Information report for AT3G43270
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0045490 — involved in — pectin catabolic process
- GO:0046910 — enables — pectinesterase inhibitor activity
- GO:0010035 — acts upstream of or within — response to inorganic substance
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0044272 — acts upstream of or within — sulfur compound biosynthetic process
- GO:0006979 — acts upstream of or within — response to oxidative stress
- GO:0042545 — involved in — cell wall modification
- GO:0009611 — acts upstream of or within — response to wounding
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0030599 — enables — pectinesterase activity
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , flower
Literature and News
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily. DOI: 10.3389/fpls.2022.863892 ; PMID: 35401607
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- Cell identity mediates the response of Arabidopsis roots to abiotic stress. DOI: 10.1126/science.1153795 ; PMID: 18436742
Gene Resources
- UniProt: A0A178VEB9
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VEB9
- EnsemblPlants: AT3G43270.1
- Gramene: AT3G43270.1
- KEGG: ath:AT3G43270
- Orthologous matrix: SAHKEAF
- ExpressionAtlas: AT3G43270
- InterPro: IPR000070, IPR006501, IPR011050
- PANTHER: PTHR31707
- SUPFAM: SSF101148, SSF51126
- PROSITE: PS00503, PS00800
- Gene3D: 1.20.140.40, 2.160.20.10
- SWISS-MODEL: A0A178VEB9
- Conserved Domain Database: cd15799
Homologs
- Brachypodium distachyon BRADI_2g11860v3
- Glycine max Glyma.01G138100, Glyma.01G138000
- Manihot esculenta MANES_04G151000, MANES_05G047700
- Nicotiana attenuata A4A49_12311
- Oryza sativa PME40, LOC_Os01g21034
- Populus trichocarpa POPTR_015G127700v3
- Setaria viridis SEVIR_5G021100v2
Sequences
cDNA Sequence
- >AT3G43270.1
AATACCAAGAAGTTTTGGGCCGAAATCCGTAATCTCCCTAAACTCGAAACCACAACATATAATATTAGTTTCATCCCAAACATTACTCGAACCGGCAACATCTAAACTTTACCTAGAATTTTTACCAATTGAACTAACAATACTTAGTAAAAATTCCTAATCTCATCCATAACTGATGGTATAAAAAGCAAAGGTAGGTCGTCTTTTTTCTTGCCTACTGCCTAGCCATTACCCTCTCTCTCTCTTTATAATAAATAACATCACACATCACTTACATTCACTCTTCACAAAGATATTATAGAGTGTGAGAGAGAGACACTCTTGTTTCATCTTCAACTTCCACTACCTTTGCAAGATTCTACCTGAGATAGATGGCGAAGTTCCGACAAATGGGTTCATCAATCTTCTTCCTCTTTCTTATCATAATCTCATTATGTTCCGCCCACAAAGAAGCGTTTTCTTCAACTGATCTTGTTCAAATGGAGTGCTTGAGAGTCCCACCGTTAGAGTTTGCTGAAGCGGCCAAAACCGTCGTCGACGCTATAACAAAAGCGGTAGCTATAGTGTCCAAGTTCGACAAGAAAGCCGGGAAGTCGCGAGTCTCCAATGCGATTGTTGATTGTGTTGATCTTCTTGATTCTGCCGCCGAAGAGCTTTCTTGGATCATCTCTGCCTCTCAATCCCCCAACGGTAAAGACAATAGCACAGGAGACGTGGGTTCGGATCTAAGGACATGGATAAGCGCCGCACTTTCTAACCAGGACACATGTCTTGACGGTTTCGAGGGTACTAATGGAATTATCAAAAAGATAGTGGCCGGTGGTCTTAGCAAGGTTGGTACGACCGTTCGGAATTTACTAACGATGGTTCACTCTCCTCCCTCTAAGCCCAAACCTAAGCCCATTAAGGCCCAGACAATGACGAAAGCTCATAGTGGCTTCAGTAAGTTCCCCTCATGGGTTAAACCCGGTGATCGGAAGTTGTTGCAAACTGATAACATAACGGTTGCTGACGCGGTTGTAGCCGCAGACGGGACCGGAAATTTCACGACGATAAGTGACGCGGTGTTGGCTGCACCGGACTATAGTACCAAAAGATATGTCATACATGTAAAAAGAGGTGTGTATGTAGAGAATGTGGAGATTAAAAAGAAGAAATGGAACATTATGATGGTTGGTGACGGCATCGATGCCACCGTGATCACGGGTAACCGGAGTTTCATCGACGGCTGGACTACTTTCCGATCTGCTACATTTGCTGTGAGCGGTAGAGGATTTATTGCACGCGATATCACCTTCCAAAACACAGCAGGACCGGAAAAACACCAAGCGGTCGCAATCCGATCCGATACGGATCTCGGGGTCTTTTATCGATGCGCGATGAGAGGTTACCAAGACACTCTCTATGCCCACTCAATGCGTCAATTCTTTAGAGAATGCATTATAACAGGCACTGTAGACTTTATATTCGGAGACGCCACAGCAGTATTCCAAAGCTGCCAAATCAAAGCCAAACAAGGCCTTCCAAACCAGAAGAATAGCATCACGGCTCAAGGACGTAAGGATCCAAATGAGCCAACCGGTTTCACAATCCAATTCAGCAATATAGCAGCTGATACCGACCTACTTCTAAACTTAAATACTACGGCTACTTACTTAGGTCGGCCGTGGAAACTATATTCTAGGACGGTGTTCATGCAAAACTACATGAGTGATGCAATCAACCCCGTAGGATGGCTTGAATGGAATGGAAATTTTGCGTTGGATACATTATATTATGGTGAGTATATGAATAGCGGACCGGGGGCTAGTCTTGACCGCCGTGTTAAGTGGCCAGGATACCATGTGTTGAATACTTCGGCCGAGGCTAATAATTTTACAGTATCTCAACTCATACAAGGGAACTTGTGGTTACCATCAACTGGTATCACGTTCATTGCTGGTCTAGTCTCGTAAATTAATCATGTTTGATCGAATTCTAATATTATCATTTGATATATCATTTCTATTATACTAAACGTTATAATTATGTTTCTTGATGTTTTCTATTTTGTATATGGTTTTGGTTAAATTATTATTATTATTATTATTTTGGTGATATTGAACTACAAGTTCTCTACGTTTGATATGTATTTAATGAGTTATTTTACTCGTAGAATTAAAGTCATATGTCAACCACATTTTTCTACCATTGATCTTCAAACAATGGATTTTATACATAATATTCTTTTCC
CDS Sequence
- >AT3G43270.1
ATGGCGAAGTTCCGACAAATGGGTTCATCAATCTTCTTCCTCTTTCTTATCATAATCTCATTATGTTCCGCCCACAAAGAAGCGTTTTCTTCAACTGATCTTGTTCAAATGGAGTGCTTGAGAGTCCCACCGTTAGAGTTTGCTGAAGCGGCCAAAACCGTCGTCGACGCTATAACAAAAGCGGTAGCTATAGTGTCCAAGTTCGACAAGAAAGCCGGGAAGTCGCGAGTCTCCAATGCGATTGTTGATTGTGTTGATCTTCTTGATTCTGCCGCCGAAGAGCTTTCTTGGATCATCTCTGCCTCTCAATCCCCCAACGGTAAAGACAATAGCACAGGAGACGTGGGTTCGGATCTAAGGACATGGATAAGCGCCGCACTTTCTAACCAGGACACATGTCTTGACGGTTTCGAGGGTACTAATGGAATTATCAAAAAGATAGTGGCCGGTGGTCTTAGCAAGGTTGGTACGACCGTTCGGAATTTACTAACGATGGTTCACTCTCCTCCCTCTAAGCCCAAACCTAAGCCCATTAAGGCCCAGACAATGACGAAAGCTCATAGTGGCTTCAGTAAGTTCCCCTCATGGGTTAAACCCGGTGATCGGAAGTTGTTGCAAACTGATAACATAACGGTTGCTGACGCGGTTGTAGCCGCAGACGGGACCGGAAATTTCACGACGATAAGTGACGCGGTGTTGGCTGCACCGGACTATAGTACCAAAAGATATGTCATACATGTAAAAAGAGGTGTGTATGTAGAGAATGTGGAGATTAAAAAGAAGAAATGGAACATTATGATGGTTGGTGACGGCATCGATGCCACCGTGATCACGGGTAACCGGAGTTTCATCGACGGCTGGACTACTTTCCGATCTGCTACATTTGCTGTGAGCGGTAGAGGATTTATTGCACGCGATATCACCTTCCAAAACACAGCAGGACCGGAAAAACACCAAGCGGTCGCAATCCGATCCGATACGGATCTCGGGGTCTTTTATCGATGCGCGATGAGAGGTTACCAAGACACTCTCTATGCCCACTCAATGCGTCAATTCTTTAGAGAATGCATTATAACAGGCACTGTAGACTTTATATTCGGAGACGCCACAGCAGTATTCCAAAGCTGCCAAATCAAAGCCAAACAAGGCCTTCCAAACCAGAAGAATAGCATCACGGCTCAAGGACGTAAGGATCCAAATGAGCCAACCGGTTTCACAATCCAATTCAGCAATATAGCAGCTGATACCGACCTACTTCTAAACTTAAATACTACGGCTACTTACTTAGGTCGGCCGTGGAAACTATATTCTAGGACGGTGTTCATGCAAAACTACATGAGTGATGCAATCAACCCCGTAGGATGGCTTGAATGGAATGGAAATTTTGCGTTGGATACATTATATTATGGTGAGTATATGAATAGCGGACCGGGGGCTAGTCTTGACCGCCGTGTTAAGTGGCCAGGATACCATGTGTTGAATACTTCGGCCGAGGCTAATAATTTTACAGTATCTCAACTCATACAAGGGAACTTGTGGTTACCATCAACTGGTATCACGTTCATTGCTGGTCTAGTCTCGTAA
Protein Sequence
- >AT3G43270.1
MAKFRQMGSSIFFLFLIIISLCSAHKEAFSSTDLVQMECLRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGLVS