Gene Details:
- Gene ID: AT3G48450
- Gene Symbol: NOI5
- Gene Name:
- Description: RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- root , sepal , flower , hypocotyl , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response. DOI: 10.1105/tpc.104.024315 ; PMID: 15539473
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Characterization of a NADH-dependent glutamate dehydrogenase mutant of Arabidopsis demonstrates the key role of this enzyme in root carbon and nitrogen metabolism. DOI: 10.1105/tpc.112.103689 ; PMID: 23054470
- Comparative and evolutionary analysis of Arabidopsis RIN4-like/NOI proteins induced by herbivory. DOI: 10.1371/journal.pone.0270791 ; PMID: 36166429
Sequences:
cDNA Sequence
- >AT3G48450.2
ATTATTGATAGAAATACTGAATAGGGTAGGTGGAAAAGGCAAGAACTATTGGCATGATCCACGTTTTTAGTCTTTTTGCTCTCTATGACTTTTTTCTTCATTTTGAATTTACTAAAATAATATTAGGTATTTCTGTTGGGAAAGCCGCGGGAAGGAAGAAAGATTTTGGATATTTCCTCGTATCGGATTCGAAATCCTCTGTTTCTAATTCCAACAATGGCAACGGGAAATAGAGCGAGACCATTGCCAAAATTTGGGGAATGGGATGCGACTAATCCTGGCTCGGCTGAAGGATTCACTGTCATTTTCAATAAAGCTCGCGATGACAAGAAGACGATGAAAACCGCTGTCGCAGGACCTGAGAGTATTGTTTCACCTCCAAGAAATGAAGAACCTCCTAAAAACAACAACAACCATCATCACAACCATCACACCCGTCATTCCCAAACCCCAAGATCAAAGAAGAAATGGCTTTGTTTTCGTTAACTCTGGTATTGGCTCTGTTCTGAGAAAACCCGACGACAAGCAAGCAGAATCGTGGAGCGAGTAATCTCCAACAGATTATAGCGACCAAACCAGTGATCATCTAAGATGTTGTTGCAAACTTCTCTTCTTCTTATTGCTCGTTGAGTTTCTTTCTCTTTTGTTTTGGACACATTTGGGTATATGAATATACGTTTTTCTTGATGATTCTTAGTTTCATAAGTATATATAAAGATTGAGACATGTTCTTTG - >AT3G48450.1
ATTATTGATAGAAATACTGAATAGGGTAGGTGGAAAAGGCAAGAACTATTGGCATGATCCACGTTTTTAGTCTTTTTGCTCTCTATGACTTTTTTCTTCATTTTGAATTTACTAAAATAATATTAGGTATTTCTGTTGGGAAAGCCGCGGGAAGGAAGAAAGATTTTGGATATTTCCTCGTATCGGATTCGAAATCCTCTGTTTCTAATTCCAACAATGGCAACGGGAAATAGAGCGAGACCATTGCCAAAATTTGGGGAATGGGATGCGACTAATCCTGGCTCGGCTGAAGGATTCACTGTCATTTTCAATAAAGCTCGCGATGACAAGAAGACGATGAAAACCGCTGTCGCAGGACCTGAGAGTATTGTTTCACCTCCAAGAAATGAAGAACCTCCTAAAAACAACAACAACCATCATCACAACCATCACACCCGTCATTCCCAAACCCCAAGATCAAAGAAGAAATGGCTTTGTTTTCGTTAACTCTGGTATTGGCTCTGTTCTGAGAAAACCCGACGACAAGCAAGCAGAATCGTGGAGCGAGTAATCTCCAACAGATTATAGCGACCAAACCAGTGATCATCTAAGATGTTGTTGCAAACTTCTCTTCTTCTTATTGCTCGTTGAGTTTCTTTCTCTTTTGTTTTGGACACATTTGGGTATATGAATATACGTTTTTCTTGATGATTCTTAGTTTCATAAGTATATATAAAGATTGAGACATGTTCTTTG
CDS Sequence
- >AT3G48450.2
ATGGCAACGGGAAATAGAGCGAGACCATTGCCAAAATTTGGGGAATGGGATGCGACTAATCCTGGCTCGGCTGAAGGATTCACTGTCATTTTCAATAAAGCTCGCGATGACAAGAAGACGATGAAAACCGCTGTCGCAGGACCTGAGAGTATTGTTTCACCTCCAAGAAATGAAGAACCTCCTAAAAACAACAACAACCATCATCACAACCATCACACCCGTCATTCCCAAACCCCAAGATCAAAGAAGAAATGGCTTTGTTTTCGTTAA - >AT3G48450.1
ATGGCAACGGGAAATAGAGCGAGACCATTGCCAAAATTTGGGGAATGGGATGCGACTAATCCTGGCTCGGCTGAAGGATTCACTGTCATTTTCAATAAAGCTCGCGATGACAAGAAGACGATGAAAACCGCTGTCGCAGGACCTGAGAGTATTGTTTCACCTCCAAGAAATGAAGAACCTCCTAAAAACAACAACAACCATCATCACAACCATCACACCCGTCATTCCCAAACCCCAAGATCAAAGAAGAAATGGCTTTGTTTTCGTTAA
Protein Sequence
- >AT3G48450.2
MATGNRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNNNNHHHNHHTRHSQTPRSKKKWLCFR - >AT3G48450.1
MATGNRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNNNNHHHNHHTRHSQTPRSKKKWLCFR