Gene Details:
- Gene ID: AT3G44600
- Gene Symbol: AtCYP71, CYP71
- Gene Name: cyclophilin 71
- Description: cyclophilin71;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000017 — vascular leaf primordium — leaf primordium (exact), portion of vascular leaf primordium tissue (exact), primordio de hoja (Spanish, exact), vascular leaf primordia (exact, plural), 葉原基 (Japanese, exact)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0020147 — root apical meristem — RAM (exact), meristema apical de la raíz (Spanish, exact), 根端分裂組織 (Japanese, exact), promeristem (broad)
- PO:0020148 — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , vascular leaf primordium , stamen , sepal , petal , cotyledon , root apical meristem , shoot apical meristem , guard cell
Literature:
- The Arabidopsis cyclophilin gene family. DOI: 10.1104/pp.103.022160 ; PMID: 15051864
- Immunophilins and parvulins. Superfamily of peptidyl prolyl isomerases in Arabidopsis. DOI: 10.1104/pp.103.031005 ; PMID: 15047905
- The mitochondrial type II peroxiredoxin F is essential for redox homeostasis and root growth of Arabidopsis thaliana under stress. DOI: 10.1074/jbc.M413189200 ; PMID: 15632145
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The cyclophilin AtCYP71 interacts with CAF-1 and LHP1 and functions in multiple chromatin remodeling processes. DOI: 10.1093/mp/ssr036 ; PMID: 21596687
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Structural and functional analyses of the PPIase domain of Arabidopsis thaliana CYP71 reveal its catalytic activity toward histone H3. DOI: 10.1002/1873-3468.13965 ; PMID: 33098102
- Overexpression of the PanaxginsengCYP703 Alters Cutin Composition of Reproductive Tissues in Arabidopsis. DOI: 10.3390/plants11030383 ; PMID: 35161364
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
Sequences:
cDNA Sequence
- >AT3G44600.1
CTATTTATTTCACTCACTGTCTCTCTCTGACAATTCGAAGTTGTAGCAAACCTTGCTTTCAATCGACGAAGGAGTTTTGAGTTGAGGAAGTGAGTAGAAATCAATGGAGGAAGAATCTAAGAATGGCGGAACCACGATTCCGACTGAAGAATTGGCGGTGGTTGCGGTGCCACCTGTAGTAGAAGAAGAGGAGCCGATGGTCGGACCTGGACCAGCTCCACGAGGCAAACGCAAGCGTCCGCTTCAATTCGAGCAAGCTTATCTTGATTCGCTTCCTTCTGCTAATATGTATGAGAAAAGTTATATGCATCGAGATGTAGTTACACATGTTGCTGTTTCAGCAGCTGAGTTCTTTATAAGTGGAAGTATGGATGGTCACTTGAAATTTTGGAAGAAAAAGGGTGTTGGTATCGAGTTTGCTAAGCATTTCCGCTCCCATCTCGGTCCAATTGAAGGTCTAGCGGTTAGCATTGATGGTTTGCTTTGCTGTACAATCTCAAATGATCATGCTGTTAAAATATATGATGTTGTCAACTACGATATGATGGCCATGATCCGTTTGCCATATATTCCTGGTGCTGTTGAGTGGGTCTACAAGCAAGGGGATGTCAAAGCTAAACTTGCTGTCAGTGACCGAGACTCTTTGTTTGTGCACATTTATGATCCTCGTTCTGGTTCCAACGAACCCATTGCTTCAAAAGAGATACATATGAATCCAATTAAGGTCATGAAGTACAATCCTGTTTCGGACACAATGATCTCTGGTGACACAAAAGGAATCATTGAGTACTGGAGTGCAACTACATTACAGTTTCCCGAGGATGAGGTAAACTTTAAACTGAAGAGTGATACAAATCTCTTTGAGATTATAAAGTGCAAAACAACAATCTCTGCCATTGAGGTGAGTCCAGATGGTAAACAGTTTTCCATTACAGCTCCTGATCGTAGGATTCGTGTGTTCTGGTTTAGAACTGGTAAACTGAGGCGGGTATATGATGAGTCACTTGTGGTGGCCCAAGATCTGCAGAGGAGTGATGCTCCCTTATACAGGCTTGAAGCTATTGACTTTGGTAGAAGAATGGCAGTTGAAAAGGAACTTGAAAAAACCGAGAGTGCTCCGCAGCCCAATGCTGTGTTTGATGAAAGCTCTAATTTCCTTATATACGCCACTTTTCTTGGAATAAAAGTAATAAATTTACACACCAACACAGTTGCAAGGATCCTTGGAAAGGTGGAGAGTAATGAAAGGTATCTGAGAGTTGCATTATATCAAGGTGATCAAGGAGGCAAGAAAGTTAGAAAGATTCCTGCAGCTGCAGCAAATGTAAATGAAAGCAAGGAGCCTTTGACTGATCCGACTATCCTATGCTGTGCCTTTAAGAAACACAGGATCTATATGTTCAGTCGGAGAGAGCCAGAAGAACCTGAAGATGCAAGCCAAGGGAGAGATGTGTTTAACGAGAAGCCTGCTGCTGATGAACTTATGTCTGTCTCAGATATTGGAAACTCAGCCACAACATCCCTTCCAGAGAACGTGATAATGCATACTACGCTTGGTGACATTCACATGAAGCTTTACCCAGAAGAATGTCCCAAAACTGTGGAGAATTTCACAACACACTGTAGAAATGGCTATTACGATAACCACCTTTTCCATCGGGTTATCAGAGGATTTATGATACAGACTGGAGATCCTCTTGGGGATGGTACTGGAGGACAGTCAATTTGGGGCAGAGAATTTGAGGACGAGTTTCACAAAAGTCTAAGGCATGACAGGCCGTTCACATTGTCTATGGCAAATGCCGGCCCAAACACAAATGGGTCTCAGTTCTTCATCACAACAGTGGCTACACCGTGGCTAGACAATAAGCACACTGTTTTTGGAAGAGTTGTGAAGGGAATGGACGTCGTTCAGGGTATAGAGAAAGTGAAGACAGACAAGAACGACAGGCCTTACCAAGATGTGAAGATACTTAATGTCACCGTTCCGAAATCTTAGCATCTTTGCTACTGTCTCAAAGATAGTGAACAATCTATGCTGATCCGTAACCCCGTGATTGGTTCTATGCTGGGAAGTTGTTCTTGCGGAGATGGATCGAACTGTGGGATATGTTTGTTGTACCCGAGCAGATCAGGTTAAGTTGGTGGCATCATCTTCTTGACACTAAACATTATTTTATGTTTTTGTCAAACAAATTTTATGAGAATGCTTAGTGAACAAAAAGACTTCAACTTCTAATGTTACTTCAATTCCTCTTATTTTCTTGAAATAGAGTTGATCTACTTTCTTCTAATTTATCCAAGCTTCATGGGTTTATGTCTGAAACGACAACACGACAACACCAATGTTTGAAGTTAATAACATAGAATCTCAATTTCACTTGGATTTGGATTTTTCTGTTTATTTGGGATCACTAAAGATAAACTTTTCC
CDS Sequence
- >AT3G44600.1
ATGGAGGAAGAATCTAAGAATGGCGGAACCACGATTCCGACTGAAGAATTGGCGGTGGTTGCGGTGCCACCTGTAGTAGAAGAAGAGGAGCCGATGGTCGGACCTGGACCAGCTCCACGAGGCAAACGCAAGCGTCCGCTTCAATTCGAGCAAGCTTATCTTGATTCGCTTCCTTCTGCTAATATGTATGAGAAAAGTTATATGCATCGAGATGTAGTTACACATGTTGCTGTTTCAGCAGCTGAGTTCTTTATAAGTGGAAGTATGGATGGTCACTTGAAATTTTGGAAGAAAAAGGGTGTTGGTATCGAGTTTGCTAAGCATTTCCGCTCCCATCTCGGTCCAATTGAAGGTCTAGCGGTTAGCATTGATGGTTTGCTTTGCTGTACAATCTCAAATGATCATGCTGTTAAAATATATGATGTTGTCAACTACGATATGATGGCCATGATCCGTTTGCCATATATTCCTGGTGCTGTTGAGTGGGTCTACAAGCAAGGGGATGTCAAAGCTAAACTTGCTGTCAGTGACCGAGACTCTTTGTTTGTGCACATTTATGATCCTCGTTCTGGTTCCAACGAACCCATTGCTTCAAAAGAGATACATATGAATCCAATTAAGGTCATGAAGTACAATCCTGTTTCGGACACAATGATCTCTGGTGACACAAAAGGAATCATTGAGTACTGGAGTGCAACTACATTACAGTTTCCCGAGGATGAGGTAAACTTTAAACTGAAGAGTGATACAAATCTCTTTGAGATTATAAAGTGCAAAACAACAATCTCTGCCATTGAGGTGAGTCCAGATGGTAAACAGTTTTCCATTACAGCTCCTGATCGTAGGATTCGTGTGTTCTGGTTTAGAACTGGTAAACTGAGGCGGGTATATGATGAGTCACTTGTGGTGGCCCAAGATCTGCAGAGGAGTGATGCTCCCTTATACAGGCTTGAAGCTATTGACTTTGGTAGAAGAATGGCAGTTGAAAAGGAACTTGAAAAAACCGAGAGTGCTCCGCAGCCCAATGCTGTGTTTGATGAAAGCTCTAATTTCCTTATATACGCCACTTTTCTTGGAATAAAAGTAATAAATTTACACACCAACACAGTTGCAAGGATCCTTGGAAAGGTGGAGAGTAATGAAAGGTATCTGAGAGTTGCATTATATCAAGGTGATCAAGGAGGCAAGAAAGTTAGAAAGATTCCTGCAGCTGCAGCAAATGTAAATGAAAGCAAGGAGCCTTTGACTGATCCGACTATCCTATGCTGTGCCTTTAAGAAACACAGGATCTATATGTTCAGTCGGAGAGAGCCAGAAGAACCTGAAGATGCAAGCCAAGGGAGAGATGTGTTTAACGAGAAGCCTGCTGCTGATGAACTTATGTCTGTCTCAGATATTGGAAACTCAGCCACAACATCCCTTCCAGAGAACGTGATAATGCATACTACGCTTGGTGACATTCACATGAAGCTTTACCCAGAAGAATGTCCCAAAACTGTGGAGAATTTCACAACACACTGTAGAAATGGCTATTACGATAACCACCTTTTCCATCGGGTTATCAGAGGATTTATGATACAGACTGGAGATCCTCTTGGGGATGGTACTGGAGGACAGTCAATTTGGGGCAGAGAATTTGAGGACGAGTTTCACAAAAGTCTAAGGCATGACAGGCCGTTCACATTGTCTATGGCAAATGCCGGCCCAAACACAAATGGGTCTCAGTTCTTCATCACAACAGTGGCTACACCGTGGCTAGACAATAAGCACACTGTTTTTGGAAGAGTTGTGAAGGGAATGGACGTCGTTCAGGGTATAGAGAAAGTGAAGACAGACAAGAACGACAGGCCTTACCAAGATGTGAAGATACTTAATGTCACCGTTCCGAAATCTTAG
Protein Sequence
- >AT3G44600.1
MEEESKNGGTTIPTEELAVVAVPPVVEEEEPMVGPGPAPRGKRKRPLQFEQAYLDSLPSANMYEKSYMHRDVVTHVAVSAAEFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDVVNYDMMAMIRLPYIPGAVEWVYKQGDVKAKLAVSDRDSLFVHIYDPRSGSNEPIASKEIHMNPIKVMKYNPVSDTMISGDTKGIIEYWSATTLQFPEDEVNFKLKSDTNLFEIIKCKTTISAIEVSPDGKQFSITAPDRRIRVFWFRTGKLRRVYDESLVVAQDLQRSDAPLYRLEAIDFGRRMAVEKELEKTESAPQPNAVFDESSNFLIYATFLGIKVINLHTNTVARILGKVESNERYLRVALYQGDQGGKKVRKIPAAAANVNESKEPLTDPTILCCAFKKHRIYMFSRREPEEPEDASQGRDVFNEKPAADELMSVSDIGNSATTSLPENVIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKNDRPYQDVKILNVTVPKS