Information report for AT3G47060
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0004176 — enables — ATP-dependent peptidase activity
- GO:0009941 — located in — chloroplast envelope
- GO:0004222 — enables — metalloendopeptidase activity
- GO:0009507 — located in — chloroplast
- GO:0009534 — is active in — chloroplast thylakoid
- GO:0008270 — enables — zinc ion binding
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0006508 — involved in — proteolysis
Functional Keywords
Literature and News
- Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. DOI: 10.1104/pp.125.4.1912 ; PMID: 11299370
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Coordinated regulation and complex formation of yellow variegated1 and yellow variegated2, chloroplastic FtsH metalloproteases involved in the repair cycle of photosystem II in Arabidopsis thylakoid membranes. DOI: 10.1105/tpc.017319 ; PMID: 14630971
- The Arabidopsis FtsH metalloprotease gene family: interchangeability of subunits in chloroplast oligomeric complexes. DOI: 10.1111/j.1365-313x.2003.02014.x ; PMID: 14996218
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- FtsH proteases located in the plant chloroplast. DOI: 10.1111/j.1399-3054.2011.01548.x ; PMID: 22121866
- Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. DOI: 10.1104/pp.125.4.1912 ; PMID: 11299370
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
Gene Resources
Homologs
- Actinidia chinensis Achn109391, Achn040601
- Capsicum annuum T459_28905
- Fragaria vesca FvH4_2g31730
- Glycine max GmFtsH25, GLYMA_17G228100
- Oryza sativa OsFtsH2
- Panicum virgatum Pavir.3KG205700
- Saccharum spontaneum Sspon.07G0000160-1T
- Triticum aestivum Traes_5DL_6DC80163A, Traes_3AL_D198AF113
Sequences
cDNA Sequence
- >AT3G47060.1
CTTCATTGAAAATTAGACAGATCGATATAAATGTGTTACCTTTGATTTCCCCAATTTCTAGGGTTTCGAAATAATGACTACTACATTCGAATTTCTGCAACCAAGAATCCACGGATTTGCAACTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTTCAACGATCGTTGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAATCACGCTTCCTCTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGGTTTTCAAGAAAGAAGAGTAGATTAGTTGTGAATTGTCAAGAAGATGATCAGAACGAGAGTTCTAGTGAGGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCGGAGAGGAAAAGAGAGAAGAAAGAAGATAAGGTGTGGTGGTCAAAGGGCAAGAAATGGCAGTGGCAGCCAATAATCCAAGCGCAAGGGATTGGAGTTTTGTTGTTGCAATTGAGTGTTGTTATGTTTGTGATGCGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCTCGAATTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTTAAGAGATGATGGGAAGTGGCAAGAGAGTGAAACTAGTAGGTTGTCTCAGTCGTCTGAATCGTTGTTAAGAACTGTGGCTCCTACGAAAAGGGTTGTGTATTCCACTACTAGGCCGGGTGATATCAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGATCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGCATTGATAGCTCTTTTCTACATAGCGGTACTTGCTGGGCTTATTCGATTCCCTGTTAGCTTCTCCACGAGTTCAACCGGCCAGCTTAGGACCCGAAAGGCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGAGGTGAAACAATCACTTTTGCGGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAATCGTGGAATTTCTTAGGAATCCTGAAAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTGGTGTCCTATTGGTTGGTCTTCCCGGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTGGGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCGGTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAAGCTCCATCGATTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGAATGGGGAGCAACGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGCAATTCTGCGGTTATCGTTCTTGGAGCTACAAATCGTGCCGATGTCTTAGATCCGGCCCTGCGTCGTCCTGGGAGATTTGATCGTGTTGTTACGGTGGAAACGCCAGACAAAATTGGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGATGTCAACCTCGGTAGTATTGCCTCAATGACCACTGGTTTCACGGGGGCAGATCTTGCAAACTTGGTAAATGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGAACGTTGAGAAAATTGACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTAAAAGGCAATGAGAAGGCAGTGGTCGCAAGGCATGAAGCTGGGCATGCAGTGGTTGGTACCGCTGTTGCAAATCTTCTTACTGGACAGCCACGTGTTGAGAAATTAAGCATATTGCCAAGAACAGGAGGGGCATTGGGATTTACATACATTCCTCCTACTAGTGAAGACAGATATTTACTCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGGTCGTGCAGCTGAAGAAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGATGATATAAGGCGGGCAACTGATATGGCATACAAGGCAGTAGCTGAATACGGTCTTAACCAAAAAATCGGACCTGTGTCTGTGGCTACACTTTCTGGTGGTGGGATTGACGATTCTGGAGGCTCGCCATGGGGAAGAGATCAGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTTACAATCTGCTCTCGATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGGGCTTGGTGCTCAACTTGAAGAGAAAGAGAAAGTAGAAGGTGAAGAACTGCAGAAGTGGTTAAGCATGGTGGTTGCACCAGAAGAACTCGCAGTCTTTGTCGAAGGAAAGCAAGAGCTTTTGCTCCCAGCACAAGCTAGCTCCAGTTAACAACTACTCTGTTCTATCATCAATTATAGCTATAAAGACAGTATCTAACACGGATCATCAGCTCTTTCCTTGCTGCCTTCTGTATCTCCAGGTCAGATCTGGTTATCACCATTGCCCTTTAGCATCCATGGTTCCAGCATGCATAGAACACTTGAATCAAACTTGAAGAACCATATTGGGATATGACTTTTGGTGATAACTCATAGATTTTGGTGGATGTGTTTTAAGATTTGGTATTCTTGCTAGATACAGTCTCTTTAACTTGGCAAAAAAGTGTATAATTGATTCATATGTATAAAAAGCCAGACTGATATGTGTAAAGATCTTAAAGACCCCCACAAAAGGTTGCAACA
CDS Sequence
- >AT3G47060.1
ATGACTACTACATTCGAATTTCTGCAACCAAGAATCCACGGATTTGCAACTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTTCAACGATCGTTGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAATCACGCTTCCTCTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGGTTTTCAAGAAAGAAGAGTAGATTAGTTGTGAATTGTCAAGAAGATGATCAGAACGAGAGTTCTAGTGAGGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCGGAGAGGAAAAGAGAGAAGAAAGAAGATAAGGTGTGGTGGTCAAAGGGCAAGAAATGGCAGTGGCAGCCAATAATCCAAGCGCAAGGGATTGGAGTTTTGTTGTTGCAATTGAGTGTTGTTATGTTTGTGATGCGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCTCGAATTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTTAAGAGATGATGGGAAGTGGCAAGAGAGTGAAACTAGTAGGTTGTCTCAGTCGTCTGAATCGTTGTTAAGAACTGTGGCTCCTACGAAAAGGGTTGTGTATTCCACTACTAGGCCGGGTGATATCAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGATCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGCATTGATAGCTCTTTTCTACATAGCGGTACTTGCTGGGCTTATTCGATTCCCTGTTAGCTTCTCCACGAGTTCAACCGGCCAGCTTAGGACCCGAAAGGCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGAGGTGAAACAATCACTTTTGCGGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAATCGTGGAATTTCTTAGGAATCCTGAAAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTGGTGTCCTATTGGTTGGTCTTCCCGGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTGGGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCGGTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAAGCTCCATCGATTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGAATGGGGAGCAACGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGCAATTCTGCGGTTATCGTTCTTGGAGCTACAAATCGTGCCGATGTCTTAGATCCGGCCCTGCGTCGTCCTGGGAGATTTGATCGTGTTGTTACGGTGGAAACGCCAGACAAAATTGGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGATGTCAACCTCGGTAGTATTGCCTCAATGACCACTGGTTTCACGGGGGCAGATCTTGCAAACTTGGTAAATGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGAACGTTGAGAAAATTGACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTAAAAGGCAATGAGAAGGCAGTGGTCGCAAGGCATGAAGCTGGGCATGCAGTGGTTGGTACCGCTGTTGCAAATCTTCTTACTGGACAGCCACGTGTTGAGAAATTAAGCATATTGCCAAGAACAGGAGGGGCATTGGGATTTACATACATTCCTCCTACTAGTGAAGACAGATATTTACTCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGGTCGTGCAGCTGAAGAAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGATGATATAAGGCGGGCAACTGATATGGCATACAAGGCAGTAGCTGAATACGGTCTTAACCAAAAAATCGGACCTGTGTCTGTGGCTACACTTTCTGGTGGTGGGATTGACGATTCTGGAGGCTCGCCATGGGGAAGAGATCAGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTTACAATCTGCTCTCGATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGGGCTTGGTGCTCAACTTGAAGAGAAAGAGAAAGTAGAAGGTGAAGAACTGCAGAAGTGGTTAAGCATGGTGGTTGCACCAGAAGAACTCGCAGTCTTTGTCGAAGGAAAGCAAGAGCTTTTGCTCCCAGCACAAGCTAGCTCCAGTTAA
Protein Sequence
- >AT3G47060.1
MTTTFEFLQPRIHGFATCCSSNSLLYSKASRFFNDRCRVYRQNPNRFVSNSITLPLQKKQVTVLRNHERFNLWDGFSRKKSRLVVNCQEDDQNESSSEEEESSQSTPAKSERKREKKEDKVWWSKGKKWQWQPIIQAQGIGVLLLQLSVVMFVMRLLRPGIPLPGSEPRIQTTFVSVPYSEFLSKVNSNQVQKVEVDGVQVLFKLRDDGKWQESETSRLSQSSESLLRTVAPTKRVVYSTTRPGDIKTPYEKMLGNNVEFGSPEKRSGGFFNSALIALFYIAVLAGLIRFPVSFSTSSTGQLRTRKAGGPDGGKVSGGGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEGKQELLLPAQASSS