Information report for AT3G48160
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0006340 — adult vascular leaf — hoja adulta (Spanish, exact), 維管束系の成葉 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
- GO:0005515 — enables — protein binding
- GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0032876 — acts upstream of or within — negative regulation of DNA endoreduplication
- GO:0042023 — acts upstream of or within — DNA endoreduplication
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0090575 — part of — RNA polymerase II transcription regulator complex
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0003677 — enables — DNA binding
- GO:0005634 — located in — nucleus
- del1-1 — Epidermal cells on abaxial surface have increased DNA content.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. DOI: 10.1074/jbc.M110616200 ; PMID: 11786543
- E2Ls, E2F-like repressors of Arabidopsis that bind to E2F sites in a monomeric form. DOI: 10.1074/jbc.M200913200 ; PMID: 11867638
- Genome-wide analysis of core cell cycle genes in Arabidopsis. DOI: 10.1105/tpc.010445 ; PMID: 11971144
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- A CDC45 homolog in Arabidopsis is essential for meiosis, as shown by RNA interference-induced gene silencing. DOI: 10.1105/tpc.016865 ; PMID: 14660803
- Identification and dynamics of two classes of aurora-like kinases in Arabidopsis and other plants. DOI: 10.1105/tpc.104.029710 ; PMID: 15722465
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The E2FD/DEL2 factor is a component of a regulatory network controlling cell proliferation and development in Arabidopsis. DOI: 10.1007/s11103-009-9577-8 ; PMID: 19937368
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Light-dependent regulation of DEL1 is determined by the antagonistic action of E2Fb and E2Fc. DOI: 10.1104/pp.111.183384 ; PMID: 21908689
- DELLA signaling mediates stress-induced cell differentiation in Arabidopsis leaves through modulation of anaphase-promoting complex/cyclosome activity. DOI: 10.1104/pp.112.195032 ; PMID: 22535421
- An insight into critical endocycle genes for plant-parasitic nematode feeding sites establishment. DOI: 10.4161/psb.24223 ; PMID: 23518580
- Tissue-Specific Control of the Endocycle by the Anaphase Promoting Complex/Cyclosome Inhibitors UVI4 and DEL1. DOI: 10.1104/pp.17.00785 ; PMID: 28698355
- Arabidopsis E2Fc is required for the DNA damage response under UV-B radiation epistatically over the microRNA396 and independently of E2Fe. DOI: 10.1111/tpj.14158 ; PMID: 30427087
- The DREAM complex represses growth in response to DNA damage in Arabidopsis. DOI: 10.26508/lsa.202101141 ; PMID: 34583930
- E2Fb and E2Fa transcription factors independently regulate the DNA damage response after ultraviolet B exposure in Arabidopsis. DOI: 10.1111/tpj.15616 ; PMID: 34859915
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
Gene Resources
Homologs
- Brassica napus GSBRNA2T00087787001, GSBRNA2T00057732001, GSBRNA2T00081161001, GSBRNA2T00063031001
- Brassica oleracea XP_013583773.1, XP_013604540.1
- Brassica rapa XP_009150874.1, XP_009150868.1, XP_009149841.1
- Raphanus raphanistrum RrC7587_p1, RrC14987_p2
Sequences
cDNA Sequence
- >AT3G48160.1
AATGTAATCTAATTTTGGAAAAGAAAAATGAAAAAGTTGAACAGAATCCTGAAAATATTGTAAGAAATTTTCTAAACCGAAAAAACAAAAAGACAAAAACCAAAAAATTGCGATCTGAACCGAGCACAAAACCGTAAAGGTTTCAGCTTTACCAAAATTTAGAGGAGTGTGTAAATGTTACGGAGAAGGAGGAGCCAAAAAATTCAAATTGGCGCTCAAGTATCTTGGGAAATTCCCCCTCTCTCTTTTTAGGAAATCCCTCCAAAATACAATATCAAATTCTCAATCGCAGACATCGTTTGCGTCAACCATGTCAGATCTATCGCCAGAAAGATTCAAACTTGCCGTTACTTCTCCTTCTTCCATACCGGAATCTTCTTCGGCTTTACAATTACACCATTCCTATAGTCGCAAACAGAAATCTCTCGGACTTCTTTGTACCAATTTCTTAGCTTTGTATAATCGAGAAGGGATTGAAATGGTTGGGCTTGATGATGCTGCCTCGAAATTAGGAGTGGAGAGACGAAGAATCTATGATATTGTTAATGTTCTGGAGAGTGTTGGGGTTTTAACAAGAAGAGCAAAGAATCAGTATACGTGGAAAGGGTTTTCCGCAATTCCAGGAGCATTGAAGGAGCTACAAGAAGAGGGGGTTAAGGACACTTTTCATCGTTTCTATGTCAATGAGAATGTTAAAGGATCTGATGATGAGGATGATGATGAAGAGTCTTCTCAGCCTCACTCTAGTAGCCAGACTGATAGTTCAAAACCTGGTTCTCTTCCCCAATCTTCAGATCCCTCCAAAATAGATAACCGACGAGAGAAATCTTTAGGATTGCTTACTCAGAACTTTATCAAACTCTTTATTTGCTCTGAAGCTATTAGGATCATCTCCCTTGATGACGCTGCAAAATTACTGCTTGGTGATGCCCACAATACATCAATAATGCGAACTAAAGTGAGGCGGCTTTATGATATAGCAAATGTCTTGTCGTCAATGAATCTCATAGAGAAGACTCACACCTTAGATTCTAGGAAACCAGCTTTCAAGTGGTTAGGGTACAATGGTGAGCCTACTTTCACACTGAGCAGCGATTTGTTGCAATTGGAGTCAAGAAAAAGAGCTTTCGGAACTGATATTACAAACGTCAATGTTAAGAGAAGCAAATCATCATCTTCGTCCCAAGAAAACGCTACAGAGAGAAGGCTAAAGATGAAAAAGCACTCAACACCAGAGAGTTCTTATAACAAAAGCTTTGATGTTCATGAATCAAGACATGGATCAAGAGGAGGTTACCATTTTGGACCTTTTGCACCAGGCACTGGTACATATCCAACTGCTGGTTTAGAGGATAACTCTAGGAGAGCTTTTGATGTTGAGAATCTGGATTCTGATTACCGTCCCTCTTACCAAAACCAAGGTGCATATATTTTATTCACATCCATTTGATATCAAACTTGTCAAAATATTGCTATGAAATTAA - >AT3G48160.2
AATGTAATCTAATTTTGGAAAAGAAAAATGAAAAAGTTGAACAGAATCCTGAAAATATTGTAAGAAATTTTCTAAACCGAAAAAACAAAAAGACAAAAACCAAAAAATTGCGATCTGAACCGAGCACAAAACCGTAAAGGTTTCAGCTTTACCAAAATTTAGAGGAGTGTGTAAATGTTACGGAGAAGGAGGAGCCAAAAAATTCAAATTGGCGCTCAAGTATCTTGGGAAATTCCCCCTCTCTCTTTTTAGGAAATCCCTCCAAAATACAATATCAAATTCTCAATCGCAGACATCGTTTGCGTCAACCATGTCAGATCTATCGCCAGAAAGATTCAAACTTGCCGTTACTTCTCCTTCTTCCATACCGGAATCTTCTTCGGCTTTACAATTACACCATTCCTATAGTCGCAAACAGAAATCTCTCGGACTTCTTTGTACCAATTTCTTAGCTTTGTATAATCGAGAAGGGATTGAAATGGTTGGGCTTGATGATGCTGCCTCGAAATTAGGAGTGGAGAGACGAAGAATCTATGATATTGTTAATGTTCTGGAGAGTGTTGGGGTTTTAACAAGAAGAGCAAAGAATCAGTATACGTGGAAAGGGTTTTCCGCAATTCCAGGAGCATTGAAGGAGCTACAAGAAGAGGGGGTTAAGGACACTTTTCATCGTTTCTATGTCAATGAGAATGTTAAAGGATCTGATGATGAGGATGATGATGAAGAGTCTTCTCAGCCTCACTCTAGTAGCCAGACTGATAGTTCAAAACCTGGTTCTCTTCCCCAATCTTCAGATCCCTCCAAAATAGATAACCGACGAGAGAAATCTTTAGGATTGCTTACTCAGAACTTTATCAAACTCTTTATTTGCTCTGAAGCTATTAGGATCATCTCCCTTGATGACGCTGCAAAATTACTGCTTGGTGATGCCCACAATACATCAATAATGCGAACTAAAGTGAGGCGGCTTTATGATATAGCAAATGTCTTGTCGTCAATGAATCTCATAGAGAAGACTCACACCTTAGATTCTAGGAAACCAGCTTTCAAGTGGTTAGGGTACAATGGTGAGCCTACTTTCACACTGAGCAGCGATTTGTTGCAATTGGAGTCAAGAAAAAGAGCTTTCGGAACTGATATTACAAACGTCAATGTTAAGAGAAGCAAATCATCATCTTCGTCCCAAGAAAACGCTACAGAGAGAAGGCTAAAGATGAAAAAGCACTCAACACCAGAGAGTTCTTATAACAAAAGCTTTGATGTTCATGAATCAAGACATGGATCAAGAGGAGGTTACCATTTTGGACCTTTTGCACCAGGCACTGGTACATATCCAACTGCTGGTTTAGAGGATAACTCTAGGAGAGCTTTTGATGTTGAGAATCTGGATTCTGATTACCGTCCCTCTTACCAAAACCAAGGTGCATATATTTTATTCACATCCATTTGATATCAAACTTGTCAAAATATTGCTATGAAATTAA
CDS Sequence
- >AT3G48160.1
ATGTCAGATCTATCGCCAGAAAGATTCAAACTTGCCGTTACTTCTCCTTCTTCCATACCGGAATCTTCTTCGGCTTTACAATTACACCATTCCTATAGTCGCAAACAGAAATCTCTCGGACTTCTTTGTACCAATTTCTTAGCTTTGTATAATCGAGAAGGGATTGAAATGGTTGGGCTTGATGATGCTGCCTCGAAATTAGGAGTGGAGAGACGAAGAATCTATGATATTGTTAATGTTCTGGAGAGTGTTGGGGTTTTAACAAGAAGAGCAAAGAATCAGTATACGTGGAAAGGGTTTTCCGCAATTCCAGGAGCATTGAAGGAGCTACAAGAAGAGGGGGTTAAGGACACTTTTCATCGTTTCTATGTCAATGAGAATGTTAAAGGATCTGATGATGAGGATGATGATGAAGAGTCTTCTCAGCCTCACTCTAGTAGCCAGACTGATAGTTCAAAACCTGGTTCTCTTCCCCAATCTTCAGATCCCTCCAAAATAGATAACCGACGAGAGAAATCTTTAGGATTGCTTACTCAGAACTTTATCAAACTCTTTATTTGCTCTGAAGCTATTAGGATCATCTCCCTTGATGACGCTGCAAAATTACTGCTTGGTGATGCCCACAATACATCAATAATGCGAACTAAAGTGAGGCGGCTTTATGATATAGCAAATGTCTTGTCGTCAATGAATCTCATAGAGAAGACTCACACCTTAGATTCTAGGAAACCAGCTTTCAAGTGGTTAGGGTACAATGGTGAGCCTACTTTCACACTGAGCAGCGATTTGTTGCAATTGGAGTCAAGAAAAAGAGCTTTCGGAACTGATATTACAAACGTCAATGTTAAGAGAAGCAAATCATCATCTTCGTCCCAAGAAAACGCTACAGAGAGAAGGCTAAAGATGAAAAAGCACTCAACACCAGAGAGTTCTTATAACAAAAGCTTTGATGTTCATGAATCAAGACATGGATCAAGAGGAGGTTACCATTTTGGACCTTTTGCACCAGGCACTGGTACATATCCAACTGCTGGTTTAGAGGATAACTCTAGGAGAGCTTTTGATGTTGAGAATCTGGATTCTGATTACCGTCCCTCTTACCAAAACCAAGGTGCATATATTTTATTCACATCCATTTGA - >AT3G48160.2
ATGTCAGATCTATCGCCAGAAAGATTCAAACTTGCCGTTACTTCTCCTTCTTCCATACCGGAATCTTCTTCGGCTTTACAATTACACCATTCCTATAGTCGCAAACAGAAATCTCTCGGACTTCTTTGTACCAATTTCTTAGCTTTGTATAATCGAGAAGGGATTGAAATGGTTGGGCTTGATGATGCTGCCTCGAAATTAGGAGTGGAGAGACGAAGAATCTATGATATTGTTAATGTTCTGGAGAGTGTTGGGGTTTTAACAAGAAGAGCAAAGAATCAGTATACGTGGAAAGGGTTTTCCGCAATTCCAGGAGCATTGAAGGAGCTACAAGAAGAGGGGGTTAAGGACACTTTTCATCGTTTCTATGTCAATGAGAATGTTAAAGGATCTGATGATGAGGATGATGATGAAGAGTCTTCTCAGCCTCACTCTAGTAGCCAGACTGATAGTTCAAAACCTGGTTCTCTTCCCCAATCTTCAGATCCCTCCAAAATAGATAACCGACGAGAGAAATCTTTAGGATTGCTTACTCAGAACTTTATCAAACTCTTTATTTGCTCTGAAGCTATTAGGATCATCTCCCTTGATGACGCTGCAAAATTACTGCTTGGTGATGCCCACAATACATCAATAATGCGAACTAAAGTGAGGCGGCTTTATGATATAGCAAATGTCTTGTCGTCAATGAATCTCATAGAGAAGACTCACACCTTAGATTCTAGGAAACCAGCTTTCAAGTGGTTAGGGTACAATGGTGAGCCTACTTTCACACTGAGCAGCGATTTGTTGCAATTGGAGTCAAGAAAAAGAGCTTTCGGAACTGATATTACAAACGTCAATGTTAAGAGAAGCAAATCATCATCTTCGTCCCAAGAAAACGCTACAGAGAGAAGGCTAAAGATGAAAAAGCACTCAACACCAGAGAGTTCTTATAACAAAAGCTTTGATGTTCATGAATCAAGACATGGATCAAGAGGAGGTTACCATTTTGGACCTTTTGCACCAGGCACTGGTACATATCCAACTGCTGGTTTAGAGGATAACTCTAGGAGAGCTTTTGATGTTGAGAATCTGGATTCTGATTACCGTCCCTCTTACCAAAACCAAGGTGCATATATTTTATTCACATCCATTTGA
Protein Sequence
- >AT3G48160.1
MSDLSPERFKLAVTSPSSIPESSSALQLHHSYSRKQKSLGLLCTNFLALYNREGIEMVGLDDAASKLGVERRRIYDIVNVLESVGVLTRRAKNQYTWKGFSAIPGALKELQEEGVKDTFHRFYVNENVKGSDDEDDDEESSQPHSSSQTDSSKPGSLPQSSDPSKIDNRREKSLGLLTQNFIKLFICSEAIRIISLDDAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTLDSRKPAFKWLGYNGEPTFTLSSDLLQLESRKRAFGTDITNVNVKRSKSSSSSQENATERRLKMKKHSTPESSYNKSFDVHESRHGSRGGYHFGPFAPGTGTYPTAGLEDNSRRAFDVENLDSDYRPSYQNQGAYILFTSI - >AT3G48160.2
MSDLSPERFKLAVTSPSSIPESSSALQLHHSYSRKQKSLGLLCTNFLALYNREGIEMVGLDDAASKLGVERRRIYDIVNVLESVGVLTRRAKNQYTWKGFSAIPGALKELQEEGVKDTFHRFYVNENVKGSDDEDDDEESSQPHSSSQTDSSKPGSLPQSSDPSKIDNRREKSLGLLTQNFIKLFICSEAIRIISLDDAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTLDSRKPAFKWLGYNGEPTFTLSSDLLQLESRKRAFGTDITNVNVKRSKSSSSSQENATERRLKMKKHSTPESSYNKSFDVHESRHGSRGGYHFGPFAPGTGTYPTAGLEDNSRRAFDVENLDSDYRPSYQNQGAYILFTSI