Information report for AT3G30260
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0010582 — involved in — floral meristem determinacy
- GO:0010228 — involved in — vegetative to reproductive phase transition of meristem
- GO:0046983 — enables — protein dimerization activity
- GO:0005515 — enables — protein binding
- GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
- GO:0048366 — acts upstream of or within — leaf development
- GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0010311 — acts upstream of or within — lateral root formation
- GO:0010228 — acts upstream of or within — vegetative to reproductive phase transition of meristem
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
- GO:0010223 — acts upstream of or within — secondary shoot formation
- GO:0005737 — located in — cytoplasm
- GO:0010629 — involved in — negative regulation of gene expression
- CS85520 — Short petioles; short internodes; short pedicels; compact and bushy plants; reduced apical dominance; numerous lateral inflorescences; reduced fertility; very short siliques; average height = 28 cm.
Functional Keywords
Literature and News
- Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. DOI: 10.1105/tpc.011544 ; PMID: 12837945
- Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. DOI: 10.1104/pp.104.047019 ; PMID: 15375205
- Floral gene resources from basal angiosperms for comparative genomics research. DOI: 10.1186/1471-2229-5-5 ; PMID: 15799777
- miR156/SPL10 Modulates Lateral Root Development, Branching and Leaf Morphology in Arabidopsis by Silencing AGAMOUS-LIKE 79. DOI: 10.3389/fpls.2017.02226 ; PMID: 29354153
- Transcriptional repressor AGL79 positively regulates flowering time in Arabidopsis. DOI: 10.1016/j.jplph.2023.153985 ; PMID: 37148653
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: Q7X9H6
- EMBL: AY141238, CP002686
- AlphaFoldDB: Q7X9H6
- EnsemblPlants: AT3G30260.1
- Gramene: AT3G30260.1
- KEGG: ath:AT3G30260
- Orthologous matrix: WGDEYGI
- ExpressionAtlas: AT3G30260
Homologs
- Brassica napus BnaA09G0045700ZS, GSBRNA2T00109576001, BnaC02G0480300ZS, GSBRNA2T00082884001, GSBRNA2T00144478001
- Brassica oleracea XP_013619388.1, XP_013619387.1, Bo2g149440, XP_013596539.1, XP_013610595.1, Bo9g009030
- Brassica rapa XP_009111804.1, Bra036201, XP_009151758.1
- Raphanus raphanistrum RrC6330_p1, RrC14020_p1
Sequences
cDNA Sequence
- >AT3G30260.1
ATACTTTCTCTTTTTCCCTCCATATGCCTTTTGTGTGTATAAATATATGTATATGAATAAGTTCACAAAAATAGAAAATTAAATCAAATCTTCGCGTAATTTCTCATCAAACTCCACTTTTCTTCTTTTTAAGAGAATCTAGGGTTTCTTCTACTACTTCTTCTTTCTTCTTTAGGTGGTCAAATTTCCAAGTTCTTCTTTTAGCTCTCTCTTTTGTTTCCAAGAAACCTGAGAAGAATTTTTGTAGATATGGGAAGAGGAAGGGTTCAGCTACGGCGGATCGAGAATAAGATAAGGAGACAAGTGACATTTTCAAAGCGAAGGACCGGTTTGGTAAAGAAAGCTCAAGAGATCTCAGTGTTATGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCCCAAAGGCAAACTCTTTGAGTACTCTGCTGGTTCCAGCATGGAGAGAATTCTTGATCGATATGAGAGGTCTGCCTACGCCGGTCAAGATATTCCTACACCAAATTTGGATTCACAGGGAGAGTGCTCAACAGAATGTTCAAAGCTCTTGAGGATGATTGATGTCCTGCAAAGAAGCCTGAGGCACTTAAGAGGAGAAGAGGTGGATGGTCTAAGTATCAGAGACCTTCAAGGTGTGGAGATGCAACTTGATACTGCCCTCAAGAAAACTCGCTCTAGAAAGAACCAGCTCATGGTAGAGTCCATAGCACAGCTTCAGAAAAAGGAGAAGGAACTAAAAGAACTGAAGAAACAGCTAACAAAGAAGGCTGGTGAAAGGGAAGACTTTCAAACGCAAAACCTCAGCCATGACTTAGCCTCCTTGGCAACACCGCCATTTGAATCACCCCATGAGCTTCGCCGGACAATATCTCCTCCTCCTCCTCCTTTATCTTCGGGGGATACATCACAAAGGGATGGAGTTGGAGAAGTAGCTGCCGGAACCCTAATTCGAAGGACGAATGCAACGTTGCCTCATTGGATGCCCCAGCTCACCGGAGAATAGAGGTCCGAAACAATCTTGGTTTTTTAATTTTCTGTACTTAATATATAGTACCGGAATAACTTCTTGAGTTAAGTAGAACCAATCCGAATAAAAGAAAATATCTTCTGGCTTGGCATTCTAGGAACAGGCTTAAGAGGCCCTCAAGTTTCAAACTTTGAACGAATTTAGAAACATTGTATGTCTAATGTGATTTTGTATATTGTATCTACGATTTTCACTTTACTGTTTGTGAAAAATGTAATTTCAGTGTAATGAAAAAGAAGAAAAGAACTATAAACTATATTTT
CDS Sequence
- >AT3G30260.1
ATGGGAAGAGGAAGGGTTCAGCTACGGCGGATCGAGAATAAGATAAGGAGACAAGTGACATTTTCAAAGCGAAGGACCGGTTTGGTAAAGAAAGCTCAAGAGATCTCAGTGTTATGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCCCAAAGGCAAACTCTTTGAGTACTCTGCTGGTTCCAGCATGGAGAGAATTCTTGATCGATATGAGAGGTCTGCCTACGCCGGTCAAGATATTCCTACACCAAATTTGGATTCACAGGGAGAGTGCTCAACAGAATGTTCAAAGCTCTTGAGGATGATTGATGTCCTGCAAAGAAGCCTGAGGCACTTAAGAGGAGAAGAGGTGGATGGTCTAAGTATCAGAGACCTTCAAGGTGTGGAGATGCAACTTGATACTGCCCTCAAGAAAACTCGCTCTAGAAAGAACCAGCTCATGGTAGAGTCCATAGCACAGCTTCAGAAAAAGGAGAAGGAACTAAAAGAACTGAAGAAACAGCTAACAAAGAAGGCTGGTGAAAGGGAAGACTTTCAAACGCAAAACCTCAGCCATGACTTAGCCTCCTTGGCAACACCGCCATTTGAATCACCCCATGAGCTTCGCCGGACAATATCTCCTCCTCCTCCTCCTTTATCTTCGGGGGATACATCACAAAGGGATGGAGTTGGAGAAGTAGCTGCCGGAACCCTAATTCGAAGGACGAATGCAACGTTGCCTCATTGGATGCCCCAGCTCACCGGAGAATAG
Protein Sequence
- >AT3G30260.1
MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDFQTQNLSHDLASLATPPFESPHELRRTISPPPPPLSSGDTSQRDGVGEVAAGTLIRRTNATLPHWMPQLTGE