Information report for AT3G48340
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0000027 — lateral root tip — punta de la raíz lateral (Spanish, exact), 側根端 (Japanese, exact)
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0020121 — lateral root — raíz lateral (Spanish, exact), 側根 (Japanese, exact)
- GO:0004197 — enables — cysteine-type endopeptidase activity
- GO:0005764 — is active in — lysosome
- GO:0005576 — located in — extracellular region
- GO:0051603 — involved in — proteolysis involved in protein catabolic process
- GO:0005615 — is active in — extracellular space
Functional Keywords
- cauline leaf , rosette leaf , lateral root tip , trichome , fruit , root , flower , stem , lateral root
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- The S8 serine, C1A cysteine and A1 aspartic protease families in Arabidopsis. DOI: 10.1016/j.phytochem.2003.09.005 ; PMID: 14697270
- Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. DOI: 10.1186/1471-2164-14-701 ; PMID: 24119003
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
Gene Resources
- UniProt: A0A178VA93
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VA93
- EnsemblPlants: AT3G48340.1
- Gramene: AT3G48340.1
- KEGG: ath:AT3G48340
- Orthologous matrix: GKCDASK
- ExpressionAtlas: AT3G48340
- InterPro: IPR000169, IPR000668, IPR013128
- PANTHER: PTHR12411
- SUPFAM: SSF54001
- PROSITE: PS00139, PS00639, PS00640
- Gene3D: 3.90.70.10
- OrthoDB: A0A178VA93
- SWISS-MODEL: A0A178VA93
- Conserved Domain Database: cd02248
Homologs
- Actinidia chinensis Achn182291
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XCJ8AH
- Hordeum vulgare HvPAP14
- Medicago truncatula Medtr7g078630
- Oryza sativa OsSAG12-2, REP-1;OsEP3A, OsCP1, OsSAG12, OCP
Sequences
cDNA Sequence
- >AT3G48340.1
AATATGATGGGTTCCTTATTCCTCTCAAATGCGTGTCCTAGAAGTTCCACAAGTCTAACCAAGACGTATACACAATGATACACAATAATAATTCATTTTCCAAACGTTGATGGTATTTGAGTAATTTCAAATCTCTACAGAAAAATATTTCTCTTTCCCTATATATATCCGATACCATCTCATTGCACTTTCAACCTCAAACAAATAACCAATCAACCAAAAAAAAAAAAAAAATGAAGAAACTTCTTTTGATATTTCTCTTTTCTCTTGTCATTCTCCAAACTGCTTGTGGATTCGATTACGACGACAAGGAAATAGAAAGCGAAGAGGGCTTATCAACGCTTTATGATAGATGGAGGAGCCACCACTCCGTTCCTAGGAGTCTAAATGAAAGGGAGAAGAGATTCAACGTTTTCAGACACAATGTCATGCATGTCCACAATACCAACAAGAAGAACCGATCCTACAAACTTAAGCTCAACAAGTTTGCAGATTTAACAATTAATGAGTTCAAGAATGCATACACCGGTTCCAACATCAAGCATCACAGAATGTTGCAAGGACCAAAACGCGGCTCAAAACAGTTCATGTATGATCATGAGAATTTATCCAAATTACCGTCCTCCGTTGATTGGAGAAAGAAAGGTGCTGTCACTGAAATCAAGAATCAAGGAAAATGTGGAAGTTGTTGGGCATTCTCTACCGTAGCAGCTGTTGAGGGAATCAACAAGATCAAGACTAACAAACTGGTCTCACTGTCTGAACAAGAACTAGTGGATTGTGATACTAAGCAGAATGAAGGTTGTAACGGAGGTCTTATGGAGATTGCATTTGAATTCATCAAGAAGAACGGTGGTATCACCACTGAAGATAGCTATCCTTATGAAGGTATCGATGGAAAATGCGACGCTTCAAAGGATAACGGCGTGCTTGTGACGATAGATGGGCATGAAGATGTACCCGAAAACGACGAAAATGCTCTTCTTAAGGCTGTTGCAAACCAACCTGTATCTGTTGCAATTGATGCTGGAAGTTCAGATTTCCAGTTTTATTCAGAGGGAGTGTTTACGGGATCTTGTGGAACAGAGCTGAACCATGGTGTGGCAGCGGTCGGGTATGGATCTGAGAGGGGGAAAAAGTATTGGATAGTGAGAAACTCATGGGGAGCTGAATGGGGAGAGGGAGGCTATATAAAGATTGAAAGAGAGATTGATGAACCGGAAGGGCGTTGCGGTATTGCGATGGAGGCATCGTATCCGATCAAGCTATCGTCGTCTAATCCTACCCCGAAAGACGGTGATGTCAAAGATGAGCTCTAGATATGTGTACACATTGTGTAAAACCATATCAAAGGTGATCCCAATTCCTTGTTGATTCATGTTGTTAGTTTCGTCTTCATGATTTGATTTTGTTGTTGGTTTTGAATTTGAATAAAAATGTCTCGTGTTTTCTCAATCCTTTGTTTATTAATTATGTACAAGAGAGCAATAAGACACTTTTGGCGAATAAGTTTTCATTTAACACTACAGCGTTTGTGTTTTAGACGCACCAAACGCAATAGTTTGAGTATTACACTATTACTATCGAGATGTGAGG
CDS Sequence
- >AT3G48340.1
ATGAAGAAACTTCTTTTGATATTTCTCTTTTCTCTTGTCATTCTCCAAACTGCTTGTGGATTCGATTACGACGACAAGGAAATAGAAAGCGAAGAGGGCTTATCAACGCTTTATGATAGATGGAGGAGCCACCACTCCGTTCCTAGGAGTCTAAATGAAAGGGAGAAGAGATTCAACGTTTTCAGACACAATGTCATGCATGTCCACAATACCAACAAGAAGAACCGATCCTACAAACTTAAGCTCAACAAGTTTGCAGATTTAACAATTAATGAGTTCAAGAATGCATACACCGGTTCCAACATCAAGCATCACAGAATGTTGCAAGGACCAAAACGCGGCTCAAAACAGTTCATGTATGATCATGAGAATTTATCCAAATTACCGTCCTCCGTTGATTGGAGAAAGAAAGGTGCTGTCACTGAAATCAAGAATCAAGGAAAATGTGGAAGTTGTTGGGCATTCTCTACCGTAGCAGCTGTTGAGGGAATCAACAAGATCAAGACTAACAAACTGGTCTCACTGTCTGAACAAGAACTAGTGGATTGTGATACTAAGCAGAATGAAGGTTGTAACGGAGGTCTTATGGAGATTGCATTTGAATTCATCAAGAAGAACGGTGGTATCACCACTGAAGATAGCTATCCTTATGAAGGTATCGATGGAAAATGCGACGCTTCAAAGGATAACGGCGTGCTTGTGACGATAGATGGGCATGAAGATGTACCCGAAAACGACGAAAATGCTCTTCTTAAGGCTGTTGCAAACCAACCTGTATCTGTTGCAATTGATGCTGGAAGTTCAGATTTCCAGTTTTATTCAGAGGGAGTGTTTACGGGATCTTGTGGAACAGAGCTGAACCATGGTGTGGCAGCGGTCGGGTATGGATCTGAGAGGGGGAAAAAGTATTGGATAGTGAGAAACTCATGGGGAGCTGAATGGGGAGAGGGAGGCTATATAAAGATTGAAAGAGAGATTGATGAACCGGAAGGGCGTTGCGGTATTGCGATGGAGGCATCGTATCCGATCAAGCTATCGTCGTCTAATCCTACCCCGAAAGACGGTGATGTCAAAGATGAGCTCTAG
Protein Sequence
- >AT3G48340.1
MKKLLLIFLFSLVILQTACGFDYDDKEIESEEGLSTLYDRWRSHHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNRSYKLKLNKFADLTINEFKNAYTGSNIKHHRMLQGPKRGSKQFMYDHENLSKLPSSVDWRKKGAVTEIKNQGKCGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVDCDTKQNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGIDGKCDASKDNGVLVTIDGHEDVPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTGSCGTELNHGVAAVGYGSERGKKYWIVRNSWGAEWGEGGYIKIEREIDEPEGRCGIAMEASYPIKLSSSNPTPKDGDVKDEL