Information report for AT3G29410
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0000263 — non-hair root epidermal cell — atrichoblast (exact), atricoblasto (Spanish, exact), 非毛根形成細胞、アトリコブラスト (Japanese, exact), non-hair cell (broad)
- GO:0051762 — involved in — sesquiterpene biosynthetic process
- GO:0016114 — involved in — terpenoid biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0010333 — enables — terpene synthase activity
- GO:0009975 — enables — cyclase activity
- GO:0016102 — involved in — diterpenoid biosynthetic process
- GO:0000287 — enables — magnesium ion binding
Functional Keywords
Literature and News
- Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. DOI: 10.1105/tpc.007989 ; PMID: 12566586
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Two sesquiterpene synthases are responsible for the complex mixture of sesquiterpenes emitted from Arabidopsis flowers. DOI: 10.1111/j.1365-313X.2005.02417.x ; PMID: 15918888
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis. DOI: 10.3389/fpls.2016.01761 ; PMID: 27933080
- Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases. DOI: 10.1016/j.xplc.2020.100051 ; PMID: 33367256
- Microarray expression profiling and functional characterization of AtTPS genes: duplicated Arabidopsis thaliana sesquiterpene synthase genes At4g13280 and At4g13300 encode root-specific and wound-inducible (Z)-gamma-bisabolene synthases. DOI: 10.1016/j.abb.2005.09.019 ; PMID: 16297850
Gene Resources
- UniProt: A0A1I9LLD7
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LLD7
- EnsemblPlants: AT3G29410.2
- Gramene: AT3G29410.2
- Orthologous matrix: YMEVGIS
- ExpressionAtlas: AT3G29410
- InterPro: IPR001906, IPR005630, IPR008930
- PANTHER: PTHR31225, PTHR31225:SF93
- SUPFAM: SSF48239, SSF48576
- Gene3D: 1.10.600.10, 1.50.10.130
- SWISS-MODEL: A0A1I9LLD7
- Conserved Domain Database: cd00684
Homologs
- Brassica napus BnaA07G0382800ZS
- Brassica oleracea Bo6g123900
- Brassica rapa Bra035120
- Capsicum annuum T459_25040, T459_25166
- Gossypium arboreum Cotton_A_17926_BGI-A2_v1.0
- Gossypium hirsutum Gohir.A01G100300, Gohir.D01G085000
- Malus domestica MDP0000245233, MDP0000253576
- Oryza sativa OsTPS19, OsTPS20, OsTPS24, OsTPS28, TPS46;OsTPS31
- Rosa chinensis RchiOBHm_Chr5g0023471
- Solanum tuberosum Soltu.DM.10G000500
Sequences
cDNA Sequence
- >AT3G29410.2
AACACATACATCCTAAGACAAGGGCCAAGTAAAGACTTTGATCTCGTGTCTCTCTTGTAACGAGAGTGTCTGAAAAATGGAAGCATCAAAATGTTTTGGTCCAAGAACTCTCCCTATCATTCACAACGTCCCTCTCTGTCTGAAGACCAACTTCTCTCTCTTTCCTTGCCGTTTGCTTCAAAGCCAATCTCTTTCCTCCAAGAAATCCACAAAACACTACTTGTTCCGTGTTAAGGCTGAGACTAGTGGCGATCTTGAGAGTACTCGTCCATTGACGTACTTTTCTCCATCTTATTGGGGAGATCACTTCCTCTCTGTTTCCATCGATGACTCCGTAAGTACACACCTGGTCCGATGTGTTTTAGTGGATATGTCTTGTTAGAGTACATGATTTGTTTTTTTGAATTGCATATTTGTAGGAATTTGAGGCACTTGAGAAAGAAATTGAAACGGTGTTCAAGCCTAAAGTGAGAGACATGCTCATGTCTCCTCACAGCAGCGACAAGGAGAGGATTCGTCTCATCCATTTGCTTATCAGCCTCGGTATCGCTTATTACTATGAGAATGAAATCGAGGAGATTTTACACAAGGCTTACGGGAAGTTGGCCTGCTTAATTTCGGACGAGGATGATTTGGAAACAATAGCAATCATGTTTGAGGTTTTCAGACTATATGGACACAAGATGCCTTGCGATGTGTTCGAGAGATTCAAAAGCGAAGATGGGAAGTTTAAGGAAAGTTTAGTTGGGGATGTTAGAGGGCTGCTACAGCTGTACGAAGCCGCGCATCTAGGAGCACCATCTGAAGATATAATGGATGAAGCCTTAAGTTTTGCGCGGTATCACTTGGAACCGTTGGCAGGCACCGAAACAAGCTCTAATCTTTTTAAGCATGTAGAAAACGTTTTGTATAGAGCTCGATATCATAGCATAGAGATACTAGTAGCACGACAGTACATCTCTTTCTATGATCAAGAAGAAGACCAAGATGAGACGCTCCTTAGGTTTTCAAAGCTCAATTTCAATTTTTGCCAGATGCATTACGTCAAAGAGCTCAAAATTGTCACTAGATGGTGGAAGGAGCTAGGTATCGCATCTAAGCTACCGTACTCCATAAGGGAGCGAAATGTGGAGACTTATCTTGGGGGCTTGGGAGTGCTTTTCGAGCCGCGATATTCACTTGCAAGAATTTTCTTAGCTAAACTAACACTGATCATGACTGTTGTGGATGATACATGTGATGCATATGCCACTCTTCCTGAAGTTCAGAGTCTTCATGATGCTTTTCATAGATGGGATCTGCGTGCCATGGAAGAACTACCGAGGTATATGAGAATCATCTACCAAAGTGTGTTCGAGACTGTGGAAGATATTGATCGAGAAATGATAGCTCGAGGAAAACATGGTCGGTTGCAACTAACCATAGATGAGATCAAGAGTCTGATGATATGGTATCTTGGGATAGCAAAATGGGCACGCTCAGATCAAGTGCCAAGCTTTGAGGATTACATGGAGATTGGGACACCCTCGTCTGCATTGGATGACTTTGCATCCTACGGCTTTATAGCAATGGACGATTGTGATCAGAAGCAATTGAAGGAATGGTTTTACTCCAAACCTAAAATCTTTCATGCCTTGAATGCTCTGTTTCGTATCAGAAATGACATTGTCACGTTCGAGCAAGAGATGAGCAGAGGAGAGGTGGCAAATGGTGTCAACTGTTACATGAAGCAACATGGTGTCACCAAAGAAGCAGCGGTTGAAGAACTGAGGAAGATGGAAAGAGAGAGTTATAAGATAATGATTGAGGAGTTCATGACGTCCAAAGCTATGCCACGACAGATTCTGGTGCGACCCGTCAACATTGCGCGTGTAATGGATTTGTTTTACAAAGAAGCCGATGGATTTGGGCATCCTGATCAAAAGCTCTTACAACTTATTGCGTCTTTGTTCCTCCATCCAATACCTCTTTGAACATTTATAAAAAGTTATATAAGGAGTTTTTATATATGTATGTGACTTTGAATAAGTGTTTTGTATATGTTTACTTTGAATTTGAATTTTCTTTAATTTATTTTACCAAACCGTTATAACTTTTAATATATTTGATATTAATA - >AT3G29410.1
AACACATACATCCTAAGACAAGGGCCAAGTAAAGACTTTGATCTCGTGTCTCTCTTGTAACGAGAGTGTCTGAAAAATGGAAGCATCAAAATGTTTTGGTCCAAGAACTCTCCCTATCATTCACAACGTCCCTCTCTGTCTGAAGACCAACTTCTCTCTCTTTCCTTGCCGTTTGCTTCAAAGCCAATCTCTTTCCTCCAAGAAATCCACAAAACACTACTTGTTCCGTGTTAAGGCTGAGACTAGTGGCGATCTTGAGAGTACTCGTCCATTGACGTACTTTTCTCCATCTTATTGGGGAGATCACTTCCTCTCTGTTTCCATCGATGACTCCGTAAGTACACACCTGGTCCGATGTGTTTTAGTGGATATGTCTTGTTAGAGTACATGATTTGTTTTTTTGAATTGCATATTTGTAGGAATTTGAGGCACTTGAGAAAGAAATTGAAACGGTGTTCAAGCCTAAAGTGAGAGACATGCTCATGTCTCCTCACAGCAGCGACAAGGAGAGGATTCGTCTCATCCATTTGCTTATCAGCCTCGGTATCGCTTATTACTATGAGAATGAAATCGAGGAGATTTTACACAAGGCTTACGGGAAGTTGGCCTGCTTAATTTCGGACGAGGATGATTTGGAAACAATAGCAATCATGTTTGAGGTTTTCAGACTATATGGACACAAGATGCCTTGCGATGTGTTCGAGAGATTCAAAAGCGAAGATGGGAAGTTTAAGGAAAGTTTAGTTGGGGATGTTAGAGGGCTGCTACAGCTGTACGAAGCCGCGCATCTAGGAGCACCATCTGAAGATATAATGGATGAAGCCTTAAGTTTTGCGCGGTATCACTTGGAACCGTTGGCAGGCACCGAAACAAGCTCTAATCTTTTTAAGCATGTAGAAAACGTTTTGTATAGAGCTCGATATCATAGCATAGAGATACTAGTAGCACGACAGTACATCTCTTTCTATGATCAAGAAGAAGACCAAGATGAGACGCTCCTTAGGTTTTCAAAGCTCAATTTCAATTTTTGCCAGATGCATTACGTCAAAGAGCTCAAAATTGTCACTAGATGGTGGAAGGAGCTAGGTATCGCATCTAAGCTACCGTACTCCATAAGGGAGCGAAATGTGGAGACTTATCTTGGGGGCTTGGGAGTGCTTTTCGAGCCGCGATATTCACTTGCAAGAATTTTCTTAGCTAAACTAACACTGATCATGACTGTTGTGGATGATACATGTGATGCATATGCCACTCTTCCTGAAGTTCAGAGTCTTCATGATGCTTTTCATAGATGGGATCTGCGTGCCATGGAAGAACTACCGAGGTATATGAGAATCATCTACCAAAGTGTGTTCGAGACTGTGGAAGATATTGATCGAGAAATGATAGCTCGAGGAAAACATGGTCGGTTGCAACTAACCATAGATGAGATCAAGAGTCTGATGATATGGTATCTTGGGATAGCAAAATGGGCACGCTCAGATCAAGTGCCAAGCTTTGAGGATTACATGGAGATTGGGACACCCTCGTCTGCATTGGATGACTTTGCATCCTACGGCTTTATAGCAATGGACGATTGTGATCAGAAGCAATTGAAGGAATGGTTTTACTCCAAACCTAAAATCTTTCATGCCTTGAATGCTCTGTTTCGTATCAGAAATGACATTGTCACGTTCGAGCAAGAGATGAGCAGAGGAGAGGTGGCAAATGGTGTCAACTGTTACATGAAGCAACATGGTGTCACCAAAGAAGCAGCGGTTGAAGAACTGAGGAAGATGGAAAGAGAGAGTTATAAGATAATGATTGAGGAGTTCATGACGTCCAAAGCTATGCCACGACAGATTCTGGTGCGACCCGTCAACATTGCGCGTGTAATGGATTTGTTTTACAAAGAAGCCGATGGATTTGGGCATCCTGATCAAAAGCTCTTACAACTTATTGCGTCTTTGTTCCTCCATCCAATACCTCTTTGAACATTTATAAAAAGTTATATAAGGAGTTTTTATATATGTATGTGACTTTGAATAAGTGTTTTGTATATGTTTACTTTGAATTTGAATTTTCTTTAATTTATTTTACCAAACCGTTATAACTTTTAATATATTTGATATTAATA
CDS Sequence
- >AT3G29410.2
ATGCTCATGTCTCCTCACAGCAGCGACAAGGAGAGGATTCGTCTCATCCATTTGCTTATCAGCCTCGGTATCGCTTATTACTATGAGAATGAAATCGAGGAGATTTTACACAAGGCTTACGGGAAGTTGGCCTGCTTAATTTCGGACGAGGATGATTTGGAAACAATAGCAATCATGTTTGAGGTTTTCAGACTATATGGACACAAGATGCCTTGCGATGTGTTCGAGAGATTCAAAAGCGAAGATGGGAAGTTTAAGGAAAGTTTAGTTGGGGATGTTAGAGGGCTGCTACAGCTGTACGAAGCCGCGCATCTAGGAGCACCATCTGAAGATATAATGGATGAAGCCTTAAGTTTTGCGCGGTATCACTTGGAACCGTTGGCAGGCACCGAAACAAGCTCTAATCTTTTTAAGCATGTAGAAAACGTTTTGTATAGAGCTCGATATCATAGCATAGAGATACTAGTAGCACGACAGTACATCTCTTTCTATGATCAAGAAGAAGACCAAGATGAGACGCTCCTTAGGTTTTCAAAGCTCAATTTCAATTTTTGCCAGATGCATTACGTCAAAGAGCTCAAAATTGTCACTAGATGGTGGAAGGAGCTAGGTATCGCATCTAAGCTACCGTACTCCATAAGGGAGCGAAATGTGGAGACTTATCTTGGGGGCTTGGGAGTGCTTTTCGAGCCGCGATATTCACTTGCAAGAATTTTCTTAGCTAAACTAACACTGATCATGACTGTTGTGGATGATACATGTGATGCATATGCCACTCTTCCTGAAGTTCAGAGTCTTCATGATGCTTTTCATAGATGGGATCTGCGTGCCATGGAAGAACTACCGAGGTATATGAGAATCATCTACCAAAGTGTGTTCGAGACTGTGGAAGATATTGATCGAGAAATGATAGCTCGAGGAAAACATGGTCGGTTGCAACTAACCATAGATGAGATCAAGAGTCTGATGATATGGTATCTTGGGATAGCAAAATGGGCACGCTCAGATCAAGTGCCAAGCTTTGAGGATTACATGGAGATTGGGACACCCTCGTCTGCATTGGATGACTTTGCATCCTACGGCTTTATAGCAATGGACGATTGTGATCAGAAGCAATTGAAGGAATGGTTTTACTCCAAACCTAAAATCTTTCATGCCTTGAATGCTCTGTTTCGTATCAGAAATGACATTGTCACGTTCGAGCAAGAGATGAGCAGAGGAGAGGTGGCAAATGGTGTCAACTGTTACATGAAGCAACATGGTGTCACCAAAGAAGCAGCGGTTGAAGAACTGAGGAAGATGGAAAGAGAGAGTTATAAGATAATGATTGAGGAGTTCATGACGTCCAAAGCTATGCCACGACAGATTCTGGTGCGACCCGTCAACATTGCGCGTGTAATGGATTTGTTTTACAAAGAAGCCGATGGATTTGGGCATCCTGATCAAAAGCTCTTACAACTTATTGCGTCTTTGTTCCTCCATCCAATACCTCTTTGA - >AT3G29410.1
ATGCTCATGTCTCCTCACAGCAGCGACAAGGAGAGGATTCGTCTCATCCATTTGCTTATCAGCCTCGGTATCGCTTATTACTATGAGAATGAAATCGAGGAGATTTTACACAAGGCTTACGGGAAGTTGGCCTGCTTAATTTCGGACGAGGATGATTTGGAAACAATAGCAATCATGTTTGAGGTTTTCAGACTATATGGACACAAGATGCCTTGCGATGTGTTCGAGAGATTCAAAAGCGAAGATGGGAAGTTTAAGGAAAGTTTAGTTGGGGATGTTAGAGGGCTGCTACAGCTGTACGAAGCCGCGCATCTAGGAGCACCATCTGAAGATATAATGGATGAAGCCTTAAGTTTTGCGCGGTATCACTTGGAACCGTTGGCAGGCACCGAAACAAGCTCTAATCTTTTTAAGCATGTAGAAAACGTTTTGTATAGAGCTCGATATCATAGCATAGAGATACTAGTAGCACGACAGTACATCTCTTTCTATGATCAAGAAGAAGACCAAGATGAGACGCTCCTTAGGTTTTCAAAGCTCAATTTCAATTTTTGCCAGATGCATTACGTCAAAGAGCTCAAAATTGTCACTAGATGGTGGAAGGAGCTAGGTATCGCATCTAAGCTACCGTACTCCATAAGGGAGCGAAATGTGGAGACTTATCTTGGGGGCTTGGGAGTGCTTTTCGAGCCGCGATATTCACTTGCAAGAATTTTCTTAGCTAAACTAACACTGATCATGACTGTTGTGGATGATACATGTGATGCATATGCCACTCTTCCTGAAGTTCAGAGTCTTCATGATGCTTTTCATAGATGGGATCTGCGTGCCATGGAAGAACTACCGAGGTATATGAGAATCATCTACCAAAGTGTGTTCGAGACTGTGGAAGATATTGATCGAGAAATGATAGCTCGAGGAAAACATGGTCGGTTGCAACTAACCATAGATGAGATCAAGAGTCTGATGATATGGTATCTTGGGATAGCAAAATGGGCACGCTCAGATCAAGTGCCAAGCTTTGAGGATTACATGGAGATTGGGACACCCTCGTCTGCATTGGATGACTTTGCATCCTACGGCTTTATAGCAATGGACGATTGTGATCAGAAGCAATTGAAGGAATGGTTTTACTCCAAACCTAAAATCTTTCATGCCTTGAATGCTCTGTTTCGTATCAGAAATGACATTGTCACGTTCGAGCAAGAGATGAGCAGAGGAGAGGTGGCAAATGGTGTCAACTGTTACATGAAGCAACATGGTGTCACCAAAGAAGCAGCGGTTGAAGAACTGAGGAAGATGGAAAGAGAGAGTTATAAGATAATGATTGAGGAGTTCATGACGTCCAAAGCTATGCCACGACAGATTCTGGTGCGACCCGTCAACATTGCGCGTGTAATGGATTTGTTTTACAAAGAAGCCGATGGATTTGGGCATCCTGATCAAAAGCTCTTACAACTTATTGCGTCTTTGTTCCTCCATCCAATACCTCTTTGA
Protein Sequence
- >AT3G29410.2
MLMSPHSSDKERIRLIHLLISLGIAYYYENEIEEILHKAYGKLACLISDEDDLETIAIMFEVFRLYGHKMPCDVFERFKSEDGKFKESLVGDVRGLLQLYEAAHLGAPSEDIMDEALSFARYHLEPLAGTETSSNLFKHVENVLYRARYHSIEILVARQYISFYDQEEDQDETLLRFSKLNFNFCQMHYVKELKIVTRWWKELGIASKLPYSIRERNVETYLGGLGVLFEPRYSLARIFLAKLTLIMTVVDDTCDAYATLPEVQSLHDAFHRWDLRAMEELPRYMRIIYQSVFETVEDIDREMIARGKHGRLQLTIDEIKSLMIWYLGIAKWARSDQVPSFEDYMEIGTPSSALDDFASYGFIAMDDCDQKQLKEWFYSKPKIFHALNALFRIRNDIVTFEQEMSRGEVANGVNCYMKQHGVTKEAAVEELRKMERESYKIMIEEFMTSKAMPRQILVRPVNIARVMDLFYKEADGFGHPDQKLLQLIASLFLHPIPL - >AT3G29410.1
MLMSPHSSDKERIRLIHLLISLGIAYYYENEIEEILHKAYGKLACLISDEDDLETIAIMFEVFRLYGHKMPCDVFERFKSEDGKFKESLVGDVRGLLQLYEAAHLGAPSEDIMDEALSFARYHLEPLAGTETSSNLFKHVENVLYRARYHSIEILVARQYISFYDQEEDQDETLLRFSKLNFNFCQMHYVKELKIVTRWWKELGIASKLPYSIRERNVETYLGGLGVLFEPRYSLARIFLAKLTLIMTVVDDTCDAYATLPEVQSLHDAFHRWDLRAMEELPRYMRIIYQSVFETVEDIDREMIARGKHGRLQLTIDEIKSLMIWYLGIAKWARSDQVPSFEDYMEIGTPSSALDDFASYGFIAMDDCDQKQLKEWFYSKPKIFHALNALFRIRNDIVTFEQEMSRGEVANGVNCYMKQHGVTKEAAVEELRKMERESYKIMIEEFMTSKAMPRQILVRPVNIARVMDLFYKEADGFGHPDQKLLQLIASLFLHPIPL