AT3G48100

Gene Details

Gene ID: AT3G48100
Gene Symbol: ARR5, ATRR2, IBC6, RR5
Gene Name: response regulator 5, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, INDUCED BY CYTOKININ 6, response regulator 5
Description: response regulator 5;(source:Araport11)
TAIR Accession: locus:2097870
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000146 — abscission zone — zona de absición (Spanish, exact), 離層 (Japanese, exact), abscission layer (related)
PO:0006085 — root meristem — meristema de la raíz (Spanish, exact), 根分裂組織 (Japanese, exact), meristematic zone (related)
PO:0020144 — apical meristem — AM (exact), meristema apical (Spanish, exact), 頂端分裂組織 (Japanese, exact), primary meristem (related), promeristem (broad)
PO:0003011 — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)
PO:0020148 — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000026 — primary root tip — punta de la raíz primaria (Spanish, exact), 一次根端 (Japanese, exact)
PO:0003021 — central root cap of primary root — caliptra de la raíz central de la raíz primaria (Spanish, exact), 一次根の中心根冠 (Japanese, exact)
PO:0003022 — lateral root cap of primary root — caliptra de la raíz lateral de la raíz primaria (Spanish, exact), 一次根の側根冠 (Japanese, exact)
PO:0006307 — root procambium — procambium de la raíz (Spanish, exact), 根前形成層 (Japanese, exact)

GO:0005515 — enables — protein binding
GO:0009736 — acts upstream of or within — cytokinin-activated signaling pathway
GO:0005737 — located in — cytoplasm
GO:0009735 — acts upstream of or within — response to cytokinin
GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
GO:0010114 — acts upstream of or within — response to red light
GO:0000156 — enables — phosphorelay response regulator activity
GO:0007623 — acts upstream of or within — circadian rhythm
GO:0005634 — located in — nucleus

CS25267 — Reduced rosette size when grown under short-day conditions; cytokinin sensitivity similar to wild type in seedling root elongation and seedling lateral root formation; increased sensitivity to red light.
CS25272 — No adult visible phenotype; the reduced rosette size of arr5 is not enhanced but suppressed by the arr6 mutation (suggesting antagonistic function); subtle difference in cytokinin sensitivity of root elongation compared to the wild type; intermediate cytokinin sensitivity between the wild type and arr3,4,5,6, arr5,6,8,9 and arr3,4,8,9 quadruple mutants in seedling lateral root formation; somewhat increased sensitivity to red light.
CS25273 — Adult phenotype similar to the arr5 parent: reduced rosette size when grown under short-day conditions; increased cytokinin inhibition of root elongation but intermediate between arr3,4,5,6 and the wild type; intermediate cytokinin sensitivity between the wild type and arr3,4,5,6, arr5,6,8,9 and arr3,4,8,9 quadruple mutants in seedling lateral root formation; increased sensitivity to red light.
CS25276 — The elongated petioles of arr4 and arr3,4 are enhanced, but the overall rosette size is similar to that of the wild-type parent; the increased petiole elongation suggests that although ARR5 and ARR6 may act antagonistically to each other in regulating rosette size, as a pair they still function additively with ARR3 and ARR4 in the regulation of petiole elongation; root elongation responses intermediate between arr3,4,5,6,8,9 and the wild type, but significantly more sensitive than arr3,4; intermediate cytokinin sensitivity in seedling lateral root formation, between the wild type and the arr3,4,5,6,8,9 hextuple mutant, with the sensitivity of arr3,4,8,9 closest to arr3,4,5,6,8,9; increased sensitivity to red light.
CS25277 — No adult visible phenotype; root elongation responses intermediate between arr3,4,5,6,8,9 and the wild type; but significantly more sensitive than arr8,9; intermediate cytokinin sensitivity in seedling lateral root formation, between the wild type and the arr3,4,5,6,8,9 hextuple mutant, with the sensitivity of arr3,4,8,9 closest to arr3,4,5,6,8,9; intermediate cytokinin sensitivity in seedling lateral root formation, between the wild type and the arr3,4,5,6,8,9 hextuple mutant, with the sensitivity of arr3,4,8,9 closest to arr3,4,5,6,8,9.
CS25279 — Intermediate petiole length between arr3,4,5,6 and the wild type (suggesting complex interactions between these genes); roots are shorter and have significantly fewer lateral roots than the wild type in the absence of exogenous cytokinin; increased cytokinin hypersensitivity in seedling root elongation, seedling lateral root formation, hypocotyls/ shoot initiation and leaf senescence delay; decreased sensitivity to red light compared to wild type.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT3G48100.1
AATTAGCCACGCGCTATCAGACAGACAAAATCCCACAGATATGCAAAGATCTCTCAGAATCCTCTCCCCATATCATATTTTTCTCTTTTCCCTCTCCTTCTTTCTTCCTTTATAAATCCATTTATTCTCCTCTCATCTCTCAGCAAAATCAAATCCTCATAGTTGATTCTCTCTATCTCTCTCACGAGTCACGATCCTACTCTTCTTGATATGGCTGAGGTTTTGCGTCCCGAGATGTTAGATATCTCTAACGACACTTCTTCATTAGCATCACCGAAACTTCTTCATGTTCTTGCTGTTGATGATAGTATGGTTGATCGGAAGTTCATCGAGCGGTTACTCAGAGTCTCATCTTGTAAAGTTACTGTTGTCGATAGTGCGACAAGAGCTTTACAATATCTTGGATTAGATGGAGAGAATAATAGTTCGGTTGGATTTGAGGATCTGAAGATTAATTTGATAATGACGGATTACTCTATGCCTGGGATGACTGGATATGAACTACTGAAGAAGATCAAAGAATCATCAGCTTTCAGAGAAATACCAGTTGTGATTATGTCTTCAGAGAACATCTTGCCTCGTATCGATAGATGTCTTGAAGAAGGAGCTGAAGATTTCTTATTGAAGCCTGTGAAATTAGCTGATGTGAAGAGATTAAGAGATTCTTTAATGAAAGCTGAGGAAAGAGCTTTTAAGAATATTATGCACAAGAGAGAGCTTGAAGCTAATGATATCTACTCGCAGCTAAAACGCGCAAAGATCTGAGTTTATCAGATTCCACGTACGATATGTTCTTTAAAAGCTCAAAGATTCACACACATGCATGTCCTGATTCTTTCGGCTTACAATTTTTGAGACATTACGGCTTCTTTTGCTGATAGAACCAAGACTGATCAAGAGTGACAAAGATGGGTTTTTATAAGATAGAAATGTAAATTGTAGACTTGGATTCATTAGAGAGGAGAAGAGATACATTTTTTTTTTCTTTACATGAGAGATATGTAAAATGGTGGTGTGTTATTTTGGAAGTTAACATATGAATTTCTTTTGTTAAGATTACTTAAATAATGATTTAGGAATGGATTAGTAGTTTAGTACCGTTCATTACACGAAGACAAGCTAATCTTTTGTCTAATTAAAATAAAGCTGTCTACATGAATCGAATCCAGCGAGATAAGTTAGTTATTTTAAGCGTTGGTTGGAACACTTTACATGGCTTTTCGTAGAAATTTCCCCAAGTTGGGTTTTATTAAGACCAAGAAAATTCTAGTCTCCTAGACTTTTTTTTGTTTCTTTTGTTAATTTAGTCTCCTAGGCTTTTTCATTCTATCTGAAAGCAAAATATGGTTATGCAATTTGGTTTAGCCAAAAAAACAAACTAAATTTTTCTAGTCCGGTTCATGTAACTTCATAATCAAACAAGTAAAAGTCGAATGTGACGCGTCTTGCC

CDS Sequence

>AT3G48100.1
ATGGCTGAGGTTTTGCGTCCCGAGATGTTAGATATCTCTAACGACACTTCTTCATTAGCATCACCGAAACTTCTTCATGTTCTTGCTGTTGATGATAGTATGGTTGATCGGAAGTTCATCGAGCGGTTACTCAGAGTCTCATCTTGTAAAGTTACTGTTGTCGATAGTGCGACAAGAGCTTTACAATATCTTGGATTAGATGGAGAGAATAATAGTTCGGTTGGATTTGAGGATCTGAAGATTAATTTGATAATGACGGATTACTCTATGCCTGGGATGACTGGATATGAACTACTGAAGAAGATCAAAGAATCATCAGCTTTCAGAGAAATACCAGTTGTGATTATGTCTTCAGAGAACATCTTGCCTCGTATCGATAGATGTCTTGAAGAAGGAGCTGAAGATTTCTTATTGAAGCCTGTGAAATTAGCTGATGTGAAGAGATTAAGAGATTCTTTAATGAAAGCTGAGGAAAGAGCTTTTAAGAATATTATGCACAAGAGAGAGCTTGAAGCTAATGATATCTACTCGCAGCTAAAACGCGCAAAGATCTGA

Protein Sequence

>AT3G48100.1
MAEVLRPEMLDISNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMKAEERAFKNIMHKRELEANDIYSQLKRAKI