Information report for AT3G42660
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005515 — enables — protein binding
- GO:0003682 — enables — chromatin binding
- GO:0040029 — acts upstream of or within — epigenetic regulation of gene expression
- GO:0005634 — located in — nucleus
- GO:0006281 — involved in — DNA repair
- GO:0006261 — involved in — DNA-templated DNA replication
- GO:0043596 — is active in — nuclear replication fork
- GO:0009733 — involved in — response to auxin
- GO:0000278 — involved in — mitotic cell cycle
- eol1-1/lhp1-3 — Small plants and early flowering.
Functional Keywords
Literature and News
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- Dynamic evolution at pericentromeres. DOI: 10.1101/gr.4399206 ; PMID: 16461884
- An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis. DOI: 10.1105/tpc.107.051540 ; PMID: 17526749
- A predicted interactome for Arabidopsis. DOI: 10.1104/pp.107.103465 ; PMID: 17675552
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Ctf4-related protein recruits LHP1-PRC2 to maintain H3K27me3 levels in dividing cells in Arabidopsis thaliana. DOI: 10.1073/pnas.1620955114 ; PMID: 28428341
- Rice and Arabidopsis homologs of yeast CHROMOSOME TRANSMISSION FIDELITY PROTEIN 4 commonly interact with Polycomb complexes but exert divergent regulatory functions. DOI: 10.1093/plcell/koab047 ; PMID: 33647940
Gene Resources
Homologs
- Citrullus lanatus Cla97C01G017310
- Cucumis melo MELO3C007681
- Cucumis sativus CsGy6G028950
- Glycine max Glyma.07G248900, Glyma.17G025400
- Gossypium hirsutum Gohir.A11G210200, Gohir.D11G212900
- Manihot esculenta MANES_12G119800
- Sesamum indicum SIN_1025637
Sequences
cDNA Sequence
- >AT3G42660.1
ATGAAATCACGATCTCTAAAGCTCCGGGAAGCCCATAAAGTCGGCGGAAGCGCCGCCTTCTGCTCTATCCTCTGGGACCACAAAGCCGAACATTTCGTCACTTCATCTTCTTCGGATCCCTCAATCTCCGTCCACGATGGACTCTCAACCTCCACATTACCCCCGACGATTCTCCGTCATCACCAAGACGGCGTCACCTCCTTGGCTCTTAGCAACGACTCTACTCTCCTCGCCTCTGGATCTATCGATCATTGCGTCAAGCTCTACAAGTTCCCAAGTGGGGAATTTCAGACGAACATTACTAGATTTACACTTCCGATTCGCGTGCTTGCGTTTAACGGCTCAGGGAGTCTATTAGCAGCTGCAGGAGATGATGAAGGAATCAAACTTATCAATACATTTGATGGTTCGATTGTTAGAGTTTTGAAAGGGCACAAAGGACCAGTGACCGGCTTAGATTTCCATCCTAATGGTGAGCTTTTAGCTTCGATTGACACAACTGGTACTGTGTTATGCTGGGAACTTCAAAACGGAGTCGTTTCGTTTACCCTTAAGGGTGTTGCGCCAGATACCGGTTTCAACACTTCCATTGTGAATATTCCTAGATGGAGCCCTGATGGAAGAACTCTCGCTGTGCCTGGTTTGAGAAACGATGTTGTGATGTATGATAGATTCACTGGGGAGAAGCTTTTTGCCTTGAGAGGTGATCATCTCGAGGCTATATGTTATTTAACGTGGGCTCCTAATGGCAAGTATATAGCTACATCTGGTCTTGATAAACAAGTGCTTCTTTGGGATGTTGATAAGAAACAAGACATAGATAGGCATAAATTTGAGGAGAGGATATGTTGTATGTCGTGGAAACCGAATGGTAATGCATTGTCGGTTATCGATGCCAAGGGAAGATATGGAGTTTGGGAATCTTTGGTTCCATCATCTATGCTATCTCCTACAGTTGGTGTTCCAGATATAGTACCAAAGAAGAGGAATGAGATTCTTGATTTTGATGATGAAGTTGAGGAAGAAATTTATCGTGCATCTGAAAGTTTAGATGATGCTATGGGAGATAGTGATGATGGAGAATCTCATCATACTAGTAGGAAAAGATTGAGGAAGAAAACTTTGATTGATGAAGATGTTGATGATGCATATGAGGAACTTAATGATGGGAGTAGCTTACCTTCGGCATCTGAGTACAGGAAAAAGTCACATAGAGGACATAGAGAGAAGCAGGGTGCAAGAAGTGGGGCTTTTAAAGGCATTTCAGCCTCAACCAAGTACAAAATGCAAAGTTCCTTTCAACCTGGTGCAACACCACCGGAACCAGGAAAACGGACATTCTTGTGTTACAATATGCTGGGATGTATAACTACTATTGAACATGAGGGGAACTCACGTATTGAGACAGATTTTCATGATACTGGAAGAGGTCCACGAGTTTCATCGATGATAGACATTTACGGCTTCACTATGGCATCAATAAATGAAACTGGGTGTGTCTTTGCAAATCCCTGTAAGGGAGAAAAGAACATGAGTGTTCTGATGTATCGACCATTTAGAAGCTGGGCCAGTAATAGTGAGTGGACAATGAGATTTGAAGGTGAAGAGGTGAAAGTTGTTGCTAACGGTTCTGGTTGGGTTGCTGCAGTTACAAGCCTCAATTTGCTTCGTGTATTTAGCGAGGGCGGTTTACAGAAACATATTCTTTCTCTTGATGGGCCCGTAGTCACTGCAGTAGGATGCAAGGATCATCTAGCTGTGGTAACTCATGTTTCAGACTGTCTTCCTTCAAATGAACAGGTGATGGAATTTAGAGTCTTTAACATATCCAAAATGACTCAGGAGTTGAAAGGCCGTGTTGCCTTAACCCCTGGCTCACGTTTAACATGGATAGGATTCAGTGAAGAAGGTTCTTTGAGCTCATATGATTCTGAGGGTGTGTTGAGGGTTTTTACAAGTCAATATGGTGGCTCATGGATCCCAGTTTTCAGTACCAGTAAAGAGAAGAAACAAGAAGAAAACTACTGGGTGGTTGGCTTGAATACAAGCAGTTTGTACTGTATAGCTTGCAAATACGCGGAGATGTTCCCACAGGTGACACCAAAACCAATCCTTACCATACTAGACCTTTCTCTCCCGCTTGCATCCTCAGATTTAGGAGCAGCATCTCTAGAAAATGAGTTAATACTAAAGCAGCTGCGTTTATACGAGACTCAACGAAAAGTGGACGATATGGCTTTGGTCGGGGTAGACACAACAGCACTTGAAGATGAAGCTTTTGACCTGGAAGTTTCTCAAGATAAATGCATACTAAGGCTCATCAGCTCGTGTTGTAGTAGTGATAGTTTTGCAAGGGCCAGTGAACTTATGGAGCTTTTAACTCTAGAAAAATCAATGAGAGCTGCAATAACACTGGTTACCAAACTCAAGCTTCCTTTTTTGGCAGAGAAATTCAGCAGCATACTCGAGGAAAGGTTGCTTGAAGAAGCTAGCGAGGCGGCGGTAACAAATCCTGCGCTGAATCCAAACGGAGAAGTAGTTACAAGAGTTGAATCCAAGGTCCAGAATCCTCCAGCTTCGATTCAGACTAGTGAAAACACAGAAGCAGTTATGAAATCTTCTGCAACTAAGCTATCTGCTCCTACACTTCTAAAGAAATCGAAAGTTTCAGAAGGTCTAAAGCTGGGAAAAGAACAAACAAAGAAAGACAAAAGTGACGATGCGAAGATAAAAGAGATAAAGAAATTGAATTTGAAGAATCCGGTGAACAATGTTAACAAGGAAGACAAGGGACAGGAAAAGGAAGTGAATCAAGGAGAAGCTCGACGTTCTTCAAACCCGTTCCTCAAATCAACTGTTTAA
CDS Sequence
- >AT3G42660.1
ATGAAATCACGATCTCTAAAGCTCCGGGAAGCCCATAAAGTCGGCGGAAGCGCCGCCTTCTGCTCTATCCTCTGGGACCACAAAGCCGAACATTTCGTCACTTCATCTTCTTCGGATCCCTCAATCTCCGTCCACGATGGACTCTCAACCTCCACATTACCCCCGACGATTCTCCGTCATCACCAAGACGGCGTCACCTCCTTGGCTCTTAGCAACGACTCTACTCTCCTCGCCTCTGGATCTATCGATCATTGCGTCAAGCTCTACAAGTTCCCAAGTGGGGAATTTCAGACGAACATTACTAGATTTACACTTCCGATTCGCGTGCTTGCGTTTAACGGCTCAGGGAGTCTATTAGCAGCTGCAGGAGATGATGAAGGAATCAAACTTATCAATACATTTGATGGTTCGATTGTTAGAGTTTTGAAAGGGCACAAAGGACCAGTGACCGGCTTAGATTTCCATCCTAATGGTGAGCTTTTAGCTTCGATTGACACAACTGGTACTGTGTTATGCTGGGAACTTCAAAACGGAGTCGTTTCGTTTACCCTTAAGGGTGTTGCGCCAGATACCGGTTTCAACACTTCCATTGTGAATATTCCTAGATGGAGCCCTGATGGAAGAACTCTCGCTGTGCCTGGTTTGAGAAACGATGTTGTGATGTATGATAGATTCACTGGGGAGAAGCTTTTTGCCTTGAGAGGTGATCATCTCGAGGCTATATGTTATTTAACGTGGGCTCCTAATGGCAAGTATATAGCTACATCTGGTCTTGATAAACAAGTGCTTCTTTGGGATGTTGATAAGAAACAAGACATAGATAGGCATAAATTTGAGGAGAGGATATGTTGTATGTCGTGGAAACCGAATGGTAATGCATTGTCGGTTATCGATGCCAAGGGAAGATATGGAGTTTGGGAATCTTTGGTTCCATCATCTATGCTATCTCCTACAGTTGGTGTTCCAGATATAGTACCAAAGAAGAGGAATGAGATTCTTGATTTTGATGATGAAGTTGAGGAAGAAATTTATCGTGCATCTGAAAGTTTAGATGATGCTATGGGAGATAGTGATGATGGAGAATCTCATCATACTAGTAGGAAAAGATTGAGGAAGAAAACTTTGATTGATGAAGATGTTGATGATGCATATGAGGAACTTAATGATGGGAGTAGCTTACCTTCGGCATCTGAGTACAGGAAAAAGTCACATAGAGGACATAGAGAGAAGCAGGGTGCAAGAAGTGGGGCTTTTAAAGGCATTTCAGCCTCAACCAAGTACAAAATGCAAAGTTCCTTTCAACCTGGTGCAACACCACCGGAACCAGGAAAACGGACATTCTTGTGTTACAATATGCTGGGATGTATAACTACTATTGAACATGAGGGGAACTCACGTATTGAGACAGATTTTCATGATACTGGAAGAGGTCCACGAGTTTCATCGATGATAGACATTTACGGCTTCACTATGGCATCAATAAATGAAACTGGGTGTGTCTTTGCAAATCCCTGTAAGGGAGAAAAGAACATGAGTGTTCTGATGTATCGACCATTTAGAAGCTGGGCCAGTAATAGTGAGTGGACAATGAGATTTGAAGGTGAAGAGGTGAAAGTTGTTGCTAACGGTTCTGGTTGGGTTGCTGCAGTTACAAGCCTCAATTTGCTTCGTGTATTTAGCGAGGGCGGTTTACAGAAACATATTCTTTCTCTTGATGGGCCCGTAGTCACTGCAGTAGGATGCAAGGATCATCTAGCTGTGGTAACTCATGTTTCAGACTGTCTTCCTTCAAATGAACAGGTGATGGAATTTAGAGTCTTTAACATATCCAAAATGACTCAGGAGTTGAAAGGCCGTGTTGCCTTAACCCCTGGCTCACGTTTAACATGGATAGGATTCAGTGAAGAAGGTTCTTTGAGCTCATATGATTCTGAGGGTGTGTTGAGGGTTTTTACAAGTCAATATGGTGGCTCATGGATCCCAGTTTTCAGTACCAGTAAAGAGAAGAAACAAGAAGAAAACTACTGGGTGGTTGGCTTGAATACAAGCAGTTTGTACTGTATAGCTTGCAAATACGCGGAGATGTTCCCACAGGTGACACCAAAACCAATCCTTACCATACTAGACCTTTCTCTCCCGCTTGCATCCTCAGATTTAGGAGCAGCATCTCTAGAAAATGAGTTAATACTAAAGCAGCTGCGTTTATACGAGACTCAACGAAAAGTGGACGATATGGCTTTGGTCGGGGTAGACACAACAGCACTTGAAGATGAAGCTTTTGACCTGGAAGTTTCTCAAGATAAATGCATACTAAGGCTCATCAGCTCGTGTTGTAGTAGTGATAGTTTTGCAAGGGCCAGTGAACTTATGGAGCTTTTAACTCTAGAAAAATCAATGAGAGCTGCAATAACACTGGTTACCAAACTCAAGCTTCCTTTTTTGGCAGAGAAATTCAGCAGCATACTCGAGGAAAGGTTGCTTGAAGAAGCTAGCGAGGCGGCGGTAACAAATCCTGCGCTGAATCCAAACGGAGAAGTAGTTACAAGAGTTGAATCCAAGGTCCAGAATCCTCCAGCTTCGATTCAGACTAGTGAAAACACAGAAGCAGTTATGAAATCTTCTGCAACTAAGCTATCTGCTCCTACACTTCTAAAGAAATCGAAAGTTTCAGAAGGTCTAAAGCTGGGAAAAGAACAAACAAAGAAAGACAAAAGTGACGATGCGAAGATAAAAGAGATAAAGAAATTGAATTTGAAGAATCCGGTGAACAATGTTAACAAGGAAGACAAGGGACAGGAAAAGGAAGTGAATCAAGGAGAAGCTCGACGTTCTTCAAACCCGTTCCTCAAATCAACTGTTTAA
Protein Sequence
- >AT3G42660.1
MKSRSLKLREAHKVGGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKPNGNALSVIDAKGRYGVWESLVPSSMLSPTVGVPDIVPKKRNEILDFDDEVEEEIYRASESLDDAMGDSDDGESHHTSRKRLRKKTLIDEDVDDAYEELNDGSSLPSASEYRKKSHRGHREKQGARSGAFKGISASTKYKMQSSFQPGATPPEPGKRTFLCYNMLGCITTIEHEGNSRIETDFHDTGRGPRVSSMIDIYGFTMASINETGCVFANPCKGEKNMSVLMYRPFRSWASNSEWTMRFEGEEVKVVANGSGWVAAVTSLNLLRVFSEGGLQKHILSLDGPVVTAVGCKDHLAVVTHVSDCLPSNEQVMEFRVFNISKMTQELKGRVALTPGSRLTWIGFSEEGSLSSYDSEGVLRVFTSQYGGSWIPVFSTSKEKKQEENYWVVGLNTSSLYCIACKYAEMFPQVTPKPILTILDLSLPLASSDLGAASLENELILKQLRLYETQRKVDDMALVGVDTTALEDEAFDLEVSQDKCILRLISSCCSSDSFARASELMELLTLEKSMRAAITLVTKLKLPFLAEKFSSILEERLLEEASEAAVTNPALNPNGEVVTRVESKVQNPPASIQTSENTEAVMKSSATKLSAPTLLKKSKVSEGLKLGKEQTKKDKSDDAKIKEIKKLNLKNPVNNVNKEDKGQEKEVNQGEARRSSNPFLKSTV