Gene Details:
- Gene ID: AT3G46830
- Gene Symbol: ATRAB-A2C, ATRAB11A, ATRABA2C, RAB-A2C, RABA2c
- Gene Name: ARABIDOPSIS RAB GTPASE HOMOLOG A2C, RAB GTPase homolog A2C, RAB GTPASE HOMOLOG A2C, RAB GTPase homolog A2C
- Description: RAB GTPase homolog A2C;(source:Araport11)
- TAIR Accession: locus:2102777
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0009888 — acts upstream of or within — tissue development
- GO:0005794 — is active in — Golgi apparatus
- GO:0005829 — located in — cytosol
- GO:0071695 — acts upstream of or within — anatomical structure maturation
- GO:0070727 — acts upstream of or within — cellular macromolecule localization
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0003924 — enables — GTPase activity
- GO:0005525 — enables — GTP binding
- GO:0005768 — located in — endosome
- GO:0005768 — is active in — endosome
- GO:0009506 — located in — plasmodesma
- GO:0009504 — located in — cell plate
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0010015 — acts upstream of or within — root morphogenesis
- GO:0071702 — acts upstream of or within — organic substance transport
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Rab-A2 and Rab-A3 GTPases define a trans-golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate. DOI: 10.1105/tpc.107.052001 ; PMID: 18239134
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT3G46830.2
CACGATAACTGAAGTCTTTGTCTTTTTCTCAAACGCGACGTCGTTTCTATTCCCTGACACAGAGATACGTATAGATACACCGTATATTCACTTTATTGCTCCTCTCCTCTTTCTCACGAAGAAGAAGACGAAGCCCATCAAATTAAACAAGAAAAATTCCATTTTCCTCCATTGATTGTTTTATTGCGAGATCGAAGAGAGAAGGAGAAAATGACGCATAGAGTAGATCAGGAATATGATTATTTGTTTAAGATTGTGTTGATTGGTGATTCTGGTGTTGGGAAATCGAATATCTTGTCGAGATTCACCAGGAATGAGTTTTGCTTGGAATCTAAATCCACTATTGGTGTTGAATTCGCCACCAGAACTACTCAGGTTGAAGGAAAGACCATTAAGGCCCAGATCTGGGACACTGCAGGTCAGGAGAGGTACAGGGCGATCACAAGCGCGTATTACAGAGGCGCAGTGGGTGCACTTCTTGTCTACGACATTACTAAGAGACAGACCTTTGACAATGTTTTAAGGTGGCTGCGCGAACTGAGAGACCATGCAGATTCCAACATTGTGATCATGATGGCTGGGAACAAATCCGATCTGAACCACTTGAGATCCGTTGCTGAGGAAGATGGTCAAAGTTTGGCTGAGAAGGAAGGTCTCTCTTTCCTGGAGACATCTGCTCTTGAAGCAACAAACGTCGAGAAAGCGTTTCAGACCATCTTAGGTGAGATCTACCATATCATAAGCAAAAAGGCACTGGCTGCACAAGAAGCAGCAGCAGCTAATTCTGCAATCCCTGGGCAAGGAACTACGATTAACGTCGATGACACATCTGGAGGCGCGAAACGAGCATGTTGCTCTTCTTAAACTAAAGGTAAACTGTTTATTTCGGTTGCTCCTTGTTCAGAGATTCAAACTTTTGTTTTCACTGGCTTCTCTTCTTTTCAAGTTTTGGCTGATGAAACGTAACTATGCAAGACTATGTAGAATACTCTGTTTTTATTCTCTTCGGTTTGGGGTTTGTGTTCAGTTTAAAGCTTGTTAGTAGTATACTTAGAATCTTCTGGTGCTTGCTTGCTTTCCCTTCTTCTTCCCTTGGTGTGTTTCTATTGATTTCTGGTTTATAAAGTATTTTTTCTATCTCCGGTTTAGTCCGGTTCGTCTTGGCTTTGTTTAATCAAATCATTGATTCCTCTCTTATCAATGTATTGTATCCGGTTCCAAAATCCTCTCTTCATGTTACACACTGACAAGC - >AT3G46830.1
CACGATAACTGAAGTCTTTGTCTTTTTCTCAAACGCGACGTCGTTTCTATTCCCTGACACAGAGATACGTATAGATACACCGTATATTCACTTTATTGCTCCTCTCCTCTTTCTCACGAAGAAGAAGACGAAGCCCATCAAATTAAACAAGAAAAATTCCATTTTCCTCCATTGATTGTTTTATTGCGAGATCGAAGAGAGAAGGAGAAAATGACGCATAGAGTAGATCAGGAATATGATTATTTGTTTAAGATTGTGTTGATTGGTGATTCTGGTGTTGGGAAATCGAATATCTTGTCGAGATTCACCAGGAATGAGTTTTGCTTGGAATCTAAATCCACTATTGGTGTTGAATTCGCCACCAGAACTACTCAGGTTGAAGGAAAGACCATTAAGGCCCAGATCTGGGACACTGCAGGTCAGGAGAGGTACAGGGCGATCACAAGCGCGTATTACAGAGGCGCAGTGGGTGCACTTCTTGTCTACGACATTACTAAGAGACAGACCTTTGACAATGTTTTAAGGTGGCTGCGCGAACTGAGAGACCATGCAGATTCCAACATTGTGATCATGATGGCTGGGAACAAATCCGATCTGAACCACTTGAGATCCGTTGCTGAGGAAGATGGTCAAAGTTTGGCTGAGAAGGAAGGTCTCTCTTTCCTGGAGACATCTGCTCTTGAAGCAACAAACGTCGAGAAAGCGTTTCAGACCATCTTAGGTGAGATCTACCATATCATAAGCAAAAAGGCACTGGCTGCACAAGAAGCAGCAGCAGCTAATTCTGCAATCCCTGGGCAAGGAACTACGATTAACGTCGATGACACATCTGGAGGCGCGAAACGAGCATGTTGCTCTTCTTAAACTAAAGGTAAACTGTTTATTTCGGTTGCTCCTTGTTCAGAGATTCAAACTTTTGTTTTCACTGGCTTCTCTTCTTTTCAAGTTTTGGCTGATGAAACGTAACTATGCAAGACTATGTAGAATACTCTGTTTTTATTCTCTTCGGTTTGGGGTTTGTGTTCAGTTTAAAGCTTGTTAGTAGTATACTTAGAATCTTCTGGTGCTTGCTTGCTTTCCCTTCTTCTTCCCTTGGTGTGTTTCTATTGATTTCTGGTTTATAAAGTATTTTTTCTATCTCCGGTTTAGTCCGGTTCGTCTTGGCTTTGTTTAATCAAATCATTGATTCCTCTCTTATCAATGTATTGTATCCGGTTCCAAAATCCTCTCTTCATGTTACACACTGACAAGC
CDS Sequence
- >AT3G46830.2
ATGACGCATAGAGTAGATCAGGAATATGATTATTTGTTTAAGATTGTGTTGATTGGTGATTCTGGTGTTGGGAAATCGAATATCTTGTCGAGATTCACCAGGAATGAGTTTTGCTTGGAATCTAAATCCACTATTGGTGTTGAATTCGCCACCAGAACTACTCAGGTTGAAGGAAAGACCATTAAGGCCCAGATCTGGGACACTGCAGGTCAGGAGAGGTACAGGGCGATCACAAGCGCGTATTACAGAGGCGCAGTGGGTGCACTTCTTGTCTACGACATTACTAAGAGACAGACCTTTGACAATGTTTTAAGGTGGCTGCGCGAACTGAGAGACCATGCAGATTCCAACATTGTGATCATGATGGCTGGGAACAAATCCGATCTGAACCACTTGAGATCCGTTGCTGAGGAAGATGGTCAAAGTTTGGCTGAGAAGGAAGGTCTCTCTTTCCTGGAGACATCTGCTCTTGAAGCAACAAACGTCGAGAAAGCGTTTCAGACCATCTTAGGTGAGATCTACCATATCATAAGCAAAAAGGCACTGGCTGCACAAGAAGCAGCAGCAGCTAATTCTGCAATCCCTGGGCAAGGAACTACGATTAACGTCGATGACACATCTGGAGGCGCGAAACGAGCATGTTGCTCTTCTTAA - >AT3G46830.1
ATGACGCATAGAGTAGATCAGGAATATGATTATTTGTTTAAGATTGTGTTGATTGGTGATTCTGGTGTTGGGAAATCGAATATCTTGTCGAGATTCACCAGGAATGAGTTTTGCTTGGAATCTAAATCCACTATTGGTGTTGAATTCGCCACCAGAACTACTCAGGTTGAAGGAAAGACCATTAAGGCCCAGATCTGGGACACTGCAGGTCAGGAGAGGTACAGGGCGATCACAAGCGCGTATTACAGAGGCGCAGTGGGTGCACTTCTTGTCTACGACATTACTAAGAGACAGACCTTTGACAATGTTTTAAGGTGGCTGCGCGAACTGAGAGACCATGCAGATTCCAACATTGTGATCATGATGGCTGGGAACAAATCCGATCTGAACCACTTGAGATCCGTTGCTGAGGAAGATGGTCAAAGTTTGGCTGAGAAGGAAGGTCTCTCTTTCCTGGAGACATCTGCTCTTGAAGCAACAAACGTCGAGAAAGCGTTTCAGACCATCTTAGGTGAGATCTACCATATCATAAGCAAAAAGGCACTGGCTGCACAAGAAGCAGCAGCAGCTAATTCTGCAATCCCTGGGCAAGGAACTACGATTAACGTCGATGACACATCTGGAGGCGCGAAACGAGCATGTTGCTCTTCTTAA
Protein Sequence
- >AT3G46830.2
MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS - >AT3G46830.1
MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS