Information report for AT3G47440
Gene Details
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Functional Descriptions
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0015250 — enables — water channel activity
- GO:0006833 — involved in — water transport
- GO:0048235 — acts upstream of or within — pollen sperm cell differentiation
- GO:0015840 — acts upstream of or within — urea transport
- GO:0005739 — located in — mitochondrion
- GO:0015204 — enables — urea transmembrane transporter activity
- GO:0016020 — is active in — membrane
- GO:0005576 — located in — extracellular region
- GO:0090406 — located in — pollen tube
- SALK_085801 — Increases in the hypocotyl elongation stimulated by high-B or GA3 are compromised.
- tip5;1-2 — Increases in the hypocotyl elongation stimulated by high-B or GA3 are compromised.
Functional Keywords
- plant embryo , sepal , flower , collective leaf structure , pollen , root , vascular leaf , flower , pollen tube cell , pollen
Literature and News
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis. DOI: 10.1038/sj.emboj.7600337 ; PMID: 15282545
- Integrating membrane transport with male gametophyte development and function through transcriptomics. DOI: 10.1104/pp.105.074708 ; PMID: 16607029
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis. DOI: 10.1105/tpc.110.081059 ; PMID: 21285328
- Aquaporin AtTIP5;1 as an essential target of gibberellins promotes hypocotyl cell elongation in Arabidopsis thaliana under excess boron stress. DOI: 10.1071/FP16444 ; PMID: 32290954
- Whole gene family expression and drought stress regulation of aquaporins. DOI: 10.1007/s11103-005-0352-1 ; PMID: 16235111
- Expression and inhibition of aquaporins in germinating Arabidopsis seeds. DOI: 10.1093/pcp/pcj094 ; PMID: 16926168
Gene Resources
- UniProt: A0A654FI99
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A654FI99
- EnsemblPlants: AT3G47440.1
- Gramene: AT3G47440.1
- KEGG: ath:AT3G47440
- Orthologous matrix: VPTAMFY
- ExpressionAtlas: AT3G47440
- InterPro: IPR000425, IPR022357, IPR023271
- PANTHER: PTHR45665, PTHR45665:SF27
- SUPFAM: SSF81338
- PROSITE: PS00221
- Gene3D: 1.20.1080.10
- OrthoDB: A0A654FI99
- SWISS-MODEL: A0A654FI99
Homologs
- Oryza sativa OsTIP3;1, OsPIP2;5, OsPIP2;2, OsPIP1;2, OsPIP2;4, OsPIP2;3, RWC3;OsPIP1;3, OsPIP2;7, OsPIP2;6, OsNIP1;1, OsNIP1;2, Lsi1;OsNIP2;1, OsPIP2;1, Lsi6, OsNIP3;1;DTE1, OsPIP1;1;RWC1, OsNIP3;3
- Triticum aestivum TaAQP8
Sequences
cDNA Sequence
- >AT3G47440.1
AACGATGCAATACTCACTAAAGAAACAGAAACAGAGATAATTTTTTCGAAAGAAATTGATGAGAAGAATGATTCCAACATCGTTTTCAAGTAAGTTTCAAGGAGTACTAAGTATGAATGCGTTGAGATGTTATGTATCAGAGTTTATCTCAACCTTCTTCTTCGTCCTCGCAGCCGTTGGTTCTGTCATGTCTTCAAGGAAATTGATGGCTGGTGATGTGTCTGGTCCGTTTGGTGTTTTAATACCGGCGATTGCTAATGCGTTGGCGTTATCATCGTCAGTTTACATCTCTTGGAACGTCTCTGGTGGTCATGTGAATCCAGCGGTTACGTTTGCGATGGCTGTTGCTGGTCGGATTAGCGTTCCAACCGCTATGTTTTATTGGACTTCTCAGATGATTGCCTCTGTTATGGCTTGCCTTGTTCTTAAAGTAACCGTCATGGAACAGCACGTACCGATTTATAAGATTGCTGGAGAAATGACTGGATTTGGAGCATCTGTTCTTGAAGGTGTTTTAGCTTTCGTCTTGGTTTATACTGTGTTCACGGCTAGCGATCCCAGACGTGGGCTACCTTTAGCAGTGGGACCTATATTTATAGGGTTTGTTGCGGGAGCCAATGTTCTAGCCGCTGGTCCATTCTCTGGAGGTTCAATGAATCCTGCGTGTGCCTTTGGGTCGGCGATGGTTTACGGAAGCTTTAAGAACCAAGCTGTGTATTGGGTTGGGCCTCTGCTTGGAGGAGCCACAGCTGCTTTAGTGTATGATAACGTGGTGGTCCCTGTAGAAGATGATCGTGGTTCATCTACTGGTGATGCCATTGGTGTGTAATGACTTGTTTATACTGTTTCATTTGTTGAATTGTTGATGTAGATCTTTTTTAATTTTCAGTTTCTGAAATGTTGTTGACTAGATGTTTAATTCCTTGAATGCTATGTTACTTAAGTAGATTTCATTACAAACAATTTACTATTTTGTTACATATAACTCTGGTTTGTGATA
CDS Sequence
- >AT3G47440.1
ATGAGAAGAATGATTCCAACATCGTTTTCAAGTAAGTTTCAAGGAGTACTAAGTATGAATGCGTTGAGATGTTATGTATCAGAGTTTATCTCAACCTTCTTCTTCGTCCTCGCAGCCGTTGGTTCTGTCATGTCTTCAAGGAAATTGATGGCTGGTGATGTGTCTGGTCCGTTTGGTGTTTTAATACCGGCGATTGCTAATGCGTTGGCGTTATCATCGTCAGTTTACATCTCTTGGAACGTCTCTGGTGGTCATGTGAATCCAGCGGTTACGTTTGCGATGGCTGTTGCTGGTCGGATTAGCGTTCCAACCGCTATGTTTTATTGGACTTCTCAGATGATTGCCTCTGTTATGGCTTGCCTTGTTCTTAAAGTAACCGTCATGGAACAGCACGTACCGATTTATAAGATTGCTGGAGAAATGACTGGATTTGGAGCATCTGTTCTTGAAGGTGTTTTAGCTTTCGTCTTGGTTTATACTGTGTTCACGGCTAGCGATCCCAGACGTGGGCTACCTTTAGCAGTGGGACCTATATTTATAGGGTTTGTTGCGGGAGCCAATGTTCTAGCCGCTGGTCCATTCTCTGGAGGTTCAATGAATCCTGCGTGTGCCTTTGGGTCGGCGATGGTTTACGGAAGCTTTAAGAACCAAGCTGTGTATTGGGTTGGGCCTCTGCTTGGAGGAGCCACAGCTGCTTTAGTGTATGATAACGTGGTGGTCCCTGTAGAAGATGATCGTGGTTCATCTACTGGTGATGCCATTGGTGTGTAA
Protein Sequence
- >AT3G47440.1
MRRMIPTSFSSKFQGVLSMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVFTASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYDNVVVPVEDDRGSSTGDAIGV