTGAAGTCAATGCCATACTAAACACAAACCACGCATCGGCGGCTGGCCAGAAGCTTTATGTGACAATGTTCCCTTGCAATGAATGTGCCAAGATTATTTTACAGTCTGGTGTTGCTGAGGTAATCTATTTTGTGGAAAAGAGACCAAATGACTCAGATGTTGCCTATGTAGCTTCTCACAAGCTCTTATCCATGGCAAACGTCAAAGTCAGGAAACATCAACCAGAGATGGATGAGATCTTGATCAAGTTCGAAGAACACTTACTCCAACCAGAGACCTAA
CDS Sequence
- >AT3G48540.1
ATGAACTCTCGAGATCTTACACTCGTCTCTACATCTGCAATCTTCGGTGCTTTGATTTCAGCTCTAGCATTTCGCTTCTTCTCATCAAACCCTAAAAACCCCAAATCCCGAAAATTCACTTCCACCGAAATCTCTGCAATTTCCAGAAAATTCCCTGCTCTAGATCCTTTCAGTCCTTTGAAACGAAATGGGTACTTATCATGGGATGATTATTTCATGGCGATTGCATTCCTTTCTGCAGAACGATCCAAGGATCCTAACAGGCAGGTTGGCGCATGTTTGGTGAGCCAAAATGGTGTAATCCTTGGGATTGGCTATAATGGTTTTCCAAGAGGCTGCTCTGATGACAAACTTCCTTGGGCCAAGAAATCAAGAACTGGGGACCCATTAGAGACCAAGTATCCATATGTTTGTCACGCTGAAGTCAATGCCATACTAAACACAAACCACGCATCGGCGGCTGGCCAGAAGCTTTATGTGACAATGTTCCCTTGCAATGAATGTGCCAAGATTATTTTACAGTCTGGTGTTGCTGAGGTAATCTATTTTGTGGAAAAGAGACCAAATGACTCAGATGTTGCCTATGTAGCTTCTCACAAGCTCTTATCCATGGCAAACGTCAAAGTCAGGAAACATCAACCAGAGATGGATGAGATCTTGATCAAGTTCGAAGAACACTTACTCCAACCAGAGACCTAA
Protein Sequence
- >AT3G48540.1
MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRKFTSTEISAISRKFPALDPFSPLKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKRPNDSDVAYVASHKLLSMANVKVRKHQPEMDEILIKFEEHLLQPET