Information report for AT3G46010
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. DOI: 10.1105/tpc.106.041319 ; PMID: 17329565
- The ancient subclasses of Arabidopsis Actin Depolymerizing Factor genes exhibit novel and differential expression. DOI: 10.1111/j.1365-313X.2007.03257.x ; PMID: 17877706
- Promoter-proximal introns in Arabidopsis thaliana are enriched in dispersed signals that elevate gene expression. DOI: 10.1105/tpc.107.057190 ; PMID: 18319396
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. DOI: 10.1105/tpc.16.00690 ; PMID: 28123105
- Arabidopsis REM16 acts as a B3 domain transcription factor to promote flowering time via directly binding to the promoters of SOC1 and FT. DOI: 10.1111/tpj.14807 ; PMID: 32391591
- Arabidopsis AIP1-1 regulates the organization of apical actin filaments by promoting their turnover in pollen tubes. DOI: 10.1007/s11427-019-9532-0 ; PMID: 31240522
- Arabidopsis thaliana subclass I ACTIN DEPOLYMERIZING FACTORs and vegetative ACTIN2/8 are novel regulators of endoreplication. DOI: 10.1007/s10265-021-01333-0 ; PMID: 34282484
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- The ancient subclasses of Arabidopsis Actin Depolymerizing Factor genes exhibit novel and differential expression. DOI: 10.1111/j.1365-313X.2007.03257.x ; PMID: 17877706
Gene Resources
- UniProt: A0A178VEL2
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VEL2
- EnsemblPlants: AT3G46010.1
- Gramene: AT3G46010.1
- KEGG: ath:AT3G46010
- Orthologous matrix: MYIRANA
- ExpressionAtlas: AT3G46010
- InterPro: IPR002108, IPR017904, IPR029006
- PANTHER: PTHR11913
- SUPFAM: SSF55753
- PROSITE: PS51263
- Gene3D: 3.40.20.10
- SWISS-MODEL: A0A178VEL2
- Conserved Domain Database: cd11286
Homologs
- Fragaria vesca mrna26696.1-v1.0-hybrid
- Gossypium hirsutum GhADF6, GhADF6
- Oryza sativa OsADF2, OsADF3
- Triticum aestivum TaADF4, TaADF7
- Ziziphus jujuba XP_015876987.1
Sequences
cDNA Sequence
- >AT3G46010.1
ATATGGTGGACTCCCGAATAAAGTTGAAGAAAGAAAGAGAAAAGAAATTGAGAAGAAAAAAGAAAAAAAGGTGACCGTATTCTCCGTCGATTGTAGCCGCCCGAAGAAATATCTTCTCCTCTCTCGTTTAACCACGAATTTGCTCTGATATTAGTGTTTCTCTAGCCATGGCGAACGCGGCATCTGGAATGGCTGTGCATGATGATTGCAAGCTGAGATTTCTGGAACTGAAGGCTAAAAGGACACACCGTTTCATAGTTTACAAGATTGAGGAGAAGCAGAAGCAAGTTGTTGTTGAGAAAGTTGGTCAACCGATCCAAACTTACGAGGAGTTTGCAGCATGTCTTCCAGCTGATGAATGCCGTTACGCCATTTACGATTTTGACTTTGTAACTGCTGAGAATTGCCAGAAGAGCAAGATCTTCTTCATCGCGTGGTGTCCGGATATTGCTAAGGTGAGAAGCAAGATGATCTACGCGAGCTCCAAGGACAGGTTCAAGAGGGAACTAGATGGGATTCAAGTAGAGCTACAGGCAACTGATCCAACAGAGATGGATCTCGATGTTTTCAGGAGCCGTGCCAACTAAAAAGTAAAAACCAAAGTTTATTATCATCATCCCCTTGAAAGATCTATTCTCTTATTCTGTTATTTTTGAGTGATGGTACTGGTACTTGATTATGTTTTTACATTGTGTTGTGAAGTTATGAACCTATAAACAACTTCATTCTATCGGTGTTTCGGTCTTGTGTTCGATGTTGTCTTTGGTTTTAAAATGGTGTGTAAGGACCCCAAATCGTCTATTGAAGATGAACCCTTTTAGGTATATCATTGATGAAATGGATGATTAAAAGTTTCTCTCACATTTGTATGAAACAACTGTCTATAGGACAAGATTGATCTTCAGTTTTTTTATTTGGTCCACTGATTATGATTGGATTGGTCGTTTTGACCATTCATTCTTATGTTTGTTTCCAAAGAAATTGCTTGTGTTGACCACATTTGTATAGCCCCAACATGAAGTGGTACCATATCATTTAATAAACACAGA - >AT3G46010.2
ATATGGTGGACTCCCGAATAAAGTTGAAGAAAGAAAGAGAAAAGAAATTGAGAAGAAAAAAGAAAAAAAGGTGACCGTATTCTCCGTCGATTGTAGCCGCCCGAAGAAATATCTTCTCCTCTCTCGTTTAACCACGAATTTGCTCTGATATTAGTGTTTCTCTAGCCATGGCGAACGCGGCATCTGGAATGGCTGTGCATGATGATTGCAAGCTGAGATTTCTGGAACTGAAGGCTAAAAGGACACACCGTTTCATAGTTTACAAGATTGAGGAGAAGCAGAAGCAAGTTGTTGTTGAGAAAGTTGGTCAACCGATCCAAACTTACGAGGAGTTTGCAGCATGTCTTCCAGCTGATGAATGCCGTTACGCCATTTACGATTTTGACTTTGTAACTGCTGAGAATTGCCAGAAGAGCAAGATCTTCTTCATCGCGTGGTGTCCGGATATTGCTAAGGTGAGAAGCAAGATGATCTACGCGAGCTCCAAGGACAGGTTCAAGAGGGAACTAGATGGGATTCAAGTAGAGCTACAGGCAACTGATCCAACAGAGATGGATCTCGATGTTTTCAGGAGCCGTGCCAACTAAAAAGTAAAAACCAAAGTTTATTATCATCATCCCCTTGAAAGATCTATTCTCTTATTCTGTTATTTTTGAGTGATGGTACTGGTACTTGATTATGTTTTTACATTGTGTTGTGAAGTTATGAACCTATAAACAACTTCATTCTATCGGTGTTTCGGTCTTGTGTTCGATGTTGTCTTTGGTTTTAAAATGGTGTGTAAGGACCCCAAATCGTCTATTGAAGATGAACCCTTTTAGGTATATCATTGATGAAATGGATGATTAAAAGTTTCTCTCACATTTGTATGAAACAACTGTCTATAGGACAAGATTGATCTTCAGTTTTTTTATTTGGTCCACTGATTATGATTGGATTGGTCGTTTTGACCATTCATTCTTATGTTTGTTTCCAAAGAAATTGCTTGTGTTGACCACATTTGTATAGCCCCAACATGAAGTGGTACCATATCATTTAATAAACACAGA
CDS Sequence
- >AT3G46010.1
ATGGCGAACGCGGCATCTGGAATGGCTGTGCATGATGATTGCAAGCTGAGATTTCTGGAACTGAAGGCTAAAAGGACACACCGTTTCATAGTTTACAAGATTGAGGAGAAGCAGAAGCAAGTTGTTGTTGAGAAAGTTGGTCAACCGATCCAAACTTACGAGGAGTTTGCAGCATGTCTTCCAGCTGATGAATGCCGTTACGCCATTTACGATTTTGACTTTGTAACTGCTGAGAATTGCCAGAAGAGCAAGATCTTCTTCATCGCGTGGTGTCCGGATATTGCTAAGGTGAGAAGCAAGATGATCTACGCGAGCTCCAAGGACAGGTTCAAGAGGGAACTAGATGGGATTCAAGTAGAGCTACAGGCAACTGATCCAACAGAGATGGATCTCGATGTTTTCAGGAGCCGTGCCAACTAA - >AT3G46010.2
ATGGCGAACGCGGCATCTGGAATGGCTGTGCATGATGATTGCAAGCTGAGATTTCTGGAACTGAAGGCTAAAAGGACACACCGTTTCATAGTTTACAAGATTGAGGAGAAGCAGAAGCAAGTTGTTGTTGAGAAAGTTGGTCAACCGATCCAAACTTACGAGGAGTTTGCAGCATGTCTTCCAGCTGATGAATGCCGTTACGCCATTTACGATTTTGACTTTGTAACTGCTGAGAATTGCCAGAAGAGCAAGATCTTCTTCATCGCGTGGTGTCCGGATATTGCTAAGGTGAGAAGCAAGATGATCTACGCGAGCTCCAAGGACAGGTTCAAGAGGGAACTAGATGGGATTCAAGTAGAGCTACAGGCAACTGATCCAACAGAGATGGATCTCGATGTTTTCAGGAGCCGTGCCAACTAA
Protein Sequence
- >AT3G46010.1
MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN - >AT3G46010.2
MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN