AT3G48250

Gene Details

Gene ID: AT3G48250
Gene Symbol: BIR6
Gene Name: Buthionine sulfoximine-insensitive roots 6
Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
TAIR Accession: locus:2101190
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

GO:0003674 — enables — molecular_function
GO:0008380 — acts upstream of or within — RNA splicing
GO:0005739 — located in — mitochondrion

bir6-1 — Mutation of BIR6 affects splicing of intron 1 of mitochondrial nad7 transcript, leading to strongly reduced accumulation of fully processed nad7 transcript. This affects assembly of Complex I and results in moderate growth retardation.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT3G48250.1
GGAAAATTGCATTTTTGCTTAAACCCTATTATTGTCACTTTCTCTTCCTCTCCCTCTTCCTTATTCGAAAACACACAAAATCACAGTAGTAGCATCTGTAGCCATGTACAGATCAATGGCAATCCTGTCTTCTCTTCGACACGCGTACTCACAGATCTCTACTCGATCGTATCTAAGCCGATCTAAGGTGGGTTTTTCCTCAAACTTGTCTTCGCCTCTCGATTCATTTGCAATCGTCCCTAGTCGATTTCTTTGGAAATTTCGAACCTTTTCTTCGAAACCAGATTCTATGCTTCAATTAGTGCTTGAGAATGATTGGTCTAAGGAAGTAGAGGAAGGATTGAGGAAACCTGATATGTCTTTGACACACGAGACTGCAATTTACGTTCTGAGGAAATTGGAGAAGTATCCTGAAAAAGCTTATTACTTTCTCGATTGGGTTTTGAGAGATTCAGGGCTTAGTCCAAGTACTCCACTCTATAGCATTATGTTGAGGATTTTAGTGCAGCAGAGATCAATGAAACGGTTTTGGATGACTCTGAGGGAGATGAAACAAGGAGGGTTTTATTTAGACGAGGATACTTATAAGACTATTTATGGTGAGCTTAGTAAGGAGAAATCGAAAGCTGATGCTGTGGCTGTGGCTCATTTTTATGAGAGAATGCTTAAGGAGAACGCAATGTCTGTTGTTGCTGGAGAGGTTTCTGCTGTTGTTACTAAGGGGGATTGGAGTTGTGAGGTTGAGAGGGAATTGCAGGAGATGAAGCTCGTTTTGTCGGATAATTTTGTGATTAGGGTGTTGAAAGAACTAAGGGAACATCCTTTGAAAGCTTTGGCGTTTTTCCATTGGGTTGGTGGTGGTGGTAGTTCTTCTGGTTATCAACACAGTACTGTTACTTATAACGCAGCTTTGAGGGTTTTGGCTAGGCCTAACTCGGTTGCAGAGTTTTGGAGTGTTGTTGATGAAATGAAGACTGCAGGGTATGATATGGATCTTGACACTTATATAAAGGTTTCAAGGCAGTTTCAGAAATCTAGAATGATGGCTGAGACAGTTAAGCTTTATGAATATATGATGGATGGTCCGTTCAAACCATCTATTCAAGATTGTAGTCTTTTGTTGAGGTATTTATCGGGTAGTCCCAATCCAGATTTGGATTTGGTGTTTCGGGTTTCGAGGAAATATGAATCAACAGGGAAGTCTCTCTCAAAAGCTGTTTATGATGGAATCCACAGGTCTTTAACCAGTGTAGGTAGGTTTGACGAAGCTGAGGAAATCACCAAGGCTATGAGAAATGCGGGTTATGAGCCGGATAACATCACATACAGCCAACTCGTGTTTGGTCTTTGTAAAGCTAAGAGATTAGAAGAAGCACGAGGAGTCCTTGATCAAATGGAAGCACAAGGATGCTTTCCCGACATAAAAACTTGGACTATACTGATCCAAGGGCACTGCAAAAACAATGAATTGGATAAGGCCTTGGCGTGTTTTGCGAATATGCTAGAGAAAGGGTTTGATATTGACTCTAATCTGCTTGATGTCTTGATAGATGGGTTTGTTATCCACAACAAATTCGAGGGGGCAAGCATATTCCTTATGGAGATGGTGAAAAATGCCAATGTAAAGCCTTGGCAAAGCACGTACAAACTTCTTATAGACAAGCTGCTAAAGATCAAGAAGAGTGAAGAAGCACTAGATCTTCTTCAGATGATGAAGAAGCAAAATTACCCTGCGTATGCAGAAGCTTTTGATGGATACCTTGCAAAGTTTGGGACTTTGGAAGACGCTAAGAAGTTCTTGGATGTGCTTAGCTCAAAGGATTCTCCTTCCTTTGCAGCCTACTTTCATGTCATTGAAGCTTTCTATCGAGAAGGAAGACTCACTGATGCGAAAAATCTTCTCTTCATATGTCCCCATCACTTTAAAACTCACCCTAAAATCTCCGAACTCTTTGGTGCTGCAGCTTGAGGTATTATGTCACCCAATTGTTCCGCAGAGACATGTTCATCCCATTCAGCTACAAGAATACAACCAAGAGGTCATCTACTGTTTGGAAGTCTTTCCATTCAACCTCTCTGGAATAAAACTCTACTCTCTTTGCGAATAATGTCCATTCCTCTGTTCTACGTGCTGCAGGGTAGTAAGATGATTTTGTAGGCTTTGTTGATGGAACTGAAAGATGTTGTAGGATTGTTCATAAACAGTTTGCATTTATTTATTCATTTTGCAATTGTTGAGCTTCTCTGTCTCTTTCTTGTTTTCTTCAACTCAGTATTGAATGGATATCATTATTTTCATCAGAGAATGCAATTATGGATTGAGGTCTTGATCATGTCCTGGTAGAATCTTTCTCTTTGCTTTCATCTTTATTGAGGATCATTGTTGGAAGTATTAGACGACATGAAAAGTCAGAAAACTCTTATCCGAATATTAACCTCCAGACCTGTCTGCTTTGGCCATGTGAGGTTTGTTCCAGAAGTCTGTTAAGCTTACGTGTTCCTTCTTCACACATGCGGC

CDS Sequence

>AT3G48250.1
ATGTACAGATCAATGGCAATCCTGTCTTCTCTTCGACACGCGTACTCACAGATCTCTACTCGATCGTATCTAAGCCGATCTAAGGTGGGTTTTTCCTCAAACTTGTCTTCGCCTCTCGATTCATTTGCAATCGTCCCTAGTCGATTTCTTTGGAAATTTCGAACCTTTTCTTCGAAACCAGATTCTATGCTTCAATTAGTGCTTGAGAATGATTGGTCTAAGGAAGTAGAGGAAGGATTGAGGAAACCTGATATGTCTTTGACACACGAGACTGCAATTTACGTTCTGAGGAAATTGGAGAAGTATCCTGAAAAAGCTTATTACTTTCTCGATTGGGTTTTGAGAGATTCAGGGCTTAGTCCAAGTACTCCACTCTATAGCATTATGTTGAGGATTTTAGTGCAGCAGAGATCAATGAAACGGTTTTGGATGACTCTGAGGGAGATGAAACAAGGAGGGTTTTATTTAGACGAGGATACTTATAAGACTATTTATGGTGAGCTTAGTAAGGAGAAATCGAAAGCTGATGCTGTGGCTGTGGCTCATTTTTATGAGAGAATGCTTAAGGAGAACGCAATGTCTGTTGTTGCTGGAGAGGTTTCTGCTGTTGTTACTAAGGGGGATTGGAGTTGTGAGGTTGAGAGGGAATTGCAGGAGATGAAGCTCGTTTTGTCGGATAATTTTGTGATTAGGGTGTTGAAAGAACTAAGGGAACATCCTTTGAAAGCTTTGGCGTTTTTCCATTGGGTTGGTGGTGGTGGTAGTTCTTCTGGTTATCAACACAGTACTGTTACTTATAACGCAGCTTTGAGGGTTTTGGCTAGGCCTAACTCGGTTGCAGAGTTTTGGAGTGTTGTTGATGAAATGAAGACTGCAGGGTATGATATGGATCTTGACACTTATATAAAGGTTTCAAGGCAGTTTCAGAAATCTAGAATGATGGCTGAGACAGTTAAGCTTTATGAATATATGATGGATGGTCCGTTCAAACCATCTATTCAAGATTGTAGTCTTTTGTTGAGGTATTTATCGGGTAGTCCCAATCCAGATTTGGATTTGGTGTTTCGGGTTTCGAGGAAATATGAATCAACAGGGAAGTCTCTCTCAAAAGCTGTTTATGATGGAATCCACAGGTCTTTAACCAGTGTAGGTAGGTTTGACGAAGCTGAGGAAATCACCAAGGCTATGAGAAATGCGGGTTATGAGCCGGATAACATCACATACAGCCAACTCGTGTTTGGTCTTTGTAAAGCTAAGAGATTAGAAGAAGCACGAGGAGTCCTTGATCAAATGGAAGCACAAGGATGCTTTCCCGACATAAAAACTTGGACTATACTGATCCAAGGGCACTGCAAAAACAATGAATTGGATAAGGCCTTGGCGTGTTTTGCGAATATGCTAGAGAAAGGGTTTGATATTGACTCTAATCTGCTTGATGTCTTGATAGATGGGTTTGTTATCCACAACAAATTCGAGGGGGCAAGCATATTCCTTATGGAGATGGTGAAAAATGCCAATGTAAAGCCTTGGCAAAGCACGTACAAACTTCTTATAGACAAGCTGCTAAAGATCAAGAAGAGTGAAGAAGCACTAGATCTTCTTCAGATGATGAAGAAGCAAAATTACCCTGCGTATGCAGAAGCTTTTGATGGATACCTTGCAAAGTTTGGGACTTTGGAAGACGCTAAGAAGTTCTTGGATGTGCTTAGCTCAAAGGATTCTCCTTCCTTTGCAGCCTACTTTCATGTCATTGAAGCTTTCTATCGAGAAGGAAGACTCACTGATGCGAAAAATCTTCTCTTCATATGTCCCCATCACTTTAAAACTCACCCTAAAATCTCCGAACTCTTTGGTGCTGCAGCTTGA

Protein Sequence

>AT3G48250.1
MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLSSPLDSFAIVPSRFLWKFRTFSSKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAAA