Information report for AT3G48170
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005777 — located in — peroxisome
- GO:0005829 — located in — cytosol
- GO:0005737 — located in — cytoplasm
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0019285 — involved in — glycine betaine biosynthetic process from choline
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0110095 — involved in — cellular detoxification of aldehyde
- GO:0047105 — enables — 4-trimethylammoniobutyraldehyde dehydrogenase activity
- GO:0019145 — enables — aminobutyraldehyde dehydrogenase activity
- GO:0047107 — enables — gamma-guanidinobutyraldehyde dehydrogenase activity
- GO:0008802 — enables — betaine-aldehyde dehydrogenase activity
- GO:0004029 — enables — aldehyde dehydrogenase (NAD+) activity
Functional Keywords
Literature and News
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. DOI: 10.1104/pp.104.043695 ; PMID: 15333753
- The ALDH gene superfamily of Arabidopsis. DOI: 10.1016/j.tplants.2004.06.004 ; PMID: 15358267
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Betaine aldehyde dehydrogenase genes from Arabidopsis with different sub-cellular localization affect stress responses. DOI: 10.1007/s00425-010-1297-4 ; PMID: 21053011
- Proteome analysis of peroxisomes from etiolated Arabidopsis seedlings identifies a peroxisomal protease involved in β-oxidation and development. DOI: 10.1104/pp.113.223453 ; PMID: 24130194
- Overexpression of ALDH10A8 and ALDH10A9 Genes Provides Insight into Their Role in Glycine Betaine Synthesis and Affects Primary Metabolism in Arabidopsis thaliana. DOI: 10.1093/pcp/pcv105 ; PMID: 26169197
- Arabidopsis aldehyde dehydrogenase 10 family members confer salt tolerance through putrescine-derived 4-aminobutyrate (GABA) production. DOI: 10.1038/srep35115 ; PMID: 27725774
- Roles for ALDH10 enzymes in γ-butyrobetaine synthesis, seed development, germination, and salt tolerance in Arabidopsis. DOI: 10.1093/jxb/eraa394 ; PMID: 32845293
- The ALDH gene superfamily of Arabidopsis. DOI: 10.1016/j.tplants.2004.06.004 ; PMID: 15358267
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VGM7
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VGM7
- EnsemblPlants: AT3G48170.1
- Gramene: AT3G48170.1
- KEGG: ath:AT3G48170
- Orthologous matrix: WTRMLVH
- ExpressionAtlas: AT3G48170
- InterPro: IPR015590, IPR016160, IPR016161
- PANTHER: PTHR43860, PTHR43860:SF2
- SUPFAM: SSF53720
- PROSITE: PS00070, PS00687
- Gene3D: 3.40.309.10, 3.40.605.10
- OrthoDB: A0A178VGM7
- SWISS-MODEL: A0A178VGM7
- Conserved Domain Database: cd07110
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E23JR7
- Glycine max GmAMADH2
- Malus domestica MDP0000606021
- Oryza sativa BAD1;OsBADH1, OsBADH2;fgr, OsALDH2b;OsALDH2B1, ALDH2a;OsALDH2B5, OsALDH22, OsGAPDH, OsALDH7;OsALDH7B6, MMSDH, OS-ALDH
Sequences
cDNA Sequence
- >AT3G48170.1
CTATCAGAAAAATGGGTCAGATATCATTCTTAGAACCAAAACGGAAAGTCCCAACGATCCCATTTTACTCCTTTTCACCACCTCTAGTAGCAGAGAGAGAGAGAGAGTATGGCGATTACGGTGCCGAGACGGCAACTCTTCATCGGCGGTCAATGGACTGAGCCCGTTCTCCGTAAAACTCTCCCTGTTGTCAATCCCGCCACCGAAGACATCATCGGTTATATTCCAGCTGCAACTTCTGAAGATGTGGAGCTTGCTGTGGAAGCTGCTAGGAAAGCATTTACTAGGAACAACGGAAAGGATTGGGCTAGAGCAACTGGTGCTGTTCGTGCCAAATACTTGCGCGCTATTGCAGCTAAGGTAATAGAGAGGAAGTCTGAACTAGCTAATCTTGAGGCTATTGATTGCGGTAAACCTCTAGATGAAGCAGCATGGGACATGGATGATGTTGCTGGATGTTTTGAATATTATGCTGACCTAGCTGAAGGCTTGGATGCAAAGCAGAAGACTCCTCTTTCTCTTCCGATGGATACTTTTAAGGGTTATATTCTCAAGGAACCCATTGGCGTAGTTGGCATGATTACTCCATGGAACTATCCGTTATTGATGGCTGTCTGGAAAGTCGCTCCTTCACTTGCTGCTGGGTGCACGGCTATACTGAAACCTTCAGAGTTGGCCTCCCTGACATGTTTGGAGCTCGCTGATATTTGCCGCGAGGTGGGTCTACCACCTGGTGTTCTTAATATTCTGACTGGTTTAGGAACTGAAGCAGGTGCTCCACTGGCATCGCATCCACATGTTGACAAGATTGTATTCACTGGAAGCACAACAACTGGAAGCAGCATTATGACTTCCGCTGCCAAATTGGTGAAACCAGTTTCCTTGGAGCTTGGGGGTAAAAGCCCTATCATTGTCTTTGATGATGTCGATATTGATAAAGCTGTGGAATGGACTATGTTTGGTTGTTTCTGGACGAATGGGCAGATTTGTAGTGCCACATCTCGACTTCTTGTGCATGAAAGGATTGCTGACGAGTTTTTGGACAAGCTGGTAAAGTGGACCAAGAACATTAAGATTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTTGTCAGTAAAGGACAGTACGAGAGAGTTCTAAAGTTTGTCTCAAACGCTAGGAATGAAGGTGCAACTGTTCTTTGTGGAGGAGTTCGTCCTGAGCATTTAAAGAAGGGATACTTTGTTGAACCTGCGATTGTTTCAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTTGGTCCTGCTCTGTGTGTGAAAACATTCTCCACCGAGGATGAGGCAATTCAGCTTGCAAATGACTCTCAATATGGATTAGCAGGCGCAGTATTATCAAATGATCTGGAGCGGTGTGATCGTGTTAGTAAGGCTTTCCAGGCGGGAATAGTGTGGGTCAACTGCTCTCAGCCATGCTTCTGCCAAGCTCCATGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAATTGGGAGAATGGGGACTTGAGAACTACTTGAGTGTGAAGCAGGTGACTCAGTATATCTCTGATGAACCATGGGGATGGTACAAACCTCCTTCCAAGCTCTGAGACAAACACTAGTTCCTGATATTTCCTTAAAACATGTACTCATGAGAATATACCAATAAAGCAAGAGACCCTTCTGTAAGAGAAATGGTATTGCTACTTTAAATTCTTGAAAAAAATGAAAAATAAGATGAGATGATATTTCTTTTTGTTTTTCTCAAAACAACATGCCATACAAAAGTAGCAAAAAACTGGCGAAAGATGAATGCTCTTATATGTAACATACAAAAGTTACAGCCTACAGTAAACTTCAGAAAGCAAAGAGGGTATGCGATCTGTGAATTAATGTCGGATTCTTGCAGTTACAATTGTGTGGAGAAACTAAACCACATTGATCAAAAGAAATGACTCTTGAAGCTCTCTACACGAATGATGATTGATGTTCACAGGTAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAA
CDS Sequence
- >AT3G48170.1
ATGGCGATTACGGTGCCGAGACGGCAACTCTTCATCGGCGGTCAATGGACTGAGCCCGTTCTCCGTAAAACTCTCCCTGTTGTCAATCCCGCCACCGAAGACATCATCGGTTATATTCCAGCTGCAACTTCTGAAGATGTGGAGCTTGCTGTGGAAGCTGCTAGGAAAGCATTTACTAGGAACAACGGAAAGGATTGGGCTAGAGCAACTGGTGCTGTTCGTGCCAAATACTTGCGCGCTATTGCAGCTAAGGTAATAGAGAGGAAGTCTGAACTAGCTAATCTTGAGGCTATTGATTGCGGTAAACCTCTAGATGAAGCAGCATGGGACATGGATGATGTTGCTGGATGTTTTGAATATTATGCTGACCTAGCTGAAGGCTTGGATGCAAAGCAGAAGACTCCTCTTTCTCTTCCGATGGATACTTTTAAGGGTTATATTCTCAAGGAACCCATTGGCGTAGTTGGCATGATTACTCCATGGAACTATCCGTTATTGATGGCTGTCTGGAAAGTCGCTCCTTCACTTGCTGCTGGGTGCACGGCTATACTGAAACCTTCAGAGTTGGCCTCCCTGACATGTTTGGAGCTCGCTGATATTTGCCGCGAGGTGGGTCTACCACCTGGTGTTCTTAATATTCTGACTGGTTTAGGAACTGAAGCAGGTGCTCCACTGGCATCGCATCCACATGTTGACAAGATTGTATTCACTGGAAGCACAACAACTGGAAGCAGCATTATGACTTCCGCTGCCAAATTGGTGAAACCAGTTTCCTTGGAGCTTGGGGGTAAAAGCCCTATCATTGTCTTTGATGATGTCGATATTGATAAAGCTGTGGAATGGACTATGTTTGGTTGTTTCTGGACGAATGGGCAGATTTGTAGTGCCACATCTCGACTTCTTGTGCATGAAAGGATTGCTGACGAGTTTTTGGACAAGCTGGTAAAGTGGACCAAGAACATTAAGATTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTTGTCAGTAAAGGACAGTACGAGAGAGTTCTAAAGTTTGTCTCAAACGCTAGGAATGAAGGTGCAACTGTTCTTTGTGGAGGAGTTCGTCCTGAGCATTTAAAGAAGGGATACTTTGTTGAACCTGCGATTGTTTCAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTTGGTCCTGCTCTGTGTGTGAAAACATTCTCCACCGAGGATGAGGCAATTCAGCTTGCAAATGACTCTCAATATGGATTAGCAGGCGCAGTATTATCAAATGATCTGGAGCGGTGTGATCGTGTTAGTAAGGCTTTCCAGGCGGGAATAGTGTGGGTCAACTGCTCTCAGCCATGCTTCTGCCAAGCTCCATGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAATTGGGAGAATGGGGACTTGAGAACTACTTGAGTGTGAAGCAGGTGACTCAGTATATCTCTGATGAACCATGGGGATGGTACAAACCTCCTTCCAAGCTCTGA
Protein Sequence
- >AT3G48170.1
MAITVPRRQLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDWARATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEGLDAKQKTPLSLPMDTFKGYILKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLVKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKGYFVEPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL