Information report for AT3G44590
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The composition and turnover of the Arabidopsis thaliana 80S cytosolic ribosome. DOI: 10.1042/BCJ20200385 ; PMID: 32744327
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: Q0WRF9
- EMBL: AK228350
- AlphaFoldDB: Q0WRF9
- EnsemblPlants: AT3G44590.1, AT3G44590.2
- Gramene: AT3G44590.1, AT3G44590.2
- KEGG: ath:AT3G44590
- Orthologous matrix: ICKAVHI
- ExpressionAtlas: AT3G44590
- InterPro: IPR027534, IPR038716, IPR044076
- PANTHER: PTHR21141, PTHR21141:SF115
- Gene3D: 1.10.10.1410
- SWISS-MODEL: Q0WRF9
- Conserved Domain Database: cd05833
Sequences
cDNA Sequence
- >AT3G44590.2
AAAGCTTGTAGCTTCCTGCTCCTCAAATCTTCTTGCAGAAAAATGAAGGTTGCCGCTGCTTTCCTCCTCGCCGTTTTGGGCGGAAACGCTAATCCTTCTGCTGATAATATCAAAGATATCATCGGAGCTGTTGGTGCTGATGTTGATGGAGAGAGCATTGAGCTTCTATTGAAAGAAGTGAGTGGTAAAGACATTGCTGAGCTGATTGCTTCTGGTAGGGAGAAGTTAGCGTCTGTGCCATCTGGTGGTGGTGTGGCTGTTTCAGCTGCTCCATCAAGCGGTGGTGGTGGTGCTGCTGCCCCTGCGGAGAAGAAAGAAGCCAAGAAGGAAGAGAAAGAAGAGTCTGATGATGACATGGGATTCAGTCTCTTCGAGTAAGGTTTTTGTCCCCACGGAAAGGAGTCGAGATTTGATTTTTTGTTCTCTTAGTGGTTCTGGTTTTTGCTTCTTGGATTACGAATTTTACTCCTTAGATAATGAAGCAAGAAGAGTTTTTTCAACTATGTTGCGACCTTGCGGGTTATTCATTTATCGTTTTCCGTTTGATTTACATGTTGAATCTGGTCTAAGCTTGTAATTTACATAGTTTAGTTCATAGTATGTTAGCATATCACAAAATAAGTGCCTAAGAGGGCTAGAATTTGATACACT - >AT3G44590.1
AAAGCTTGTAGCTTCCTGCTCCTCAAATCTTCTTGCAGAAAAATGAAGGTTGCCGCTGCTTTCCTCCTCGCCGTTTTGGGCGGAAACGCTAATCCTTCTGCTGATAATATCAAAGATATCATCGGAGCTGTTGGTGCTGATGTTGATGGAGAGAGCATTGAGCTTCTATTGAAAGAAGTGAGTGGTAAAGACATTGCTGAGCTGATTGCTTCTGGTAGGGAGAAGTTAGCGTCTGTGCCATCTGGTGGTGGTGTGGCTGTTTCAGCTGCTCCATCAAGCGGTGGTGGTGGTGCTGCTGCCCCTGCGGAGAAGAAAGAAGCCAAGAAGGAAGAGAAAGAAGAGTCTGATGATGACATGGGATTCAGTCTCTTCGAGTAAGGTTTTTGTCCCCACGGAAAGGAGTCGAGATTTGATTTTTTGTTCTCTTAGTGGTTCTGGTTTTTGCTTCTTGGATTACGAATTTTACTCCTTAGATAATGAAGCAAGAAGAGTTTTTTCAACTATGTTGCGACCTTGCGGGTTATTCATTTATCGTTTTCCGTTTGATTTACATGTTGAATCTGGTCTAAGCTTGTAATTTACATAGTTTAGTTCATAGTATGTTAGCATATCACAAAATAAGTGCCTAAGAGGGCTAGAATTTGATACACT
CDS Sequence
- >AT3G44590.2
ATGAAGGTTGCCGCTGCTTTCCTCCTCGCCGTTTTGGGCGGAAACGCTAATCCTTCTGCTGATAATATCAAAGATATCATCGGAGCTGTTGGTGCTGATGTTGATGGAGAGAGCATTGAGCTTCTATTGAAAGAAGTGAGTGGTAAAGACATTGCTGAGCTGATTGCTTCTGGTAGGGAGAAGTTAGCGTCTGTGCCATCTGGTGGTGGTGTGGCTGTTTCAGCTGCTCCATCAAGCGGTGGTGGTGGTGCTGCTGCCCCTGCGGAGAAGAAAGAAGCCAAGAAGGAAGAGAAAGAAGAGTCTGATGATGACATGGGATTCAGTCTCTTCGAGTAA - >AT3G44590.1
ATGAAGGTTGCCGCTGCTTTCCTCCTCGCCGTTTTGGGCGGAAACGCTAATCCTTCTGCTGATAATATCAAAGATATCATCGGAGCTGTTGGTGCTGATGTTGATGGAGAGAGCATTGAGCTTCTATTGAAAGAAGTGAGTGGTAAAGACATTGCTGAGCTGATTGCTTCTGGTAGGGAGAAGTTAGCGTCTGTGCCATCTGGTGGTGGTGTGGCTGTTTCAGCTGCTCCATCAAGCGGTGGTGGTGGTGCTGCTGCCCCTGCGGAGAAGAAAGAAGCCAAGAAGGAAGAGAAAGAAGAGTCTGATGATGACATGGGATTCAGTCTCTTCGAGTAA
Protein Sequence
- >AT3G44590.2
MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE - >AT3G44590.1
MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE