Gene Details:
- Gene ID: AT3G44450
- Gene Symbol: BIC2
- Gene Name: Blue-light Inhibitor of Cryptochromes 2
- Description: hypothetical protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS71577 — Hypersensitive to blue light; short hypocotyls in blue light.
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- A UV-B-specific signaling component orchestrates plant UV protection. DOI: 10.1073/pnas.0507187102 ; PMID: 16330762
- Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. DOI: 10.1104/pp.107.098293 ; PMID: 17478635
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Photoactivation and inactivation of Arabidopsis cryptochrome 2. DOI: 10.1126/science.aaf9030 ; PMID: 27846570
- A CRY-BIC negative-feedback circuitry regulating blue light sensitivity of Arabidopsis. DOI: 10.1111/tpj.13664 ; PMID: 28833729
- Structural insights into BIC-mediated inactivation of Arabidopsis cryptochrome 2. DOI: 10.1038/s41594-020-0410-z ; PMID: 32398826
- BIC2, a Cryptochrome Function Inhibitor, Is Involved in the Regulation of ABA Responses in Arabidopsis. DOI: 10.3390/plants12112220 ; PMID: 37299199
Sequences:
cDNA Sequence
- >AT3G44450.1
GTATAACATTTATGCATGTTCTACAAAGCGGTTTAAGCGGTCATCTATACTTCGACTAGACGTTAGATGCTCATGCCGGGTCTAGATAACCGGTGAAGGAAAAACCAAACATGCCATGAGACGTAGAAACGTCAACGACCATATAATGGTATTACTATTATATGTGATCCTACAAGAAGACACGGCCACCACAAATCTCTGTCACACTCTCCTTCGTTTTCAACCTTGTATATTATTTTTCTTCTTTCTATTATTTCTCTCTAAATCTCAACATTTTTATATATACAACACACACGTCGAAGCCAATAAAAATCTCTACTACAAAAGTAAAAATAAAGAAAAGAGTTCAAAATGAAGAACACCAATTTGCCTGAAGAAACCAAGGAACCAATCTCTCCAGGATCTTCTCACCGGAAACAAAACAAGACAGGTACAAAGACATGTTTCCCGGAAACAACGGTGTTGTCAGGACGTGATAGGCTAAAGAGACATAGAGAAGAGGTTGCCGGAAAAGTTCCTATACCGGATAGTTGGGGAAAAGAAGGATTGCTTATGGGATGGATGGATTTTTCGACCTTCGACGCTGCTTTTACGTCTAGCCAGATTGTCTCTGCTCGAGCTGCGTTAATGGCTGACTCAGGAGACGATGCCGGAGCTAGAGGAAGTAGGCCTCAACGCCTTCGAGTTGAGAGTTCTTGTTGATTTCATTGTCTTAGAGAAATGTTTATGAAATAATACTCTCATCATGATTTTGAATGTTATTATTAGATACCTTATCTTCACATTGATTTTGAAATTTTGAACCATTGATACAATTATTCAAAGTTTCATATAGTACTTGTCTAATTGAATTGATTTGTAAATGGAATTTGCATGTGCGTGAGACAATTTGGCCATTATATAGTTGGGATGAGTAATTTATTTTCTGTTGAAAATTGAGAGATATTGATTAAGAATTGTATAGTGAAGTGAAGGATTCATGCTTTTCTGATAACATGCAAGTCAGATTTTTTTATTTTTTTTTCATACTTTTTTTTTGTTTTCCTATCATGACATTTTGGCTCACTTTTTCTTTTCTTTTTTTTGGTGATCAACTTTAGATTTTGAATTTTCAGGGTTATTATCAAACTCTCTATTATTATGATTATTTAATGACCATTTTCAA
CDS Sequence
- >AT3G44450.1
ATGAAGAACACCAATTTGCCTGAAGAAACCAAGGAACCAATCTCTCCAGGATCTTCTCACCGGAAACAAAACAAGACAGGTACAAAGACATGTTTCCCGGAAACAACGGTGTTGTCAGGACGTGATAGGCTAAAGAGACATAGAGAAGAGGTTGCCGGAAAAGTTCCTATACCGGATAGTTGGGGAAAAGAAGGATTGCTTATGGGATGGATGGATTTTTCGACCTTCGACGCTGCTTTTACGTCTAGCCAGATTGTCTCTGCTCGAGCTGCGTTAATGGCTGACTCAGGAGACGATGCCGGAGCTAGAGGAAGTAGGCCTCAACGCCTTCGAGTTGAGAGTTCTTGTTGA
Protein Sequence
- >AT3G44450.1
MKNTNLPEETKEPISPGSSHRKQNKTGTKTCFPETTVLSGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMADSGDDAGARGSRPQRLRVESSC