Gene Details:
- Gene ID: AT3G45480
- Gene Symbol: RFA6
- Gene Name: RING finger ABA-related 6
- Description: RING/U-box protein with C6HC-type zinc finger;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Identification and characterization of the ARIADNE gene family in Arabidopsis. A group of putative E3 ligases. DOI: 10.1104/pp.012781 ; PMID: 12529512
- Altered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection. DOI: 10.1186/1471-2164-9-325 ; PMID: 18613973
- RBR-Type E3 Ligases and the Ubiquitin-Conjugating Enzyme UBC26 Regulate Abscisic Acid Receptor Levels and Signaling. DOI: 10.1104/pp.19.00898 ; PMID: 31699847
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT3G45480.1
ATGGCCCCAAACCCCACTGGAAAACCCTCACCTGACGGTTCAAGTTCTGACTCGTACAACCTTTACTTCAAGGGTTCATTGGCGGGATTTGGGGTTGCAATTTACAGAGAAGAGGATGATAGTATCTTGTTTAAGAAAAAAGTTTCACTTCATTACCCCGACTTTACAGCTTGGGAGGCTGAGCTTATGGCATTGAAGCTAGGACTAACCAAAGCCGTGAGTTTTCGGATCAATCATATCTCAATGTTCTTTGATAATCCTGAGATTTTTGAATTGGTCATGGGGAGATCTGTGCCTAAGGATAAGAAAATCGCCTTGATAATGGATGAGGTGCAACGCATAAGACAACAATTTTCATCTAGCATCCCTTTTCTTGTGGCTAGTAATGAAATTAAGTTTGTGTATAAACTTGCAAAGGAAACACTAGTTTCTAACATCAGCATACCTAGGCCTCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGAACATGTTTTCCGCTGATTTATGCAGTCATTACTTCTGTGTGGAGTGCATGAAGGAACATATAGAAGTCAGTCTAAACGAGGGAGGTTTACCGAGATGTCCTCATGATGGCTGCACATCAAACCTAACTCTTAGAAGCTGTGACCATCTTTTGACACCTAAACAAAGAGAGATGTGGGAAAAAAGGATCAAAGAGGAGTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCTGGGCTTTGATGTCGAAGACGGAGCTCACTGAATCTACTGAAGAAGATGGAGTTAGGAGATGTTGCTATAAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAACTTGTCGTGCAAGGAACACAAGAGTTCCGGTCGTGAGCCTATTACAACAGTGTGGCGTCAATGTAGAAGTTGCCTACACAAGATAAAACTATCGGAAGAACGCATGCCTGTAACTTGCAGGTGTGGCTATAAGTTTTGCTATGCATGTGGAGCTCAATGGAAGCTTGGAGGTTGTTGCTCTCATCATCTCCAAGAGGTGATGGATTGGGTAGCAATAGTCCTCATTTTTCTTGCTTTCGTAAGTCTTTTAGTTGTTAGTTTTATGCTCATAGTTAAGTACAGCTGATAATGTTTAAGTACTTAGCTAGGGTTGTGGTTGTGTTTGTTCTCCCCGTGACTATTTAG
CDS Sequence
- >AT3G45480.1
ATGGCCCCAAACCCCACTGGAAAACCCTCACCTGACGGTTCAAGTTCTGACTCGTACAACCTTTACTTCAAGGGTTCATTGGCGGGATTTGGGGTTGCAATTTACAGAGAAGAGGATGATAGTATCTTGTTTAAGAAAAAAGTTTCACTTCATTACCCCGACTTTACAGCTTGGGAGGCTGAGCTTATGGCATTGAAGCTAGGACTAACCAAAGCCGTGAGTTTTCGGATCAATCATATCTCAATGTTCTTTGATAATCCTGAGATTTTTGAATTGGTCATGGGGAGATCTGTGCCTAAGGATAAGAAAATCGCCTTGATAATGGATGAGGTGCAACGCATAAGACAACAATTTTCATCTAGCATCCCTTTTCTTGTGGCTAGTAATGAAATTAAGTTTGTGTATAAACTTGCAAAGGAAACACTAGTTTCTAACATCAGCATACCTAGGCCTCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGAACATGTTTTCCGCTGATTTATGCAGTCATTACTTCTGTGTGGAGTGCATGAAGGAACATATAGAAGTCAGTCTAAACGAGGGAGGTTTACCGAGATGTCCTCATGATGGCTGCACATCAAACCTAACTCTTAGAAGCTGTGACCATCTTTTGACACCTAAACAAAGAGAGATGTGGGAAAAAAGGATCAAAGAGGAGTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCTGGGCTTTGATGTCGAAGACGGAGCTCACTGAATCTACTGAAGAAGATGGAGTTAGGAGATGTTGCTATAAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAACTTGTCGTGCAAGGAACACAAGAGTTCCGGTCGTGAGCCTATTACAACAGTGTGGCGTCAATGTAGAAGTTGCCTACACAAGATAAAACTATCGGAAGAACGCATGCCTGTAACTTGCAGGTGTGGCTATAAGTTTTGCTATGCATGTGGAGCTCAATGGAAGCTTGGAGGTTGTTGCTCTCATCATCTCCAAGAGGTGATGGATTGGGTAGCAATAGTCCTCATTTTTCTTGCTTTCGTAAGTCTTTTAGTTGTTAGTTTTATGCTCATAGTTAAGTACAGCTGA
Protein Sequence
- >AT3G45480.1
MAPNPTGKPSPDGSSSDSYNLYFKGSLAGFGVAIYREEDDSILFKKKVSLHYPDFTAWEAELMALKLGLTKAVSFRINHISMFFDNPEIFELVMGRSVPKDKKIALIMDEVQRIRQQFSSSIPFLVASNEIKFVYKLAKETLVSNISIPRPQKKTCGNCFNDGIKGENMFSADLCSHYFCVECMKEHIEVSLNEGGLPRCPHDGCTSNLTLRSCDHLLTPKQREMWEKRIKEESIPVCDRFHCPNPRCWALMSKTELTESTEEDGVRRCCYKCRKHFCINCKVPWHSNLSCKEHKSSGREPITTVWRQCRSCLHKIKLSEERMPVTCRCGYKFCYACGAQWKLGGCCSHHLQEVMDWVAIVLIFLAFVSLLVVSFMLIVKYS