Information report for AT3G44320
Gene Details
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Functional Descriptions
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- trichome , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature and News
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- SAGE analysis of transcriptome responses in Arabidopsis roots exposed to 2,4,6-trinitrotoluene. DOI: 10.1104/pp.103.028019 ; PMID: 14551330
- Brassinosteroids promote root growth in Arabidopsis. DOI: 10.1104/pp.103.028662 ; PMID: 14526105
- Selective and powerful stress gene expression in Arabidopsis in response to malondialdehyde. DOI: 10.1111/j.1365-313x.2003.02013.x ; PMID: 14996219
- Camalexin is synthesized from indole-3-acetaldoxime, a key branching point between primary and secondary metabolism in Arabidopsis. DOI: 10.1073/pnas.0305876101 ; PMID: 15148388
- Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification. DOI: 10.1016/j.phytochem.2004.03.026 ; PMID: 15276459
- A conserved transcript pattern in response to a specialist and a generalist herbivore. DOI: 10.1105/tpc.104.026120 ; PMID: 15494554
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02488.x ; PMID: 16115070
- At5PTase13 modulates cotyledon vein development through regulating auxin homeostasis. DOI: 10.1104/pp.105.067140 ; PMID: 16299182
- Dynamics of Arabidopsis thaliana soluble proteome in response to different nutrient culture conditions. DOI: 10.1002/elps.200500561 ; PMID: 16358359
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- WRKY70 modulates the selection of signaling pathways in plant defense. DOI: 10.1111/j.1365-313X.2006.02712.x ; PMID: 16623907
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Resistance to Botrytis cinerea induced in Arabidopsis by elicitors is independent of salicylic acid, ethylene, or jasmonate signaling but requires PHYTOALEXIN DEFICIENT3. DOI: 10.1104/pp.107.095596 ; PMID: 17384165
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Arabidopsis thaliana plants acclimated to low dose rates of ultraviolet B radiation show specific changes in morphology and gene expression in the absence of stress symptoms. DOI: 10.1111/j.1469-8137.2007.02092.x ; PMID: 17587374
- Transcription factors relevant to auxin signalling coordinate broad-spectrum metabolic shifts including sulphur metabolism. DOI: 10.1093/jxb/ern144 ; PMID: 18596113
- A proteomic strategy for global analysis of plant protein complexes. DOI: 10.1105/tpc.114.127563 ; PMID: 25293756
- Proteomics and functional analyses of Arabidopsis nitrilases involved in the defense response to microbial pathogens. DOI: 10.1007/s00425-016-2525-3 ; PMID: 27095107
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Nitrilases NIT1/2/3 Positively Regulate Flowering by Inhibiting MAF4 Expression in Arabidopsis. DOI: 10.3389/fpls.2022.889460 ; PMID: 35665187
- Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification. DOI: 10.1016/j.phytochem.2004.03.026 ; PMID: 15276459
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VEJ6
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VEJ6
- EnsemblPlants: AT3G44320.1
- Gramene: AT3G44320.1
- KEGG: ath:AT3G44320
- Orthologous matrix: FPEHPDY
- ExpressionAtlas: AT3G44320
- InterPro: IPR000132, IPR003010, IPR036526
- PANTHER: PTHR46044, PTHR46044:SF11
- SUPFAM: SSF56317
- PROSITE: PS00920, PS00921, PS50263
- Gene3D: 3.60.110.10
- SWISS-MODEL: A0A178VEJ6
- Conserved Domain Database: cd07564
Homologs
- Gossypium arboreum Cotton_A_37650_BGI-A2_v1.0
- Gossypium hirsutum Gh_D04G0925, Gh_A04G0489
- Juglans regia WALNUT_00024380-RA
- Manihot esculenta Manes.09G051000.1.p
- Oryza sativa OsNIT1, OsNIT2
- Populus trichocarpa Potri.006G207700.1, Potri.016G074200.1
- Prunus mume XP_008243489.1, XP_008243490.1
- Prunus persica Prupe.7G100200.1.p
- Ricinus communis 30032.m000457
- Ziziphus jujuba XP_015878771.1
Sequences
cDNA Sequence
- >AT3G44320.1
GAACACGTGAACGCGTGATCCACCACCGGTTCGTTCTGCAATACCGTCTCAAGTATAAAACTAAAAATTGATCGACAAAAAAAAAAAGACTATATATAATGCCTCCCAAGTCTCTTCAGTGTCATCAAAGTATAAAGTAAAAACAAAGACTCGAGTTAATATGTCTAGTACTGAAGAAATGTCATCAGTCAAAAACACAACTCAGGTTATTGGCGTTGACCCATCCTCCACCGTACGAGTTACCATCGTTCAATCTTCCACCGTCTATAATGATACCCCGGCCACTTTAGACAAGGCGGAGAAGTTTATTGTGGAGGCGGCGAGCAAAGGAGCGAAGTTGGTGTTGTTTCCCGAGGCGTTCATCGGCGGTTATCCTCGAGGTTTTAGGTTTGGTTTAGCGGTGGGAGTTCATAACGAAGAAGGGCGTGATGAGTTTCGTAACTACCATGCTTCTGCTATTAAAGTCCCTGGCCCTGAAGTGGAAAGATTGGCTGAGTTGGCCGGGAAAAATAATGTGCACTTGGTAATGGGGGCTATAGAGAAGGATGGTTATACACTCTATTGCACAGCTCTTTTCTTCAGTCCACAAGGTCAGTTTTTAGGTAAGCACCGTAAAGTCATGCCCACATCTTTGGAACGTTGCATATGGGGTCAAGGGGACGGATCAACCATCCCCGTTTACGACACTCCTATTGGCAAAATCGGTGCTGCTATTTGCTGGGAGAATAGGATGCCCCTCTACAGAACTGCATTGTACGCTAAAGGCATTGAGATTTATTGTGCACCTACTGCTGATTATTCGTTGGAATGGCAAGCATCGATGATTCACATTGCGGTAGAAGGTGGATGTTTCGTGTTGTCAGCGCACCAGTTCTGCAAGCGTAGAGAGTTCCCTGAACATCCTGATTACTTGTTTAATGACATAGTAGACACTAAAGAACATGATCCTACTGTCTCCGGAGGTGGAAGTGTCATTATTTCACCTTTGGGAAAGGTTCTCGCCGGACCAAACTATGAATCAGAGGGTCTCGTCACAGCTGATCTTGATCTTGGTGATATAGCAAGAGCCAAGTTATACTTCGATGTGGTTGGACATTACTCAAAGCCAGATATTTTTAACTTGACCGTAAATGAGCACCCGAAGAAACCGGTTACATTCATGACGAAGGTCGAGAAAGCAGAGGATGAATCAAACAAATAGTCAAGATTTGCAATTCGTCTACTGAAGTTAAGTCAAGTTCGAAATGTTTTTTTTTCAGTTTTAAAGTTGATGTTCAAGTTTATTTTTCTTTCTCTTCAATAATGTAAGAGGACTATTTCGATATGTTAAAATAAAACCAATTGGTTCTCTCCTCTTGTATTCAATTGTCGTGTAATAATGTTTTGTTCAATTCGAGTGTTGATTAAGTTGTATTCTTTATTTTTCCTTTGCATGTCAAACACAGATTTTTTGCTGTTTAAATAAGTTGCTAGCTAAGTCTAGATGTGAGTTTGAAAAGTCACTACAAAACTACTTAAT
CDS Sequence
- >AT3G44320.1
ATGTCTAGTACTGAAGAAATGTCATCAGTCAAAAACACAACTCAGGTTATTGGCGTTGACCCATCCTCCACCGTACGAGTTACCATCGTTCAATCTTCCACCGTCTATAATGATACCCCGGCCACTTTAGACAAGGCGGAGAAGTTTATTGTGGAGGCGGCGAGCAAAGGAGCGAAGTTGGTGTTGTTTCCCGAGGCGTTCATCGGCGGTTATCCTCGAGGTTTTAGGTTTGGTTTAGCGGTGGGAGTTCATAACGAAGAAGGGCGTGATGAGTTTCGTAACTACCATGCTTCTGCTATTAAAGTCCCTGGCCCTGAAGTGGAAAGATTGGCTGAGTTGGCCGGGAAAAATAATGTGCACTTGGTAATGGGGGCTATAGAGAAGGATGGTTATACACTCTATTGCACAGCTCTTTTCTTCAGTCCACAAGGTCAGTTTTTAGGTAAGCACCGTAAAGTCATGCCCACATCTTTGGAACGTTGCATATGGGGTCAAGGGGACGGATCAACCATCCCCGTTTACGACACTCCTATTGGCAAAATCGGTGCTGCTATTTGCTGGGAGAATAGGATGCCCCTCTACAGAACTGCATTGTACGCTAAAGGCATTGAGATTTATTGTGCACCTACTGCTGATTATTCGTTGGAATGGCAAGCATCGATGATTCACATTGCGGTAGAAGGTGGATGTTTCGTGTTGTCAGCGCACCAGTTCTGCAAGCGTAGAGAGTTCCCTGAACATCCTGATTACTTGTTTAATGACATAGTAGACACTAAAGAACATGATCCTACTGTCTCCGGAGGTGGAAGTGTCATTATTTCACCTTTGGGAAAGGTTCTCGCCGGACCAAACTATGAATCAGAGGGTCTCGTCACAGCTGATCTTGATCTTGGTGATATAGCAAGAGCCAAGTTATACTTCGATGTGGTTGGACATTACTCAAAGCCAGATATTTTTAACTTGACCGTAAATGAGCACCCGAAGAAACCGGTTACATTCATGACGAAGGTCGAGAAAGCAGAGGATGAATCAAACAAATAG
Protein Sequence
- >AT3G44320.1
MSSTEEMSSVKNTTQVIGVDPSSTVRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYPRGFRFGLAVGVHNEEGRDEFRNYHASAIKVPGPEVERLAELAGKNNVHLVMGAIEKDGYTLYCTALFFSPQGQFLGKHRKVMPTSLERCIWGQGDGSTIPVYDTPIGKIGAAICWENRMPLYRTALYAKGIEIYCAPTADYSLEWQASMIHIAVEGGCFVLSAHQFCKRREFPEHPDYLFNDIVDTKEHDPTVSGGGSVIISPLGKVLAGPNYESEGLVTADLDLGDIARAKLYFDVVGHYSKPDIFNLTVNEHPKKPVTFMTKVEKAEDESNK