Information report for AT3G47480
Gene Details
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Functional Descriptions
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009507 — located in — chloroplast
- GO:0005509 — enables — calcium ion binding
- GO:0008150 — involved in — biological_process
- CS72194 — Plants are highly resistant to infection by Pseudomonas syringae pv. maculicola ES4326. Elevated flg22-induced CBP60g expression, pattern-triggered immunity (PTI) and salicylic acid accumulation.
- CS72195 — Spontaneous chlorosis under highly moist conditions (humidity approximately 80%). Reduced rosette size. Plants are highly resistant to infection by Pseudomonas syringae pv. maculicola ES4326. Elevated salicylic acid accumulation, flg22-induced pattern-triggered immunity (PTI) and sustained CBP60g expression.
Functional Keywords
Literature and News
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture. DOI: 10.1007/s00425-007-0565-4 ; PMID: 17581762
- Co-expression and promoter content analyses assign a role in biotic and abiotic stress responses to plant natriuretic peptides. DOI: 10.1186/1471-2229-8-24 ; PMID: 18307823
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Different Modes of Negative Regulation of Plant Immunity by Calmodulin-Related Genes. DOI: 10.1104/pp.17.01209 ; PMID: 29449432
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
Gene Resources
- UniProt: A0A7G2ETA9
- EMBL: LR881468
- AlphaFoldDB: A0A7G2ETA9
- EnsemblPlants: AT3G47480.1
- Gramene: AT3G47480.1
- KEGG: ath:AT3G47480
- Orthologous matrix: QKICRNG
- ExpressionAtlas: AT3G47480
- InterPro: IPR002048, IPR011992, IPR018247
- PANTHER: PTHR10891
- SUPFAM: SSF47473
- PROSITE: PS00018, PS50222
- Gene3D: 1.10.238.10
- SWISS-MODEL: A0A7G2ETA9
- Conserved Domain Database: cd00051
Homologs
- Actinidia chinensis Achn137791
- Brachypodium distachyon BRADI_2g31900v3
- Citrus sinensis orange1.1g027506m.g
- Hordeum vulgare HORVU1Hr1G029850, HvCaM1
- Oryza sativa OsEFH1, OsCam1-2;OsCam1, OsCam3
- Ricinus communis 28838.t000006
- Triticum aestivum TraesCS1B02G148000
Sequences
cDNA Sequence
- >AT3G47480.1
AATACTTTCAATTGAATTGCGGTGAGTTTTAAAGTAGCATTTTTCTTTCCTTTGGTAAGTTTCTCAACAATTTACATGGAGACTCTTTCCGCAGACTTTGTGAGTAAGATATGTTTTGGTCTTCGTATACTTAACTAGGAATTATAAAATAGGACCAACTCAACACACTTATTATCCAACCTTTGAAACCAAAGAAGACAAATAAAAGCTTCATAGAAATTTTGTTTATGGTATTCCACACACATAAATTTAGATCAATATGGAGGATTCGTCTCTTCTTAGCCCAATCTCTCTCCTCACCATTGTCATCTTCTTATTCATTCTCAATCTCATGATGATAATTCAAGACTTCTCTTCTTCTTTTCCCTTTCGTTTCCATCTCTTCTTCTCTAATGCCTACATTCTCTTCACCTCAATAAGAAACAATAAGCAAAATACCGAGCTCCCAATCATAAAGAAAGTTGTTGTCCCAAATCGAGCAGATATCAAAACGTCCGTGGAAGAAGTCAAGGCGATAATCGATGACTCGGAAGCTTTATACGAATGTTTGATTGAAGAAGGAGAAGAGTACTTGCTTGAGAAGAATGAGATGATGGGTAAGGAGATAGTTAAAGAGGCGTTTAGGTTATTTGATGAGAATCAGGATGGGTTTATAGATGAAAATGAGTTAAAACATGTGTTGAGTTTGTTAGGATACGATGAGTGTACAAAGATGGAGTGTAGGAAGATGGTTAAGGTTTATGATGAGAATAGAGATGGAAAAATTGATTTTTATGAGTTTGTGAAGCTTATAGAGAAGAGCTTTTCGTGAAGTAGATTGGAATAATAATAATAGTTATGTTGTTGGCTAATTATACGACTTGTCTAATATATTTCTTCTTCTTTAGTGGGTCGTCCTCTAATGAACTTTATTTTCCTCTGACAAACTTATTTACGTTGATATATTCATGCTTCTCTGAATTTCCAAGAAAGTGATAATATATGACAACGTAAACTTAAATTTGTGATGAATTTTGCATGGTGATTTCCAGTTAGGTTTGGATATCGTCTTTATCTATAATATTGAAGGGAAAAAAGTAT
CDS Sequence
- >AT3G47480.1
ATGGAGGATTCGTCTCTTCTTAGCCCAATCTCTCTCCTCACCATTGTCATCTTCTTATTCATTCTCAATCTCATGATGATAATTCAAGACTTCTCTTCTTCTTTTCCCTTTCGTTTCCATCTCTTCTTCTCTAATGCCTACATTCTCTTCACCTCAATAAGAAACAATAAGCAAAATACCGAGCTCCCAATCATAAAGAAAGTTGTTGTCCCAAATCGAGCAGATATCAAAACGTCCGTGGAAGAAGTCAAGGCGATAATCGATGACTCGGAAGCTTTATACGAATGTTTGATTGAAGAAGGAGAAGAGTACTTGCTTGAGAAGAATGAGATGATGGGTAAGGAGATAGTTAAAGAGGCGTTTAGGTTATTTGATGAGAATCAGGATGGGTTTATAGATGAAAATGAGTTAAAACATGTGTTGAGTTTGTTAGGATACGATGAGTGTACAAAGATGGAGTGTAGGAAGATGGTTAAGGTTTATGATGAGAATAGAGATGGAAAAATTGATTTTTATGAGTTTGTGAAGCTTATAGAGAAGAGCTTTTCGTGA
Protein Sequence
- >AT3G47480.1
MEDSSLLSPISLLTIVIFLFILNLMMIIQDFSSSFPFRFHLFFSNAYILFTSIRNNKQNTELPIIKKVVVPNRADIKTSVEEVKAIIDDSEALYECLIEEGEEYLLEKNEMMGKEIVKEAFRLFDENQDGFIDENELKHVLSLLGYDECTKMECRKMVKVYDENRDGKIDFYEFVKLIEKSFS