Information report for AT3G44890
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Characterization of rps17, rp19 and rpl15: three nucleus-encoded plastid ribosomal protein genes. DOI: 10.1007/BF00019207 ; PMID: 1581570
- Gene expression phenotypes of Arabidopsis associated with sensitivity to low temperatures. DOI: 10.1104/pp.103.021261 ; PMID: 12805619
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Generation of Arabidopsis protein chips for antibody and serum screening. DOI: 10.1023/a:1025424814739 ; PMID: 14558660
- Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins. DOI: 10.1093/molbev/msj080 ; PMID: 16368778
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Dosage Sensitivity of RPL9 and Concerted Evolution of Ribosomal Protein Genes in Plants. DOI: 10.3389/fpls.2015.01102 ; PMID: 26734020
- CHLOROPLAST RIBOSOME ASSOCIATED Supports Translation under Stress and Interacts with the Ribosomal 30S Subunit. DOI: 10.1104/pp.18.00602 ; PMID: 29914890
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
Gene Resources
- UniProt: A0A178VBQ7
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VBQ7
- EnsemblPlants: AT3G44890.1
- Gramene: AT3G44890.1
- KEGG: ath:AT3G44890
- Orthologous matrix: FAIRWTK
- ExpressionAtlas: AT3G44890
- InterPro: IPR000244, IPR009027, IPR020069
- PANTHER: PTHR21368
- SUPFAM: SSF55653, SSF55658
- PROSITE: PS00651
- Gene3D: 3.10.430.100, 3.40.5.10
- OrthoDB: A0A178VBQ7
- SWISS-MODEL: A0A178VBQ7
Sequences
cDNA Sequence
- >AT3G44890.1
ACATTCGTCACTTCACTTGAGCAAGCACACGAAAAGCCGATAAGAAGATAACAATTACTACAACTGTGCGCTCTTGTTATCTCTGCTTTGAAGTGAAATCAGCTTTGGCTATGGCTTCTTCGACAGCTTTGTCTCTCTCATGGAGCTCCTCTCCTTGTTGGTCACACAGCTTCAATGGCGGTGCAAATGAAACCCTAAAAGTATCTGAGCGAAGGTTCAATTTTGAAGTTGTTTCCCAGAAGAAAGCTAAGAAACTTCGCAAGGTAATTTTGAAAGAGGATGTGACGGATTTGGGTAAGCAAGGGCAATTACTTGATGTGAAAGCTGGATTTTTCAGAAACTTCCTCTTGCCTACTGGAAAGGCTCAGCTTATGACTCCACTTCTGCTCAAGGAATTGAAGATGGAAGACGAACGGATTGAGGCAGAGAAGCAAAGGGTGAAAGAAGAGGCACAACAACTGGCGATGGTATTCCAAACCGTTGGTGCTTTCAAGGTTAAACGCAAAGGCGGTAAAGGCAAACTGATATTTGGATCTGTCACAGCTCAAGACCTCGTCGACATCATCAAATCACAGCTCCAAAAGGACATCGACAAACGCCTTGTCTCTCTCCCAGAAATCCGTGAAACCGGAGAATACATAGCCGAACTCAAGCTTCACCCCGATGTCACTGCTCGAGTTAAGATCAATGTTTTCGCTAACTAAACCTTCAACGATTCAAGACTCCTACTGCATCCCAAGGAACGTATAGAGAGGGAAAAGAGAGTAGCCTCTTGTGGTGAGGATTGAAGGTTGTGAAGTTTTTCCTTTAGATTGTTTGATGCATTTGTATTTTTGCTATTTTTGGAATCTGGAAACGCTAAAAGTATAATATTCTCTTGCAAGTTATGATATTTACTTGAAGTTATATTGTATTCATTTGTCTGTTGAAGTGATGAGAATGCTTAAATTAACACTAACAAGCTGTTTAAAAAACTAACAAATAACCAGAAATCTGAAAAACTATGTCGCCGTCTCTTGTTCCCACAAGATTGACTATTTTTAGAGAGTTGTTGTTTAATGACAAAACCCAGATGTTTTTTTGTTTCACTGCTTCTCTTCAATTCTGTTACCAAAACCTTTTTTGTTTAAGACAGTTATAGCTCTTGATTCGGTTTTTATAATCATATGATTCTCTTGTTTCTATCATCTTTGTTCTTGTTAACAAGTTTTGTCCA
CDS Sequence
- >AT3G44890.1
ATGGCTTCTTCGACAGCTTTGTCTCTCTCATGGAGCTCCTCTCCTTGTTGGTCACACAGCTTCAATGGCGGTGCAAATGAAACCCTAAAAGTATCTGAGCGAAGGTTCAATTTTGAAGTTGTTTCCCAGAAGAAAGCTAAGAAACTTCGCAAGGTAATTTTGAAAGAGGATGTGACGGATTTGGGTAAGCAAGGGCAATTACTTGATGTGAAAGCTGGATTTTTCAGAAACTTCCTCTTGCCTACTGGAAAGGCTCAGCTTATGACTCCACTTCTGCTCAAGGAATTGAAGATGGAAGACGAACGGATTGAGGCAGAGAAGCAAAGGGTGAAAGAAGAGGCACAACAACTGGCGATGGTATTCCAAACCGTTGGTGCTTTCAAGGTTAAACGCAAAGGCGGTAAAGGCAAACTGATATTTGGATCTGTCACAGCTCAAGACCTCGTCGACATCATCAAATCACAGCTCCAAAAGGACATCGACAAACGCCTTGTCTCTCTCCCAGAAATCCGTGAAACCGGAGAATACATAGCCGAACTCAAGCTTCACCCCGATGTCACTGCTCGAGTTAAGATCAATGTTTTCGCTAACTAA
Protein Sequence
- >AT3G44890.1
MASSTALSLSWSSSPCWSHSFNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIAELKLHPDVTARVKINVFAN