Gene Details:
- Gene ID: AT3G46060
- Gene Symbol: ARA-3, ARA3, ATRAB8A, ATRABE1C, RAB8A, RABE1c
- Gene Name: RAB GTPase homolog 8A, RAB GTPase homolog 8A
- Description: RAB GTPase homolog 8A;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Germplasm Phenotype:
- rabe1c-1 — In plants were treated with ABA, stomatal aperture size was markedly larger in the mutant.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen , guard cell
Literature:
- Isolation and analysis of cDNAs encoding small GTP-binding proteins of Arabidopsis thaliana. DOI: 10.1016/0378-1119(91)90442-e ; PMID: 1748311
- The Arabidopsis Rab GTPase family: another enigma variation. DOI: 10.1016/s1369-5266(02)00307-2 ; PMID: 12393015
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Subcellular localization and functional analysis of the Arabidopsis GTPase RabE. DOI: 10.1104/pp.108.132092 ; PMID: 19233904
- Proteomic analysis reveals that the Rab GTPase RabE1c is involved in the degradation of the peroxisomal protein receptor PEX7 (peroxin 7). DOI: 10.1074/jbc.M112.438143 ; PMID: 23297417
- Novel proteins interacting with peroxisomal protein receptor PEX7 in Arabidopsis thaliana. DOI: 10.4161/psb.26829 ; PMID: 24494243
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- A ras-related small GTP-binding protein, RabE1c, regulates stomatal movements and drought stress responses by mediating the interaction with ABA receptors. DOI: 10.1016/j.plantsci.2021.110858 ; PMID: 33775364
- Arabidopsis RAB8A, RAB8B and RAB8D Proteins Interact with Several RTNLB Proteins and are Involved in the Agrobacterium tumefaciens Infection Process. DOI: 10.1093/pcp/pcab112 ; PMID: 34255832
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Sequences:
cDNA Sequence
- >AT3G46060.1
AAAAGGCCCATAAGGCTTCGTGCCTTCTTCTTTCTATATAGGCCCTTCAAAAAAGAATCCTTCTCTCTTTTTCTGCGCACTCCTTCGTTTCCAACTAACGTGCGCAGTGTATCCTATCGTGCACGCGAAGCAGACGAAGAAGAAGTAAAATAGAAGAAGCCGGGAAACAAAAGCTAAATCGGGAACTGGCGCATTTTAGTCGTCCGCCATAACCTTCGCTCTCTGATTCTTCCGATTACATCGGTTTTCTTCTCTCTCCGATTCAATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAAAAAAGTTTTAAAAGTGAAGTTTAAGTCGAAAAAAGTTTGGGGGTGAAGTGAAAAACTAAGATATCGTTGGGTGCTTATGTAATTTTTTGTTTTATGCCAACAATTCTGATTCGTTCTTCTAAATTGTCCTTCCTATTTGTACGAAGGTTTAATCGAAACTTGTATTTTTCTTTTCTATTACTGATTTTTTATGACGGTGACTGAATTGTTTATGTTGGTCATCACTTCTCTCTATATATCCTCTGTTCTTAATTTTTCTCTTGCTTCCTCTTTTATCA - >AT3G46060.3
AAAAGGCCCATAAGGCTTCGTGCCTTCTTCTTTCTATATAGGCCCTTCAAAAAAGAATCCTTCTCTCTTTTTCTGCGCACTCCTTCGTTTCCAACTAACGTGCGCAGTGTATCCTATCGTGCACGCGAAGCAGACGAAGAAGAAGTAAAATAGAAGAAGCCGGGAAACAAAAGCTAAATCGGGAACTGGCGCATTTTAGTCGTCCGCCATAACCTTCGCTCTCTGATTCTTCCGATTACATCGGTTTTCTTCTCTCTCCGATTCAATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAAAAAAGTTTTAAAAGTGAAGTTTAAGTCGAAAAAAGTTTGGGGGTGAAGTGAAAAACTAAGATATCGTTGGGTGCTTATGTAATTTTTTGTTTTATGCCAACAATTCTGATTCGTTCTTCTAAATTGTCCTTCCTATTTGTACGAAGGTTTAATCGAAACTTGTATTTTTCTTTTCTATTACTGATTTTTTATGACGGTGACTGAATTGTTTATGTTGGTCATCACTTCTCTCTATATATCCTCTGTTCTTAATTTTTCTCTTGCTTCCTCTTTTATCA - >AT3G46060.2
AAAAGGCCCATAAGGCTTCGTGCCTTCTTCTTTCTATATAGGCCCTTCAAAAAAGAATCCTTCTCTCTTTTTCTGCGCACTCCTTCGTTTCCAACTAACGTGCGCAGTGTATCCTATCGTGCACGCGAAGCAGACGAAGAAGAAGTAAAATAGAAGAAGCCGGGAAACAAAAGCTAAATCGGGAACTGGCGCATTTTAGTCGTCCGCCATAACCTTCGCTCTCTGATTCTTCCGATTACATCGGTTTTCTTCTCTCTCCGATTCAATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAAAAAAGTTTTAAAAGTGAAGTTTAAGTCGAAAAAAGTTTGGGGGTGAAGTGAAAAACTAAGATATCGTTGGGTGCTTATGTAATTTTTTGTTTTATGCCAACAATTCTGATTCGTTCTTCTAAATTGTCCTTCCTATTTGTACGAAGGTTTAATCGAAACTTGTATTTTTCTTTTCTATTACTGATTTTTTATGACGGTGACTGAATTGTTTATGTTGGTCATCACTTCTCTCTATATATCCTCTGTTCTTAATTTTTCTCTTGCTTCCTCTTTTATCA
CDS Sequence
- >AT3G46060.1
ATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAA - >AT3G46060.3
ATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAA - >AT3G46060.2
ATGGCTGCTCCACCTGCTAGAGCCAGAGCTGATTACGATTATCTCATTAAGCTTCTTTTGATTGGAGATAGCGGTGTTGGTAAAAGTTGTCTTCTTCTACGTTTCTCTGATGGATCTTTCACCACTAGCTTCATTACCACCATTGGCATTGACTTTAAGATAAGAACGATTGAGCTTGACGGTAAACGTATCAAGCTTCAGATTTGGGATACCGCTGGTCAAGAGCGGTTTCGGACTATCACCACTGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCATGCTTCGGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAGAGGGCAGTACCTACAGCAAAGGGTCAGGCTCTTGCTGATGAGTACGGAATTAAGTTCTTCGAAACAAGTGCCAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCAATAGGGAGGGACATTAAGCAGAGGCTTTCAGACACCGACTCGAGGGCAGAGCCTGCAACGATCAAGATAAGCCAAACGGACCAAGCAGCTGGAGCAGGGCAGGCCACACAGAAATCTGCATGCTGTGGAACTTAA
Protein Sequence
- >AT3G46060.1
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT - >AT3G46060.3
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT - >AT3G46060.2
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT