Gene Details:
- Gene ID: AT3G48460
- Gene Symbol: SFAR4
- Gene Name: SEED FATTY ACID REDUCER 4
- Description: GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- SALK_008418C — Expansion and greening of cotyledons inhibited by glucose. Hypersensitive to glucose.
- SALK_122440C — Expansion and greening of cotyledons inhibited by glucose. Hypersensitive to glucose.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Comparative analysis of expressed sequence tags from Sesamum indicum and Arabidopsis thaliana developing seeds. DOI: 10.1023/b:plan.0000004304.22770.e9 ; PMID: 14682612
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Arabidopsis SFAR4 is a novel GDSL-type esterase involved in fatty acid degradation and glucose tolerance. DOI: 10.1186/s40529-015-0114-6 ; PMID: 28510842
- Genome-wide analysis of GDSL-type esterases/lipases in Arabidopsis. DOI: 10.1007/s11103-017-0648-y ; PMID: 28840447
- Expression Pattern and Functional Analyses of Arabidopsis Guard Cell-Enriched GDSL Lipases. DOI: 10.3389/fpls.2021.748543 ; PMID: 34621289
Sequences:
cDNA Sequence
- >AT3G48460.1
GTTTATTCTCACCACTACATGTATATAACACAACCATTTTCATTAGAAGCTCAAATTTCAAATCTCACTTCCTTATCACAATGTCTTCCTCTATCTCTCCCCTCCTCACAACCGCCATCTCCGTCGCAATCCTCCTCTTCTCCACCATCTCCACAGCGGCGACAATTCCAAACATCCACCGTCCATTCAACAAAATCTACGCCTTCGGAGATTCTTTCACCGACACCGGAAACTCACGCTCCGGCGAAGGACCAGCCGGATTCGGACACTTGTCAAGTCCTCCATACGGCATGACTTTCTTCCGACGACCAACAAACCGTTACTCCGACGGTCGTCTAACCATCGACTTCGTGGCAGAGTCAATGAATTTACCGTTTCTGCCACCGTATCTCAGCCTCAAAACCACTAACGCTAACGGCACAGCAACGGATACTCACGGCGTTAATTTCGCTGTCTCTGGATCAACGGTGATTAAACACGCGTTTTTCGTCAAGAACAATCTGTCGCTTGATATGACTCCTCAGTCTATAGAAACAGAGCTTGCTTGGTTTGAGAAGTACTTGGAGACACTTGGAACGAATCAGAAGGTTTCGTTGTTTAAAGATTCTCTCTTTTGGATTGGAGAAATTGGAGTGAATGATTATGCGTATACCCTTGGATCTACTGTGTCAAGTGACACCATTAGAGAACTTAGTATCTCAACTTTTACAAGGTTTTTGGAGACATTGTTGAACAAAGGTGTGAAATATATGTTGGTGCAAGGACATCCAGCAACTGGATGCTTAACGTTAGCAATGTCGTTGGCCGCAGAAGATGATCGGGACAGTCTAGGATGTGTGCAGAGTGCCAATAACCAAAGTTACACTCACAATCTTGCCCTTCAATCCAAACTTAAACAACTTAGGATCAAGTATCCGAGTGCCACAATAGTCTACGCAGATTACTGGAACGCGTACCGTGCGGTGATTAAACACCCTAGCAAGTACGGTATCACCGAGAAGTTCAAGGCGTGTTGTGGAATTGGAGAGCCGTACAACTTCCAAGTGTTCCAAACGTGTGGGACGGATGCAGCTACAGTGTGTAAGGACCCGAATCAATACATCAATTGGGACGGAGTCCACTTGACCGAGGCTATGTATAAGGTTATGGCCGATATGTTCCTTGACGGCACTTTCACTCGTCCTAGATTTAGTGACTTGTTGATCAAGAAACTAAACTATTTATGAATGAATTGTTTTACTGATTTTTTATATAAGATTTAATGGTTTTGGAGTTTTTTTTTAATAAACATTATTGGATTTTTTTATCTGAAGCCTAAGAAATTTTATGTTCGGCGCTTAAATCACACAAGTCATAATAATTTAACTAAGGTCTGAGATCCTTGGATTATCAAA
CDS Sequence
- >AT3G48460.1
ATGTCTTCCTCTATCTCTCCCCTCCTCACAACCGCCATCTCCGTCGCAATCCTCCTCTTCTCCACCATCTCCACAGCGGCGACAATTCCAAACATCCACCGTCCATTCAACAAAATCTACGCCTTCGGAGATTCTTTCACCGACACCGGAAACTCACGCTCCGGCGAAGGACCAGCCGGATTCGGACACTTGTCAAGTCCTCCATACGGCATGACTTTCTTCCGACGACCAACAAACCGTTACTCCGACGGTCGTCTAACCATCGACTTCGTGGCAGAGTCAATGAATTTACCGTTTCTGCCACCGTATCTCAGCCTCAAAACCACTAACGCTAACGGCACAGCAACGGATACTCACGGCGTTAATTTCGCTGTCTCTGGATCAACGGTGATTAAACACGCGTTTTTCGTCAAGAACAATCTGTCGCTTGATATGACTCCTCAGTCTATAGAAACAGAGCTTGCTTGGTTTGAGAAGTACTTGGAGACACTTGGAACGAATCAGAAGGTTTCGTTGTTTAAAGATTCTCTCTTTTGGATTGGAGAAATTGGAGTGAATGATTATGCGTATACCCTTGGATCTACTGTGTCAAGTGACACCATTAGAGAACTTAGTATCTCAACTTTTACAAGGTTTTTGGAGACATTGTTGAACAAAGGTGTGAAATATATGTTGGTGCAAGGACATCCAGCAACTGGATGCTTAACGTTAGCAATGTCGTTGGCCGCAGAAGATGATCGGGACAGTCTAGGATGTGTGCAGAGTGCCAATAACCAAAGTTACACTCACAATCTTGCCCTTCAATCCAAACTTAAACAACTTAGGATCAAGTATCCGAGTGCCACAATAGTCTACGCAGATTACTGGAACGCGTACCGTGCGGTGATTAAACACCCTAGCAAGTACGGTATCACCGAGAAGTTCAAGGCGTGTTGTGGAATTGGAGAGCCGTACAACTTCCAAGTGTTCCAAACGTGTGGGACGGATGCAGCTACAGTGTGTAAGGACCCGAATCAATACATCAATTGGGACGGAGTCCACTTGACCGAGGCTATGTATAAGGTTATGGCCGATATGTTCCTTGACGGCACTTTCACTCGTCCTAGATTTAGTGACTTGTTGATCAAGAAACTAAACTATTTATGA
Protein Sequence
- >AT3G48460.1
MSSSISPLLTTAISVAILLFSTISTAATIPNIHRPFNKIYAFGDSFTDTGNSRSGEGPAGFGHLSSPPYGMTFFRRPTNRYSDGRLTIDFVAESMNLPFLPPYLSLKTTNANGTATDTHGVNFAVSGSTVIKHAFFVKNNLSLDMTPQSIETELAWFEKYLETLGTNQKVSLFKDSLFWIGEIGVNDYAYTLGSTVSSDTIRELSISTFTRFLETLLNKGVKYMLVQGHPATGCLTLAMSLAAEDDRDSLGCVQSANNQSYTHNLALQSKLKQLRIKYPSATIVYADYWNAYRAVIKHPSKYGITEKFKACCGIGEPYNFQVFQTCGTDAATVCKDPNQYINWDGVHLTEAMYKVMADMFLDGTFTRPRFSDLLIKKLNYL