Gene Details:

• Gene ID: AT3G30260
• Gene Symbol: AGL79
• Gene Name: AGAMOUS-like 79
• Description: AGAMOUS-like 79;(source:Araport11)
• TAIR Accession: locus:2102871
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G30260.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0000981  — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
• GO:0006357  — involved in — regulation of transcription by RNA polymerase II
• GO:0010582  — involved in — floral meristem determinacy
• GO:0010228  — involved in — vegetative to reproductive phase transition of meristem
• GO:0046983  — enables — protein dimerization activity
• GO:0005515  — enables — protein binding
• GO:0045944  — involved in — positive regulation of transcription by RNA polymerase II
• GO:0048366  — acts upstream of or within — leaf development
• GO:0000978  — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
• GO:0010311  — acts upstream of or within — lateral root formation
• GO:0010228  — acts upstream of or within — vegetative to reproductive phase transition of meristem
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0005634  — is active in — nucleus
• GO:0005634  — located in — nucleus
• GO:0010223  — acts upstream of or within — secondary shoot formation
• GO:0005737  — located in — cytoplasm
• GO:0010629  — involved in — negative regulation of gene expression

Germplasm Phenotype:

• CS85520  — Short petioles; short internodes; short pedicels; compact and bushy plants; reduced apical dominance; numerous lateral inflorescences; reduced fertility; very short siliques; average height = 28 cm.

Function-related keywords:

• root

Literature:

• Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.   DOI:  10.1105/tpc.011544 ;  PMID:  12837945
• Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen.   DOI:  10.1104/pp.104.047019 ;  PMID:  15375205
• Floral gene resources from basal angiosperms for comparative genomics research.   DOI:  10.1186/1471-2229-5-5 ;  PMID:  15799777
• miR156/SPL10 Modulates Lateral Root Development, Branching and Leaf Morphology in Arabidopsis by Silencing AGAMOUS-LIKE 79.   DOI:  10.3389/fpls.2017.02226 ;  PMID:  29354153
• Transcriptional repressor AGL79 positively regulates flowering time in Arabidopsis.   DOI:  10.1016/j.jplph.2023.153985 ;  PMID:  37148653
• Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.   DOI:  10.1093/molbev/msj051 ;  PMID:  16280546

Sequences: