Information report for AT3G46130
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyl growth by blue light. DOI: 10.1046/j.1365-313x.2003.01870.x ; PMID: 14535885
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. DOI: 10.1186/1471-2164-8-281 ; PMID: 17705847
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Transcriptome profile of NO-induced Arabidopsis transcription factor genes suggests their putative regulatory role in multiple biological processes. DOI: 10.1038/s41598-017-18850-5 ; PMID: 29335449
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
Gene Resources
- UniProt: A0A178V991
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178V991
- EnsemblPlants: AT3G46130.2
- Gramene: AT3G46130.2
- Orthologous matrix: TPIMENN
- ExpressionAtlas: AT3G46130
- InterPro: IPR001005, IPR009057, IPR017930
- PANTHER: PTHR45675, PTHR45675:SF7
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A178V991
- Conserved Domain Database: cd00167
Homologs
- Brassica napus GSBRNA2T00143989001, GSBRNA2T00143990001, GSBRNA2T00107281001
- Brassica oleracea XP_013625304.1
- Brassica rapa XP_009149987.1, XP_009149988.1
- Raphanus raphanistrum RrC6879_p1
Sequences
cDNA Sequence
- >AT3G46130.2
GGACACTAAAGATCGGAATAAAGATAAGAAATCATTAGAGATTTAATATTGCGAGTGTGATATCGTGTAGACACAGCACAGTGTTGAAATTTTTACCTTATAAATATAGTATCCAAAGGATGCCATGATGAATCAAGCTGAGAAATAACTTTTTTAGTAACACGAGAGAGATAAAGAAGAGCTAAAGAGACAGAGAGATGAAAATGATGCAAGAGGAGGGAAACCGAAAAGGTCCATGGACAGAACAGGAAGACATACTTCTGGTAAATTTTGTTCACTTATTTGGAGATCGACGATGGGATTTTATAGCAAAAGTATCAGGTTTGAAGGTGGAGGGAGAAAGATAAGAATAGGTAAGGAGCCACCATTAATGAGCTAGTTTTGGTTGTAGGTTTGAACAGAACAGGAAAGAGTTGCAGGCTAAGATGGGTTAATTACCTACATCCTGGTCTCAAACGTGGCAAGATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAAAAATTTTAAGATTTAATTCATTGAGATAAATCTGTTTTATATATATGTTATATAACTTATAAATACAATAAAACCTAACGACTGTAATAGTTGGTTGATGAACACAAAAACAGCTTAAGTCTGGACTCTGTAATCATACAATGTGTAGTAGTAGTAAGTAACCAGCCTAAGTCTATGTCTAGAATGAATAAGAATAAAAGTCTTGTGATCCCACTTTCTTTTATTTGTTTGTCAATGTATAATACAACTCAATACTCTAATTCTAAAGTAAACATTTCAAAATTTCAATTTCTTTTCTCTGTTTCTTTTTGGTGACATCTCTC - >AT3G46130.3
GGACACTAAAGATCGGAATAAAGATAAGAAATCATTAGAGATTTAATATTGCGAGTGTGATATCGTGTAGACACAGCACAGTGTTGAAATTTTTACCTTATAAATATAGTATCCAAAGGATGCCATGATGAATCAAGCTGAGAAATAACTTTTTTAGTAACACGAGAGAGATAAAGAAGAGCTAAAGAGACAGAGAGATGAAAATGATGCAAGAGGAGGGAAACCGAAAAGGTCCATGGACAGAACAGGAAGACATACTTCTGGTAAATTTTGTTCACTTATTTGGAGATCGACGATGGGATTTTATAGCAAAAGTATCAGGTTTGAAGGTGGAGGGAGAAAGATAAGAATAGGTAAGGAGCCACCATTAATGAGCTAGTTTTGGTTGTAGGTTTGAACAGAACAGGAAAGAGTTGCAGGCTAAGATGGGTTAATTACCTACATCCTGGTCTCAAACGTGGCAAGATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAAAAATTTTAAGATTTAATTCATTGAGATAAATCTGTTTTATATATATGTTATATAACTTATAAATACAATAAAACCTAACGACTGTAATAGTTGGTTGATGAACACAAAAACAGCTTAAGTCTGGACTCTGTAATCATACAATGTGTAGTAGTAGTAAGTAACCAGCCTAAGTCTATGTCTAGAATGAATAAGAATAAAAGTCTTGTGATCCCACTTTCTTTTATTTGTTTGTCAATGTATAATACAACTCAATACTCTAATTCTAAAGTAAACATTTCAAAATTTCAATTTCTTTTCTCTGTTTCTTTTTGGTGACATCTCTC - >AT3G46130.1
GGACACTAAAGATCGGAATAAAGATAAGAAATCATTAGAGATTTAATATTGCGAGTGTGATATCGTGTAGACACAGCACAGTGTTGAAATTTTTACCTTATAAATATAGTATCCAAAGGATGCCATGATGAATCAAGCTGAGAAATAACTTTTTTAGTAACACGAGAGAGATAAAGAAGAGCTAAAGAGACAGAGAGATGAAAATGATGCAAGAGGAGGGAAACCGAAAAGGTCCATGGACAGAACAGGAAGACATACTTCTGGTAAATTTTGTTCACTTATTTGGAGATCGACGATGGGATTTTATAGCAAAAGTATCAGGTTTGAAGGTGGAGGGAGAAAGATAAGAATAGGTAAGGAGCCACCATTAATGAGCTAGTTTTGGTTGTAGGTTTGAACAGAACAGGAAAGAGTTGCAGGCTAAGATGGGTTAATTACCTACATCCTGGTCTCAAACGTGGCAAGATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAAAAATTTTAAGATTTAATTCATTGAGATAAATCTGTTTTATATATATGTTATATAACTTATAAATACAATAAAACCTAACGACTGTAATAGTTGGTTGATGAACACAAAAACAGCTTAAGTCTGGACTCTGTAATCATACAATGTGTAGTAGTAGTAAGTAACCAGCCTAAGTCTATGTCTAGAATGAATAAGAATAAAAGTCTTGTGATCCCACTTTCTTTTATTTGTTTGTCAATGTATAATACAACTCAATACTCTAATTCTAAAGTAAACATTTCAAAATTTCAATTTCTTTTCTCTGTTTCTTTTTGGTGACATCTCTC - >AT3G46130.4
GGACACTAAAGATCGGAATAAAGATAAGAAATCATTAGAGATTTAATATTGCGAGTGTGATATCGTGTAGACACAGCACAGTGTTGAAATTTTTACCTTATAAATATAGTATCCAAAGGATGCCATGATGAATCAAGCTGAGAAATAACTTTTTTAGTAACACGAGAGAGATAAAGAAGAGCTAAAGAGACAGAGAGATGAAAATGATGCAAGAGGAGGGAAACCGAAAAGGTCCATGGACAGAACAGGAAGACATACTTCTGGTAAATTTTGTTCACTTATTTGGAGATCGACGATGGGATTTTATAGCAAAAGTATCAGGTTTGAAGGTGGAGGGAGAAAGATAAGAATAGGTAAGGAGCCACCATTAATGAGCTAGTTTTGGTTGTAGGTTTGAACAGAACAGGAAAGAGTTGCAGGCTAAGATGGGTTAATTACCTACATCCTGGTCTCAAACGTGGCAAGATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAAAAATTTTAAGATTTAATTCATTGAGATAAATCTGTTTTATATATATGTTATATAACTTATAAATACAATAAAACCTAACGACTGTAATAGTTGGTTGATGAACACAAAAACAGCTTAAGTCTGGACTCTGTAATCATACAATGTGTAGTAGTAGTAAGTAACCAGCCTAAGTCTATGTCTAGAATGAATAAGAATAAAAGTCTTGTGATCCCACTTTCTTTTATTTGTTTGTCAATGTATAATACAACTCAATACTCTAATTCTAAAGTAAACATTTCAAAATTTCAATTTCTTTTCTCTGTTTCTTTTTGGTGACATCTCTC
CDS Sequence
- >AT3G46130.2
ATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAA - >AT3G46130.3
ATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAA - >AT3G46130.1
ATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAA - >AT3G46130.4
ATGACGCCTCAAGAAGAGCGCCTCGTCCTTGAGCTTCACGCTAAGTGGGGAAACAGGTGGTCGAAAATAGCCCGAAAATTGCCGGGACGAACGGATAACGAGATAAAGAACTACTGGAGGACTCATATGAGGAAGAAAGCTCAAGAAAAGAAGCGTCCTGTTTCCCCAACTTCCTCATTTTCCAACTGCAGCTCGTCATCTGTGACCACTACCACCACCAATACTCAAGATACATCGTGCCACTCGCGTAAATCTTCAGGGGAAGTGAGCTTTTACGACACTGGAGGTTCCCGATCCACTAGAGAGATGAATCAAGAAAACGAAGACGTGTACTCGTTGGATGATATATGGAGAGAGATTGATCACTCAGCAGTAAACATAATAAAACCGGTTAAAGACATCTACTCAGAACAAAGCCATTGCTTAAGTTACCCAAATCTAGCTTCACCATCATGGGAAAGCTCATTGGATTCTATATGGAACATGGATGCAGATAAAAGTAAGATATCGTCTTACTTTGCAAATGATCAGTTTCCTTTCTGTTTCCAACACAGTAGATCACCATGGTCGTCAGGTTAA
Protein Sequence
- >AT3G46130.2
MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWNMDADKSKISSYFANDQFPFCFQHSRSPWSSG - >AT3G46130.3
MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWNMDADKSKISSYFANDQFPFCFQHSRSPWSSG - >AT3G46130.1
MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWNMDADKSKISSYFANDQFPFCFQHSRSPWSSG - >AT3G46130.4
MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWNMDADKSKISSYFANDQFPFCFQHSRSPWSSG