Gene Details:

• Gene ID: AT3G46970
• Gene Symbol: ATPHS2, PHS2
• Gene Name: Arabidopsis thaliana alpha-glucan phosphorylase 2, alpha-glucan phosphorylase 2
• Description: alpha-glucan phosphorylase 2;(source:Araport11)
• TAIR Accession: locus:2075576
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G46970.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0102499  — enables — SHG alpha-glucan phosphorylase activity
• GO:0016757  — enables — glycosyltransferase activity
• GO:0005980  — involved in — glycogen catabolic process
• GO:0005737  — is active in — cytoplasm
• GO:0009414  — acts upstream of or within — response to water deprivation
• GO:0030170  — enables — pyridoxal phosphate binding
• GO:0102250  — enables — linear malto-oligosaccharide phosphorylase activity
• GO:0009507  — located in — chloroplast
• GO:0005829  — located in — cytosol
• GO:0005737  — located in — cytoplasm
• GO:0004645  — enables — 1,4-alpha-oligoglucan phosphorylase activity
• GO:0008184  — enables — glycogen phosphorylase activity

Germplasm Phenotype:

• CS169185  — Apart from a slight increase in rosette leaf size, no visible phenotype was observed.

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  guard cell

Literature:

• Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins.   DOI:  10.1002/rcm.1376 ;  PMID:  15052571
• Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism.   DOI:  10.1105/tpc.104.023705 ;  PMID:  15377757
• Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves.   DOI:  10.1104/pp.104.044347 ;  PMID:  15347792
• Identification of a novel enzyme required for starch metabolism in Arabidopsis leaves. The phosphoglucan, water dikinase.   DOI:  10.1104/pp.104.055954 ;  PMID:  15618411
• Leaf starch degradation comes out of the shadows.   DOI:  10.1016/j.tplants.2005.01.001 ;  PMID:  15749471
• Starch degradation.   DOI:  10.1146/annurev.arplant.56.032604.144257 ;  PMID:  15862090
• Soluble starch synthase I: a major determinant for the synthesis of amylopectin in Arabidopsis thaliana leaves.   DOI:  10.1111/j.1365-313X.2005.02462.x ;  PMID:  16045475
• Identification, subcellular localization and biochemical characterization of water-soluble heteroglycans (SHG) in leaves of Arabidopsis thaliana L.: distinct SHG reside in the cytosol and in the apoplast.   DOI:  10.1111/j.1365-313X.2005.02475.x ;  PMID:  16098110
• Daylength and circadian effects on starch degradation and maltose metabolism.   DOI:  10.1104/pp.105.061903 ;  PMID:  16055686
• Genomewide nonadditive gene regulation in Arabidopsis allotetraploids.   DOI:  10.1534/genetics.105.047894 ;  PMID:  16172500
• Variations in CYP74B2 (hydroperoxide lyase) gene expression differentially affect hexenal signaling in the Columbia and Landsberg erecta ecotypes of Arabidopsis.   DOI:  10.1104/pp.105.067249 ;  PMID:  16258015
• The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses.   DOI:  10.1002/pmic.200500543 ;  PMID:  16502469
• The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis.   DOI:  10.1111/j.1365-313X.2006.02681.x ;  PMID:  16623895
• Cellular and organ level localization of maltose in maltose-excess Arabidopsis mutants.   DOI:  10.1007/s00425-006-0263-7 ;  PMID:  16596410
• Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics.   DOI:  10.1104/pp.106.082396 ;  PMID:  16798941
• Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field.   DOI:  10.1007/s11103-006-9041-y ;  PMID:  16941220
• The role of cytosolic alpha-glucan phosphorylase in maltose metabolism and the comparison of amylomaltase in Arabidopsis and Escherichia coli.   DOI:  10.1104/pp.106.086850 ;  PMID:  16980562
• The phenotype of soluble starch synthase IV defective mutants of Arabidopsis thaliana suggests a novel function of elongation enzymes in the control of starch granule formation.   DOI:  10.1111/j.1365-313X.2006.02968.x ;  PMID:  17217470
• Light has a specific role in modulating Arabidopsis gene expression at low temperature.   DOI:  10.1186/1471-2229-8-13 ;  PMID:  18230142
• Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes.   DOI:  10.1094/MPMI-21-2-0244 ;  PMID:  18184068
• The plant Apolipoprotein D ortholog protects Arabidopsis against oxidative stress.   DOI:  10.1186/1471-2229-8-86 ;  PMID:  18671872
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism.   DOI:  10.1186/1471-2229-8-76 ;  PMID:  18616834
• Identification of a novel heteroglycan-interacting protein, HIP 1.3, from Arabidopsis thaliana.   DOI:  10.1016/j.jplph.2010.09.008 ;  PMID:  21087810
• Starch-related cytosolic heteroglycans in roots from Arabidopsis thaliana.   DOI:  10.1016/j.jplph.2010.12.008 ;  PMID:  21269731
• γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots.   DOI:  10.1111/pce.12033 ;  PMID:  23148892
• Starch metabolism in Arabidopsis.   DOI:  10.1199/tab.0160 ;  PMID:  23393426
• Sequence variation, differential expression, and divergent evolution in starch-related genes among accessions of Arabidopsis thaliana.   DOI:  10.1007/s11103-015-0293-2 ;  PMID:  25663508
• Daylength and circadian effects on starch degradation and maltose metabolism.   DOI:  10.1104/pp.105.061903 ;  PMID:  16055686
• The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses.   DOI:  10.1002/pmic.200500543 ;  PMID:  16502469
• The role of cytosolic alpha-glucan phosphorylase in maltose metabolism and the comparison of amylomaltase in Arabidopsis and Escherichia coli.   DOI:  10.1104/pp.106.086850 ;  PMID:  16980562
• Regulation of starch metabolism in Arabidopsis leaves.   DOI:  10.1104/pp.104.900209 ;  PMID:  17151136
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: