Gene Details:
- Gene ID: AT3G47730
- Gene Symbol: ABCA2, ATATH1, ATH1
- Gene Name: ATP-binding cassette A2, A. THALIANA ABC2 HOMOLOG 1, ABC2 homolog 1
- Description: ATP-binding cassette A2;(source:Araport11)
- TAIR Accession: locus:2100367
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0022857 — enables — transmembrane transporter activity
- GO:0042626 — enables — ATPase-coupled transmembrane transporter activity
- GO:0005319 — enables — lipid transporter activity
- GO:0055085 — involved in — transmembrane transport
- GO:0140359 — enables — ABC-type transporter activity
- GO:0043231 — is active in — intracellular membrane-bounded organelle
- GO:0006869 — involved in — lipid transport
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Competence to respond to floral inductive signals requires the homeobox genes PENNYWISE and POUND-FOOLISH. DOI: 10.1016/j.cub.2004.04.032 ; PMID: 15120075
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- MAIGO2 is involved in exit of seed storage proteins from the endoplasmic reticulum in Arabidopsis thaliana. DOI: 10.1105/tpc.106.046151 ; PMID: 17194767
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. DOI: 10.1104/pp.107.109587 ; PMID: 18065561
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The role of ABC transporters in kin recognition in Arabidopsis thaliana. DOI: 10.4161/psb.6.8.15907 ; PMID: 21758011
- Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. DOI: 10.1104/pp.15.00915 ; PMID: 26417006
- Arabidopsis thaliana rosette habit is controlled by combined light and energy signaling converging on transcriptional control of the TALE homeobox gene ATH1. DOI: 10.1111/nph.19014 ; PMID: 37291904
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
Sequences:
cDNA Sequence
- >AT3G47730.1
TCCTGGTACAGAAGTAAATACATTTATTACTACACGGTTTTTGTCCAGAAGTTACGTTTTTCCAGGTAGTTTCGCAGGCAAAATACGAGAGGCAAATTCGTAATTACTCACAACTCCAGAGTCATAAATATAAAAAAAAAATCTTACGCCTCTCTTAAATCGTCCCCTCCAATCAAAATCAGATCACAGTAAGATTCCCAAAATTCGAAAAAAAAGCTTCCCAGAGAGAAGAGAAAAAACTTCTCTGAGGCGGCCATGACGTTGCAGAGAGGTTTACCTCTTCTCTTGCAACAGTACACGGCGTTGTTCAAGAAAAACCTTTTGCTTTCATGGCGGAGCAAACGAGCCACGTTTCTTCAGCTCTTCGCTTCTTTCTTCTTCATCCTTCTCATCTTCTGTATCCAAGCAGCCATGGAGAAGAGTTTCGCTTCCTCCACGGCTCTCAAAACTGTTACGGATCCGACGGCGCTGATATCGCCGCCGATTCCGCCTTGTGAAGATAAATTCTTCGTGAATCTTCCTTGCTATGACTTTGTTTGGAGCGGTAATCGTAGCTCCAAGGTCACGCAGATTGTTAATGCGATTATGAAGAATAATCCTGGAAGAAGTATTCCTATTGAGAAGGTACGATCATTCGTGGATCCTGAAGCGGTAGATACGTGGCTTATGGCGAATCCTTTGTTAGTTCCAGGAGCTTTGCACTTTATTGAAAGAAATGCTACAGTGATAAGTTATGGTATTCAAACTAACTCAACTCCAGAGATGAATAGAGGAAGGTTTGAAGATCCTACTTTTAAGTTTCAGATACCTCTTCAAATTGCGGCTGAGCGTGAAATCGCGAGGTCGTTGATAGGAGATCCGAACTTTAATTGGGTTGTTGGGTTTAAGGAGTTTCCTCACCCAACTATTGAAGCTATTGTTGCGTTGGACACTATAGGACCGACTTTTTTCCTTGCGGTTGCTATGTTTGGTTTTGTACTTCAGATTAGTTCTTTGATTACTGAGAAAGAGCTTAAACTTCGCCAGGCAATGACGATGATGGGTGTTTTTGACACTGCTTATTGGTTGTCATGGCTTACTTGGGAAGGAATTCTTACTGCCATCTCGGCGCTCCTGACGGTTCTGTTTGGAATGATGTTCCAGTTCGACTTTTTCTTGAAGAACAGTTTCCCTGTTGTCTTCCTACTTTTCATGCTTTTCCAGTTTAATTTGATTGGACTAGCATTCATGCTATCAGCTTTTATCAGTAAATCAACTTCAGCAACAACTGTCGGTTTCTTTGTGTTTCTGGTTGGCTTTGTAACACAGCTTGCAACATCAAGTGGGTTTCCCTATGCCAAGAAGTATTCTCGTATGATCAGGGCACTTTGGTCACTGTTCCCACCCAATACCTTTTCTCAGGGTTTAAAGTTGCTCGCTGATGCAACTTCAACTCCTCAAGATCCTGGTATTAGTTGGAGTAAAAGAGCAGAATGCGGTCCTAACGACGACACTGGTTGTGTGCTTACAATTAATGATATCTACTTGTGGCTTCTTGGGACTTTCTTTTTGTGGTTTGTTTTGGCTCTTTACTTTGACAATATAACTCCAAATGCTTCTGGAGTAAGAAAATCTATCTTCTACTTTCTAAAACCTGGGTACTGGACCGGCAAAGGTGGCAACCGAGTAGAAGAAGGTGGAATTTGTAGTTGTATTGGTTCAGTTCCACCTGTGGATCACATTACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTTAGTTAAACAACATTCAATGGAGGGTTTAGTTGATCCCAACGTTGCAGTTCAAATACGTGGTCTTGCAAAGACTTATCCTGGGACGACGAAGTTTGGATGCTGCAAATGCAAGAAAACTTCCCCTTTTCATGCTCTGAAGGGTTTGTGGATGAATATTGCCAAAGATCAATTATTCTGTCTTCTTGGACCCAATGGTGCAGGGAAAACAACTACTATCAATTGTTTGACAGGCTTATTTCCAGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGTCCAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCTGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCTTCATCAATCAACTCGATGGTTGAGAAGTCACTGGCGGAGGTAAAACTAACAGAAGCAGGGAAAATCAGGGCAGGAAGTTACAGTGGAGGAATGAAACGGCGACTCAGTGTTGCAGTTTCTCTCATTGGTGATCCAAAGCTGGTCTTCCTGGACGAACCTACTACAGGCATGGACCCGATCACGAGGAGACATGTGTGGGATATCATACAGGAAACCAAGAAAGGTCGTGCCATTATACTAACAACACATTCGATGGAAGAAGCTGATATCTTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTCCGCTGCATTGGAACCTCGATCAGGTTGAAATCCCGCTTTGGCACAGGTTTCATTGCTAACATTAGCTTTGTTGAAAGCAACAACCACAATGGCGAAGCTGGTTCGGATTCACGCGAGCCAGTGAAGAAATTCTTTAAAGATCATCTCAAAGTCAAACCAATAGAAGAAAACAAGGCCTTCATGACTTTTGTTATACCTCACGACAAAGAGAATCTTTTGACAAGCTTTTTCGCTGAGCTTCAAGACAGAGAAGAAGAATTTGGAATCTCAGATATCCAACTTGGTCTTGCTACTCTTGAAGAAGTCTTTTTGAACATAGCAAGAAAAGCTGAACTCGAAAGCGCTGCGGTTGATGGAACAATGGTCACTCTCGACTTAACATCTGGTTCTTCAGTCGAGATACCGGTAGGGGCAAGATTTATCGGGATACCGGGAACAGAAACTGCAGAGAATCCACGAGGAGTCATGGTGGAGGTGTATTGGCAACAAGACGAGTCAGGATCATTGTGCATCTCAGGACACTCCACAGAGATGCCAATTCCTGAAAACATTCCCGTGACAGATCCGGTGGCACCAGGACATGGCGGAGTAAACTTGTTGGGACGGAGAGGACGAAGACAAGTTCAGGGAATTGTGATTGATCCTGAGTTTGCTACTTTTACTAGAAGCGGTTCCACTTCTTCCCGACGTTTTTCTAGAAGCGGTTCTTCCCGACGTTTTTCATCGTGAATTGAAATATAATCCGCCCGCATACACATACACTCACAGTTCTTAACTTAACGGATTGCGCTCTACAGGTTTTTCTGGTTCGTTGTTGTAGTTTTATACGAGGAAAATCACAGGCGTGTTTATTTGAAATTGTGTTTTACGTAATTATGATGTAAATTAGACTGAAGTTTGTGATTAAAAAAACAAATATTAAACACTACTATCAGTGTGACACATCCAAATTCTAGTGTAATCAACATTGTAGCTAATAAACGACTACTCTTTATATCGATGCGTTTAGCC
CDS Sequence
- >AT3G47730.1
ATGACGTTGCAGAGAGGTTTACCTCTTCTCTTGCAACAGTACACGGCGTTGTTCAAGAAAAACCTTTTGCTTTCATGGCGGAGCAAACGAGCCACGTTTCTTCAGCTCTTCGCTTCTTTCTTCTTCATCCTTCTCATCTTCTGTATCCAAGCAGCCATGGAGAAGAGTTTCGCTTCCTCCACGGCTCTCAAAACTGTTACGGATCCGACGGCGCTGATATCGCCGCCGATTCCGCCTTGTGAAGATAAATTCTTCGTGAATCTTCCTTGCTATGACTTTGTTTGGAGCGGTAATCGTAGCTCCAAGGTCACGCAGATTGTTAATGCGATTATGAAGAATAATCCTGGAAGAAGTATTCCTATTGAGAAGGTACGATCATTCGTGGATCCTGAAGCGGTAGATACGTGGCTTATGGCGAATCCTTTGTTAGTTCCAGGAGCTTTGCACTTTATTGAAAGAAATGCTACAGTGATAAGTTATGGTATTCAAACTAACTCAACTCCAGAGATGAATAGAGGAAGGTTTGAAGATCCTACTTTTAAGTTTCAGATACCTCTTCAAATTGCGGCTGAGCGTGAAATCGCGAGGTCGTTGATAGGAGATCCGAACTTTAATTGGGTTGTTGGGTTTAAGGAGTTTCCTCACCCAACTATTGAAGCTATTGTTGCGTTGGACACTATAGGACCGACTTTTTTCCTTGCGGTTGCTATGTTTGGTTTTGTACTTCAGATTAGTTCTTTGATTACTGAGAAAGAGCTTAAACTTCGCCAGGCAATGACGATGATGGGTGTTTTTGACACTGCTTATTGGTTGTCATGGCTTACTTGGGAAGGAATTCTTACTGCCATCTCGGCGCTCCTGACGGTTCTGTTTGGAATGATGTTCCAGTTCGACTTTTTCTTGAAGAACAGTTTCCCTGTTGTCTTCCTACTTTTCATGCTTTTCCAGTTTAATTTGATTGGACTAGCATTCATGCTATCAGCTTTTATCAGTAAATCAACTTCAGCAACAACTGTCGGTTTCTTTGTGTTTCTGGTTGGCTTTGTAACACAGCTTGCAACATCAAGTGGGTTTCCCTATGCCAAGAAGTATTCTCGTATGATCAGGGCACTTTGGTCACTGTTCCCACCCAATACCTTTTCTCAGGGTTTAAAGTTGCTCGCTGATGCAACTTCAACTCCTCAAGATCCTGGTATTAGTTGGAGTAAAAGAGCAGAATGCGGTCCTAACGACGACACTGGTTGTGTGCTTACAATTAATGATATCTACTTGTGGCTTCTTGGGACTTTCTTTTTGTGGTTTGTTTTGGCTCTTTACTTTGACAATATAACTCCAAATGCTTCTGGAGTAAGAAAATCTATCTTCTACTTTCTAAAACCTGGGTACTGGACCGGCAAAGGTGGCAACCGAGTAGAAGAAGGTGGAATTTGTAGTTGTATTGGTTCAGTTCCACCTGTGGATCACATTACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTTAGTTAAACAACATTCAATGGAGGGTTTAGTTGATCCCAACGTTGCAGTTCAAATACGTGGTCTTGCAAAGACTTATCCTGGGACGACGAAGTTTGGATGCTGCAAATGCAAGAAAACTTCCCCTTTTCATGCTCTGAAGGGTTTGTGGATGAATATTGCCAAAGATCAATTATTCTGTCTTCTTGGACCCAATGGTGCAGGGAAAACAACTACTATCAATTGTTTGACAGGCTTATTTCCAGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGTCCAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCTGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCTTCATCAATCAACTCGATGGTTGAGAAGTCACTGGCGGAGGTAAAACTAACAGAAGCAGGGAAAATCAGGGCAGGAAGTTACAGTGGAGGAATGAAACGGCGACTCAGTGTTGCAGTTTCTCTCATTGGTGATCCAAAGCTGGTCTTCCTGGACGAACCTACTACAGGCATGGACCCGATCACGAGGAGACATGTGTGGGATATCATACAGGAAACCAAGAAAGGTCGTGCCATTATACTAACAACACATTCGATGGAAGAAGCTGATATCTTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTCCGCTGCATTGGAACCTCGATCAGGTTGAAATCCCGCTTTGGCACAGGTTTCATTGCTAACATTAGCTTTGTTGAAAGCAACAACCACAATGGCGAAGCTGGTTCGGATTCACGCGAGCCAGTGAAGAAATTCTTTAAAGATCATCTCAAAGTCAAACCAATAGAAGAAAACAAGGCCTTCATGACTTTTGTTATACCTCACGACAAAGAGAATCTTTTGACAAGCTTTTTCGCTGAGCTTCAAGACAGAGAAGAAGAATTTGGAATCTCAGATATCCAACTTGGTCTTGCTACTCTTGAAGAAGTCTTTTTGAACATAGCAAGAAAAGCTGAACTCGAAAGCGCTGCGGTTGATGGAACAATGGTCACTCTCGACTTAACATCTGGTTCTTCAGTCGAGATACCGGTAGGGGCAAGATTTATCGGGATACCGGGAACAGAAACTGCAGAGAATCCACGAGGAGTCATGGTGGAGGTGTATTGGCAACAAGACGAGTCAGGATCATTGTGCATCTCAGGACACTCCACAGAGATGCCAATTCCTGAAAACATTCCCGTGACAGATCCGGTGGCACCAGGACATGGCGGAGTAAACTTGTTGGGACGGAGAGGACGAAGACAAGTTCAGGGAATTGTGATTGATCCTGAGTTTGCTACTTTTACTAGAAGCGGTTCCACTTCTTCCCGACGTTTTTCTAGAAGCGGTTCTTCCCGACGTTTTTCATCGTGA
Protein Sequence
- >AT3G47730.1
MTLQRGLPLLLQQYTALFKKNLLLSWRSKRATFLQLFASFFFILLIFCIQAAMEKSFASSTALKTVTDPTALISPPIPPCEDKFFVNLPCYDFVWSGNRSSKVTQIVNAIMKNNPGRSIPIEKVRSFVDPEAVDTWLMANPLLVPGALHFIERNATVISYGIQTNSTPEMNRGRFEDPTFKFQIPLQIAAEREIARSLIGDPNFNWVVGFKEFPHPTIEAIVALDTIGPTFFLAVAMFGFVLQISSLITEKELKLRQAMTMMGVFDTAYWLSWLTWEGILTAISALLTVLFGMMFQFDFFLKNSFPVVFLLFMLFQFNLIGLAFMLSAFISKSTSATTVGFFVFLVGFVTQLATSSGFPYAKKYSRMIRALWSLFPPNTFSQGLKLLADATSTPQDPGISWSKRAECGPNDDTGCVLTINDIYLWLLGTFFLWFVLALYFDNITPNASGVRKSIFYFLKPGYWTGKGGNRVEEGGICSCIGSVPPVDHITPDDEDVLEEETLVKQHSMEGLVDPNVAVQIRGLAKTYPGTTKFGCCKCKKTSPFHALKGLWMNIAKDQLFCLLGPNGAGKTTTINCLTGLFPVTGGDALIYGNSIRSSVGMSNIRKMIGVCPQFDILWDALSGEEHLKLFASIKGLPPSSINSMVEKSLAEVKLTEAGKIRAGSYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQETKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFVESNNHNGEAGSDSREPVKKFFKDHLKVKPIEENKAFMTFVIPHDKENLLTSFFAELQDREEEFGISDIQLGLATLEEVFLNIARKAELESAAVDGTMVTLDLTSGSSVEIPVGARFIGIPGTETAENPRGVMVEVYWQQDESGSLCISGHSTEMPIPENIPVTDPVAPGHGGVNLLGRRGRRQVQGIVIDPEFATFTRSGSTSSRRFSRSGSSRRFSS