Information report for AT3G47400
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- GO:0042545 — involved in — cell wall modification
- GO:0030599 — enables — pectinesterase activity
- GO:0045490 — involved in — pectin catabolic process
- GO:0005576 — located in — extracellular region
- GO:0046910 — enables — pectinesterase inhibitor activity
Literature and News
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily. DOI: 10.3389/fpls.2022.863892 ; PMID: 35401607
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
Gene Resources
- UniProt: A0A7G2EUL4
- EMBL: LR881468
- AlphaFoldDB: A0A7G2EUL4
- EnsemblPlants: AT3G47400.1
- Gramene: AT3G47400.1
- KEGG: ath:AT3G47400
- Orthologous matrix: RCAFQGY
- ExpressionAtlas: AT3G47400
- InterPro: IPR000070, IPR006501, IPR011050
- PANTHER: PTHR31707
- SUPFAM: SSF101148, SSF51126
- PROSITE: PS00503
- Gene3D: 1.20.140.40, 2.160.20.10
- SWISS-MODEL: A0A7G2EUL4
- Conserved Domain Database: cd15798
Homologs
- Actinidia chinensis CEY00_Acc01461
- Citrullus lanatus Cla97C05G089160
- Cucumis melo MELO3C006817
- Cucumis sativus CsGy3G016050
- Daucus carota DCAR_014626
- Gossypium hirsutum Gohir.A03G058100
- Manihot esculenta MANES_08G053200
- Medicago truncatula Medtr4g035980, Medtr7g053360, Medtr3g008720, Medtr3g033690, Medtr3g008700
- Nicotiana attenuata A4A49_12311
- Populus trichocarpa POPTR_015G127700v3
- Prunus persica PRUPE_2G278300
- Solanum lycopersicum Solyc03g083870.3
- Solanum tuberosum PGSC0003DMG400018037
- Vitis vinifera VIT_16s0022g00700
Sequences
cDNA Sequence
- >AT3G47400.1
AGAAAACAATTATTAACTAATTTAATATACAAAACTAAATTCCCTTTAATTAGTTAAGACATCACACCAAGAAACTTCTCAATTCCCCATACAAACTCATACCCAAGAACTTCAAAAAAATGCTTAGAGGCATCTTTCACATTTGCCTCTTGGCCTCATTTCTTCTTCTACCGTTCTCCTCCGCCGTACATGATAGTGGCTTCACCGGTGGTACCGATGCTCCTCCTCCGTGGGACCATAATGTTTCCCCACCACCAGAAACCGCACCATCCCCAACCCCCACCTCGAGTCCCTCTACAACCTCACCGCCATCTCCTGGACCGGTGGCTGCGCCATCTCCGATCAACAACGGCTCTGTCTCCGGGGACATGACATGGTGGTGCAACAAGACTCCACACGCTGAGACATGCAATTACTACTTCCGGAAGAGCTCACAAAACAACATTAACCTACGACCACCAAGGTTCCGGTCCGAGTTCTTACGGATGCTGGTCAAGGTAGCACTTGACCAAGCCGTGATCACACACAGTCAAACCGTTAAGTTTGGACCGAGCTGCACCAACAACCAAAGGAAAGCCGCTTGGTCAGACTGCGTAAATCTCTTCCAAAACACGGTGGCTCAGCTGAACCGAACGCTCAAGGGACTTAACCCGGCGGCTTCGAGTGATGTCAAATGTACGGACTTCGACGCACAAACGTGGCTCAGCACGGCTCAGACCAACATCGAGACGTGCCGTTCCGGATCCGAGGATCTTAACGTCTCGGATTTCGTCATGCCGGTGATATCCAACAAGAACTTGTCGGATTTGATTGGAAACTGCTTGGCCGTCAATGGAGTTCTCATGAAGCAACATGATCATACGACTACTGCTAACCACAAAGAATACTTCCCAAGCTGGGTTTCAAGACATGAGAGACGATTACTCGTATCAGCCTCTTTAGCGAAATCGAGTCCCCACCTAGTGGTGGCACAAGACAGGTCCGGCCATTTCCGGTCGATCCAAGCTGCCATAAACTTCGCAGCGAGAAGGAGATTCAAGTCAAGATTTGTGATATATGTGAAGAAAGGTGTTTACCGAGAGAACATTGATGTCGGCAATGATAACCACAACATCATGCTCGTCGGAGATGGCGAGAGAAAAACAATCATCACAAGTGGCCGAAGCGTCCAGCATGGCTACACCACCTATAACTCTGCAACCGGCGGCTTTGGAGGCCAAAGGTTTGTAGCAAAAGACATGACATTCATCAACACGGCCGGGCCATTACGTGGGCAAGCTGTTGCGGTTCGATCATCCTCTGACCTCTCTGTTTTCTACCGTGTCGGTATCCATGGATTCCAAGACACCCTCTACATCCATTCACAACGCCAGTTCTTTAGGGAATGTTATATCTCAGGCACCATCGACTTCATCTTCGGAAATGCAGCTGTTGTCTTCCAGAACTGCATGATTCTCGTCCGGCGCCCTCTTCATGGCCAAGCCAACATCATAACAGCTCAAGGTCGTGGTGACCCTTTTCAGAACACAGGAATAACAATCCATAGCTCAAGGATAATTGCAGCTTCTGATTTGAAGCCTGTGATCCGAGCTTACAAGACCTATTTAGGCCGACCGTGGCAAGCTTATTCACGCGTCACAATCATGAAGACCTATATAGATAACTCGATCAGCCCCTTGGGATGGTCTCCTTGGTTAAGAGGATCCAATTTTGCTCTTAATACAGTTTTCTATGGAGAGTATAAAAATTTTGGACCGGGGTCTTCCACAAGATGGCGGGTCCGGTGGAAAGGATTCCACGCCATAACGAGCACCGCGGTTGCTTCTCGGTTTACGGTTGGAAGCCTTATAGCCGGCGGTTCATGGTTGCCAGCCACTGGCGTGCCTTTCAAGTCAGGGTTGTGAGGAGAGTCAGCATGTCCTATATTAAAGACTAAACAATGTGTAATGTGTGTATGTGATCCTTGTTTTATTTATTACTGATTTATTTATCACCTTTTTATATTGTTTTCAACAAACAAACAAAAAAATCATTCTAATTATAGAGACAGTGGTACATATCTGGTATACTATACACTTGGTCCTCCTTGAAATCTGAAACAGAAGCTTTGATCAATGTTACAAAATTTTCACTG
CDS Sequence
- >AT3G47400.1
ATGCTTAGAGGCATCTTTCACATTTGCCTCTTGGCCTCATTTCTTCTTCTACCGTTCTCCTCCGCCGTACATGATAGTGGCTTCACCGGTGGTACCGATGCTCCTCCTCCGTGGGACCATAATGTTTCCCCACCACCAGAAACCGCACCATCCCCAACCCCCACCTCGAGTCCCTCTACAACCTCACCGCCATCTCCTGGACCGGTGGCTGCGCCATCTCCGATCAACAACGGCTCTGTCTCCGGGGACATGACATGGTGGTGCAACAAGACTCCACACGCTGAGACATGCAATTACTACTTCCGGAAGAGCTCACAAAACAACATTAACCTACGACCACCAAGGTTCCGGTCCGAGTTCTTACGGATGCTGGTCAAGGTAGCACTTGACCAAGCCGTGATCACACACAGTCAAACCGTTAAGTTTGGACCGAGCTGCACCAACAACCAAAGGAAAGCCGCTTGGTCAGACTGCGTAAATCTCTTCCAAAACACGGTGGCTCAGCTGAACCGAACGCTCAAGGGACTTAACCCGGCGGCTTCGAGTGATGTCAAATGTACGGACTTCGACGCACAAACGTGGCTCAGCACGGCTCAGACCAACATCGAGACGTGCCGTTCCGGATCCGAGGATCTTAACGTCTCGGATTTCGTCATGCCGGTGATATCCAACAAGAACTTGTCGGATTTGATTGGAAACTGCTTGGCCGTCAATGGAGTTCTCATGAAGCAACATGATCATACGACTACTGCTAACCACAAAGAATACTTCCCAAGCTGGGTTTCAAGACATGAGAGACGATTACTCGTATCAGCCTCTTTAGCGAAATCGAGTCCCCACCTAGTGGTGGCACAAGACAGGTCCGGCCATTTCCGGTCGATCCAAGCTGCCATAAACTTCGCAGCGAGAAGGAGATTCAAGTCAAGATTTGTGATATATGTGAAGAAAGGTGTTTACCGAGAGAACATTGATGTCGGCAATGATAACCACAACATCATGCTCGTCGGAGATGGCGAGAGAAAAACAATCATCACAAGTGGCCGAAGCGTCCAGCATGGCTACACCACCTATAACTCTGCAACCGGCGGCTTTGGAGGCCAAAGGTTTGTAGCAAAAGACATGACATTCATCAACACGGCCGGGCCATTACGTGGGCAAGCTGTTGCGGTTCGATCATCCTCTGACCTCTCTGTTTTCTACCGTGTCGGTATCCATGGATTCCAAGACACCCTCTACATCCATTCACAACGCCAGTTCTTTAGGGAATGTTATATCTCAGGCACCATCGACTTCATCTTCGGAAATGCAGCTGTTGTCTTCCAGAACTGCATGATTCTCGTCCGGCGCCCTCTTCATGGCCAAGCCAACATCATAACAGCTCAAGGTCGTGGTGACCCTTTTCAGAACACAGGAATAACAATCCATAGCTCAAGGATAATTGCAGCTTCTGATTTGAAGCCTGTGATCCGAGCTTACAAGACCTATTTAGGCCGACCGTGGCAAGCTTATTCACGCGTCACAATCATGAAGACCTATATAGATAACTCGATCAGCCCCTTGGGATGGTCTCCTTGGTTAAGAGGATCCAATTTTGCTCTTAATACAGTTTTCTATGGAGAGTATAAAAATTTTGGACCGGGGTCTTCCACAAGATGGCGGGTCCGGTGGAAAGGATTCCACGCCATAACGAGCACCGCGGTTGCTTCTCGGTTTACGGTTGGAAGCCTTATAGCCGGCGGTTCATGGTTGCCAGCCACTGGCGTGCCTTTCAAGTCAGGGTTGTGA
Protein Sequence
- >AT3G47400.1
MLRGIFHICLLASFLLLPFSSAVHDSGFTGGTDAPPPWDHNVSPPPETAPSPTPTSSPSTTSPPSPGPVAAPSPINNGSVSGDMTWWCNKTPHAETCNYYFRKSSQNNINLRPPRFRSEFLRMLVKVALDQAVITHSQTVKFGPSCTNNQRKAAWSDCVNLFQNTVAQLNRTLKGLNPAASSDVKCTDFDAQTWLSTAQTNIETCRSGSEDLNVSDFVMPVISNKNLSDLIGNCLAVNGVLMKQHDHTTTANHKEYFPSWVSRHERRLLVSASLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL