Information report for AT3G46000
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Genes galore: a summary of methods for accessing results from large-scale partial sequencing of anonymous Arabidopsis cDNA clones. DOI: 10.1104/pp.106.4.1241 ; PMID: 7846151
- Large-scale identification of leaf senescence-associated genes. DOI: 10.1046/j.1365-313x.2003.01908.x ; PMID: 14617064
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Regulation of the pollen-specific actin-depolymerizing factor LlADF1. DOI: 10.1105/tpc.005363 ; PMID: 12417710
- Towards the proteome of Brassica napus phloem sap. DOI: 10.1002/pmic.200500155 ; PMID: 16400686
- The ancient subclasses of Arabidopsis Actin Depolymerizing Factor genes exhibit novel and differential expression. DOI: 10.1111/j.1365-313X.2007.03257.x ; PMID: 17877706
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A protein phosphatase 2A catalytic subunit modulates blue light-induced chloroplast avoidance movements through regulating actin cytoskeleton in Arabidopsis. DOI: 10.1093/pcp/pcs081 ; PMID: 22642987
- Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. DOI: 10.1105/tpc.16.00690 ; PMID: 28123105
- Arabidopsis thaliana subclass I ACTIN DEPOLYMERIZING FACTORs and vegetative ACTIN2/8 are novel regulators of endoreplication. DOI: 10.1007/s10265-021-01333-0 ; PMID: 34282484
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178V7X3
- EMBL: CACSHJ010000089, LR881468, LUHQ01000003
- AlphaFoldDB: A0A178V7X3
- EnsemblPlants: AT3G46000.1
- Gramene: AT3G46000.1
- KEGG: ath:AT3G46000
- Orthologous matrix: QCRFAVY
- ExpressionAtlas: AT3G46000
- InterPro: IPR002108, IPR017904, IPR029006
- PANTHER: PTHR11913
- SUPFAM: SSF55753
- PROSITE: PS51263
- Gene3D: 3.40.20.10
- OrthoDB: A0A178V7X3
- SWISS-MODEL: A0A178V7X3
- Conserved Domain Database: cd11286
Homologs
- Fragaria vesca mrna26696.1-v1.0-hybrid
- Gossypium hirsutum GhADF6, GhADF6
- Oryza sativa OsADF2, OsADF3
- Triticum aestivum TaADF4, TaADF7
- Ziziphus jujuba XP_015876987.1
Sequences
cDNA Sequence
- >AT3G46000.1
CTTATATTATGATGATTAACAGAAATAAAAATTTAACTTTGGGAAATAGTCTTATCCATATATTATTATAATAAACCAAAATGTATAGAAACATATAAACAAATGAAATTCGTTTCATTCATATAATTCGGATAGCTTGCAAATAACGCTGACAAAAAAAGAAACAGTGAAGAAGAAAAAAAAGAAGGTCATTTTCATTTTCTCCATTTGATTTTTGCCGACCGGAGAAAATATCTTCTTGCCGTCTTCTTCTTCATTTCACCAGGAACTTTTATTTGAAATCGGTTTGATTTAGCCATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAAGTAAAACAAAACCCTGTAAGGGCATTTGAATAAGTTTGGTTTCTGGAGTGAATATGTTTCCTCTGACTGTTATGAAAACTTTTTAACACCTTCAACTTCATTCTACTTGGTATTATTGTATGTCTTTGATGTGTTATGTGTGCCTTGTGATGGTTTTCAATTAGTTTTACATGTACAATACTTGAAATCAGATTGTTGCTAGGCTTCAAGCCTTGTCTCAGTTATCTATCTGATAATTTATTCGTATATGTTTGGAGTCCTATATCAAGCATCTCCTTAAATGGTTTAGATTTTGAATACTCCATGTGAGAGTGTTTAGAGTTCTCACTTTCAATAACATGTACTGATTTTCATTGTATAGAGCCCTCTCTACTCTCTATGTAATGCTAAAATAGTAAATAAATGGTCG - >AT3G46000.3
CTTATATTATGATGATTAACAGAAATAAAAATTTAACTTTGGGAAATAGTCTTATCCATATATTATTATAATAAACCAAAATGTATAGAAACATATAAACAAATGAAATTCGTTTCATTCATATAATTCGGATAGCTTGCAAATAACGCTGACAAAAAAAGAAACAGTGAAGAAGAAAAAAAAGAAGGTCATTTTCATTTTCTCCATTTGATTTTTGCCGACCGGAGAAAATATCTTCTTGCCGTCTTCTTCTTCATTTCACCAGGAACTTTTATTTGAAATCGGTTTGATTTAGCCATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAAGTAAAACAAAACCCTGTAAGGGCATTTGAATAAGTTTGGTTTCTGGAGTGAATATGTTTCCTCTGACTGTTATGAAAACTTTTTAACACCTTCAACTTCATTCTACTTGGTATTATTGTATGTCTTTGATGTGTTATGTGTGCCTTGTGATGGTTTTCAATTAGTTTTACATGTACAATACTTGAAATCAGATTGTTGCTAGGCTTCAAGCCTTGTCTCAGTTATCTATCTGATAATTTATTCGTATATGTTTGGAGTCCTATATCAAGCATCTCCTTAAATGGTTTAGATTTTGAATACTCCATGTGAGAGTGTTTAGAGTTCTCACTTTCAATAACATGTACTGATTTTCATTGTATAGAGCCCTCTCTACTCTCTATGTAATGCTAAAATAGTAAATAAATGGTCG - >AT3G46000.2
CTTATATTATGATGATTAACAGAAATAAAAATTTAACTTTGGGAAATAGTCTTATCCATATATTATTATAATAAACCAAAATGTATAGAAACATATAAACAAATGAAATTCGTTTCATTCATATAATTCGGATAGCTTGCAAATAACGCTGACAAAAAAAGAAACAGTGAAGAAGAAAAAAAAGAAGGTCATTTTCATTTTCTCCATTTGATTTTTGCCGACCGGAGAAAATATCTTCTTGCCGTCTTCTTCTTCATTTCACCAGGAACTTTTATTTGAAATCGGTTTGATTTAGCCATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAAGTAAAACAAAACCCTGTAAGGGCATTTGAATAAGTTTGGTTTCTGGAGTGAATATGTTTCCTCTGACTGTTATGAAAACTTTTTAACACCTTCAACTTCATTCTACTTGGTATTATTGTATGTCTTTGATGTGTTATGTGTGCCTTGTGATGGTTTTCAATTAGTTTTACATGTACAATACTTGAAATCAGATTGTTGCTAGGCTTCAAGCCTTGTCTCAGTTATCTATCTGATAATTTATTCGTATATGTTTGGAGTCCTATATCAAGCATCTCCTTAAATGGTTTAGATTTTGAATACTCCATGTGAGAGTGTTTAGAGTTCTCACTTTCAATAACATGTACTGATTTTCATTGTATAGAGCCCTCTCTACTCTCTATGTAATGCTAAAATAGTAAATAAATGGTCG
CDS Sequence
- >AT3G46000.1
ATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAA - >AT3G46000.3
ATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAA - >AT3G46000.2
ATGGCAAACGCGGCATCGGGAATGGCTGTGCATGATGATTGCAAGCTGAAATTTATGGAACTGAAGGCGAAAAGAACATTCCGTACCATAGTCTACAAGATTGAGGATAAGCAAGTGATTGTAGAGAAACTCGGTGAACCTGAACAATCATATGATGACTTTGCAGCTAGTCTTCCAGCTGATGATTGCCGATATTGCATTTACGATTTCGACTTTGTCACTGCGGAGAACTGCCAGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGGACACTGCCAAAGTGAGAGACAAGATGATTTACGCGAGCTCTAAAGATAGGTTCAAGAGAGAACTAGATGGAATTCAAGTGGAACTTCAAGCTACTGATCCAACAGAAATGGGTCTTGATGTTTTCAAAAGCCGCACCAACTAA
Protein Sequence
- >AT3G46000.1
MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN - >AT3G46000.3
MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN - >AT3G46000.2
MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN