Information report for AT3G45300
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- CS860822 — High levels of 15 seed free amino acids, homomethionine and 3-isovaleroyloxypropyl-glucosinolate; reduced 3-benzoyloxypropyl-glucosinolate.
- CS860823 — High levels of 15 seed free amino acids, homomethionine and 3-isovaleroyloxypropyl-glucosinolate, along with reduced 3-benzoyloxypropyl-glucosinolate.
Functional Keywords
Literature and News
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis. DOI: 10.1104/pp.103.035675 ; PMID: 14764908
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Mutations in Arabidopsis acyl-CoA oxidase genes reveal distinct and overlapping roles in beta-oxidation. DOI: 10.1111/j.1365-313X.2005.02343.x ; PMID: 15743450
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- The critical role of Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase during dark-induced starvation. DOI: 10.1105/tpc.105.035162 ; PMID: 16055629
- Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development. DOI: 10.1104/pp.105.067868 ; PMID: 16377752
- A comparison of the Thlaspi caerulescens and Thlaspi arvense shoot transcriptomes. DOI: 10.1111/j.1469-8137.2006.01662.x ; PMID: 16608451
- The mitochondrial electron transfer flavoprotein complex is essential for survival of Arabidopsis in extended darkness. DOI: 10.1111/j.1365-313X.2006.02826.x ; PMID: 16923016
- Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. DOI: 10.1007/s11103-006-9075-1 ; PMID: 17120136
- IBR3, a novel peroxisomal acyl-CoA dehydrogenase-like protein required for indole-3-butyric acid response. DOI: 10.1007/s11103-007-9134-2 ; PMID: 17277896
- Peroxisomal metabolism of propionic acid and isobutyric acid in plants. DOI: 10.1074/jbc.M701028200 ; PMID: 17580301
- Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance. DOI: 10.1186/1471-2164-8-450 ; PMID: 18053238
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. DOI: 10.1186/1471-2229-8-76 ; PMID: 18616834
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria. DOI: 10.1105/tpc.110.075630 ; PMID: 20501910
- Alteration of mitochondrial protein complexes in relation to metabolic regulation under short-term oxidative stress in Arabidopsis seedlings. DOI: 10.1016/j.phytochem.2010.11.003 ; PMID: 21146842
- Chloroplast 2010: a database for large-scale phenotypic screening of Arabidopsis mutants. DOI: 10.1104/pp.110.170118 ; PMID: 21224340
- The Impact of the Branched-Chain Ketoacid Dehydrogenase Complex on Amino Acid Homeostasis in Arabidopsis. DOI: 10.1104/pp.15.00461 ; PMID: 25986129
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The influence of alternative pathways of respiration that utilize branched-chain amino acids following water shortage in Arabidopsis. DOI: 10.1111/pce.12682 ; PMID: 26616144
- Snf1-RELATED KINASE1-Controlled C/S(1)-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. DOI: 10.1105/tpc.17.00414 ; PMID: 29348240
- Vacuolar Protein Degradation via Autophagy Provides Substrates to Amino Acid Catabolic Pathways as an Adaptive Response to Sugar Starvation in Arabidopsis thaliana. DOI: 10.1093/pcp/pcy005 ; PMID: 29390157
- The function of glutaredoxin GRXS15 is required for lipoyl-dependent dehydrogenases in mitochondria. DOI: 10.1093/plphys/kiab172 ; PMID: 33856472
- The Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase is required during normal seed development and germination. DOI: 10.1111/tpj.15566 ; PMID: 34741366
- The role of the electron-transfer flavoprotein: ubiquinone oxidoreductase following carbohydrate starvation in Arabidopsis cell cultures. DOI: 10.1007/s00299-021-02822-1 ; PMID: 35031834
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis. DOI: 10.1104/pp.103.035675 ; PMID: 14764908
- Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphate interactions within the matrix. DOI: 10.1021/pr060403j ; PMID: 17137349
- Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. DOI: 10.1074/mcp.M700535-MCP200 ; PMID: 18385124
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q0WPE4
- EMBL: AK229130
- AlphaFoldDB: Q0WPE4
- EnsemblPlants: AT3G45300.1
- Gramene: AT3G45300.1
- KEGG: ath:AT3G45300
- Orthologous matrix: CFITNSG
- ExpressionAtlas: AT3G45300
- InterPro: IPR006089, IPR006091, IPR009075
- PANTHER: PTHR43884, PTHR43884:SF12
- SUPFAM: SSF47203, SSF56645
- PROSITE: PS00072, PS00073
- Gene3D: 1.10.540.10, 1.20.140.10, 2.40.110.10
- SWISS-MODEL: Q0WPE4
- Conserved Domain Database: cd01156
Homologs
- Brassica oleracea Bo3g129870
Sequences
cDNA Sequence
- >AT3G45300.1
ATTGCTCATATCTTCTTCTCAATTCCAATTTTGTAATCCTTATCTCAAATTAATTTCTATTTTTATAACTACTTAATCTCAATTAGAAGAAGCCTGCTCTCTAATAACAAAAAAAAAAAGCCGTTTGGGATTTCTTTTACACGAACACATTCTTCCGATCTTTCTTGTTTTTAACTTACCGGTAATAACGAAGATATGCAGAGGTTTTTCTCCGCCAGATCGATTCTCGGTTACGCCGTCAAGACGCGGAGGAGGTCTTTCTCTTCTCGTTCTTCGTCTCTCCTATTCGACGACACTCAGTTACAGTTTAAAGAAAGTGTATCCAAGTTTGCGCAAGATAATATCGCTCCTCATGCAGAAAGAATTGATAAAACTAATTCATTTCCAAAGGATGTAAACTTATGGAAGCTAATGGGTGAGTTTAATCTCCATGGAATCACTGCGCCAGAGGAATATGGAGGGCTAGGTCTTGGTTACTTGTATCATTGTATTGCAATGGAGGAAATCAGTCGGGCCTCGGGTTCAGTTGCTTTGTCTTATGGTGCTCATTCCAACCTTTGCATCAATCAATTGGTGAGGAATGGAACTGCAGCCCAAAAGGAAAAGTATTTGCCAAAGCTTATCAGTGGAGAGCATGTTGGTGCTCTTGCAATGAGTGAACCTAATGCTGGTTCAGATGTTGTTGGCATGAAATGCAAGGCTGAGAAGGTAGATGGTGGTTATATACTAAATGGCAACAAGATGTGGTGCACTAATGGTCCATCTGCTGAAACACTGGTTGTTTACGCGAAAACTGATACAAAAGCAGGTTCCAAAGGAATCACGGCTTTCATCATAGAGAAAGGAATGACCGGATTCAGTACTGCTCAGAAATTGGACAAACTAGGAATGCGGGGAAGCGATACGTGTGAGCTTGTTTTTGAGAATTGCTTCGTTCCAGAGGAAAATATTCTAGACAAGGAAGGAAAAGGAGTGTATGTTCTGATGTCAGGTCTGGATTTGGAGAGACTTGTTTTAGCAGCTGGGCCCTTAGGGATCATGCAGGCATGCCTCGACAATGTTCTTCCCTATATTCGCCAGAGAGAACAATTTGGTCGTCCAGTTGGGGAATTTCAGTTTATACAGGGTAAAGTTGCTGATATGTACACTGCATTACAATCTTCAAGGTCATACGTTTACTCTGTTGCGAGGGACTGTGACAATGGGAAAGTTGACCCAAAGGACTGCGCCGGAACTATTCTTTGTGCGGCCGAGAGAGCAACGCAGGTCGCTTTACAGGCGATACAATGTTTAGGCGGAAATGGATACATAAACGAATATGCAACAGGACGCCTTCTAAGAGATGCAAAGCTATATGAAATCGGTGCAGGGACAAGCGAGATCAGAAGGATTGTCATCGGTCGCGAGCTTTTCAAAGAAGAATAGAGATAAGTCTGTTTTCTGCATTGCCAATGCGACATTTTCATTCTGTACACGTATATATAATTCACAGTGTCCTTAATAACCTCACAATAAGAAAAATAGCTTCAAGCAATCCTCTAGAAACCATATCAATTATTAGTCACATTATGTGTGACATGTTATCACGATACCAGCATGCCAATCTAACACTGACACTTCTGGTTAAACTTA
CDS Sequence
- >AT3G45300.1
ATGCAGAGGTTTTTCTCCGCCAGATCGATTCTCGGTTACGCCGTCAAGACGCGGAGGAGGTCTTTCTCTTCTCGTTCTTCGTCTCTCCTATTCGACGACACTCAGTTACAGTTTAAAGAAAGTGTATCCAAGTTTGCGCAAGATAATATCGCTCCTCATGCAGAAAGAATTGATAAAACTAATTCATTTCCAAAGGATGTAAACTTATGGAAGCTAATGGGTGAGTTTAATCTCCATGGAATCACTGCGCCAGAGGAATATGGAGGGCTAGGTCTTGGTTACTTGTATCATTGTATTGCAATGGAGGAAATCAGTCGGGCCTCGGGTTCAGTTGCTTTGTCTTATGGTGCTCATTCCAACCTTTGCATCAATCAATTGGTGAGGAATGGAACTGCAGCCCAAAAGGAAAAGTATTTGCCAAAGCTTATCAGTGGAGAGCATGTTGGTGCTCTTGCAATGAGTGAACCTAATGCTGGTTCAGATGTTGTTGGCATGAAATGCAAGGCTGAGAAGGTAGATGGTGGTTATATACTAAATGGCAACAAGATGTGGTGCACTAATGGTCCATCTGCTGAAACACTGGTTGTTTACGCGAAAACTGATACAAAAGCAGGTTCCAAAGGAATCACGGCTTTCATCATAGAGAAAGGAATGACCGGATTCAGTACTGCTCAGAAATTGGACAAACTAGGAATGCGGGGAAGCGATACGTGTGAGCTTGTTTTTGAGAATTGCTTCGTTCCAGAGGAAAATATTCTAGACAAGGAAGGAAAAGGAGTGTATGTTCTGATGTCAGGTCTGGATTTGGAGAGACTTGTTTTAGCAGCTGGGCCCTTAGGGATCATGCAGGCATGCCTCGACAATGTTCTTCCCTATATTCGCCAGAGAGAACAATTTGGTCGTCCAGTTGGGGAATTTCAGTTTATACAGGGTAAAGTTGCTGATATGTACACTGCATTACAATCTTCAAGGTCATACGTTTACTCTGTTGCGAGGGACTGTGACAATGGGAAAGTTGACCCAAAGGACTGCGCCGGAACTATTCTTTGTGCGGCCGAGAGAGCAACGCAGGTCGCTTTACAGGCGATACAATGTTTAGGCGGAAATGGATACATAAACGAATATGCAACAGGACGCCTTCTAAGAGATGCAAAGCTATATGAAATCGGTGCAGGGACAAGCGAGATCAGAAGGATTGTCATCGGTCGCGAGCTTTTCAAAGAAGAATAG
Protein Sequence
- >AT3G45300.1
MQRFFSARSILGYAVKTRRRSFSSRSSSLLFDDTQLQFKESVSKFAQDNIAPHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVIGRELFKEE