Gene Details:
- Gene ID: AT3G29200
- Gene Symbol: ATCM1, CM1
- Gene Name: ARABIDOPSIS THALIANA CHORISMATE MUTASE 1, chorismate mutase 1
- Description: chorismate mutase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- From sequence analysis of three novel ascorbate peroxidases from Arabidopsis thaliana to structure, function and evolution of seven types of ascorbate peroxidase. DOI: 10.1042/bj3260305 ; PMID: 9291097
- Cytosolic and plastidic chorismate mutase isozymes from Arabidopsis thaliana: molecular characterization and enzymatic properties. DOI: 10.1046/j.1365-313x.1996.10050815.x ; PMID: 8953244
- Cloning and expression in yeast of a higher plant chorismate mutase. Molecular cloning, sequencing of the cDNA and characterization of the Arabidopsis thaliana enzyme expressed in yeast. DOI: 10.1016/0014-5793(93)81718-f ; PMID: 8224252
- Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. DOI: 10.1093/aob/mcf104 ; PMID: 12102506
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Arabidopsis isochorismate synthase functional in pathogen-induced salicylate biosynthesis exhibits properties consistent with a role in diverse stress responses. DOI: 10.1074/jbc.M605193200 ; PMID: 17190832
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. DOI: 10.1104/pp.107.098293 ; PMID: 17478635
- Principal transcriptional programs regulating plant amino acid metabolism in response to abiotic stresses. DOI: 10.1104/pp.108.115733 ; PMID: 18375600
- A search for factors influencing etioplast-chloroplast transition. DOI: 10.1073/pnas.0902145106 ; PMID: 19567834
- Structural evolution of differential amino acid effector regulation in plant chorismate mutases. DOI: 10.1074/jbc.M114.591123 ; PMID: 25160622
- Evolution of allosteric regulation in chorismate mutases from early plants. DOI: 10.1042/BCJ20170549 ; PMID: 28963347
- Cloning and expression in yeast of a higher plant chorismate mutase. Molecular cloning, sequencing of the cDNA and characterization of the Arabidopsis thaliana enzyme expressed in yeast. DOI: 10.1016/0014-5793(93)81718-f ; PMID: 8224252
Sequences:
cDNA Sequence
- >AT3G29200.1
CTTTCGTGGGCTAAAGACGTGCACGCAGACACAACCCTACACATCTCTCCCTCTCTCACCAACTCTTTCTCTTTACCCACTGCACCTACCCCCAAACAATCCCTTTTAACATCTCTCATTCCTCTGCTCATGATTCTTTGTCTCTTCCTCTGATTTCTCAATCCTCTGTTTTCTCCGTCTCCTCTGTTTTTTTCACATCAATGGAAGCGTCATTGTTGATGAGATCGTCTTGTTGCTCCTCTGCGATTGGTGGGTTCTTCGACCATCGACGTGAATTATCAACCTCAACACCCATTTCCACTCTTCTTCCTCTTCCATCAACCAAATCTTCTTTCTCTGTTCGTTGTTCTCTTCCTCAGCCATCAAAGCCACGCTCTGGAACCAGCTCTGTTCACGCCGTTATGACACTCGCTGGATCGTTGACAGGGAAGAAACGAGTGGATGAGAGTGAGAGTTTGACTCTTGAAGGTATTAGAAACTCTTTGATCCGTCAAGAGGACAGCATTATATTTGGGCTATTGGAGAGAGCCAAGTACTGTTACAATGCTGATACTTATGATCCTACTGCTTTTGACATGGATGGTTTCAATGGTTCTTTGGTTGAGTACATGGTTAAAGGCACTGAGAAGCTTCACGCTAAGGTTGGTAGGTTTAAGAGTCCTGATGAACATCCTTTCTTCCCTGATGATCTACCAGAGCCTATGTTGCCTCCTCTTCAGTACCCAAAGGTGTTGCATTTTGCTGCTGATTCGATAAACATAAACAAGAAGATATGGAACATGTACTTCAGAGACCTTGTTCCAAGACTTGTGAAGAAAGGCGATGATGGTAACTACGGCTCAACAGCTGTCTGTGACGCTATCTGCCTTCAGTGTCTCTCAAAGAGAATCCATTACGGTAAATTTGTTGCAGAAGCTAAATTTCAAGCCTCACCCGAAGCATACGAGTCCGCCATCAAAGCACAAGATAAGGATGCACTGATGGATATGCTGACATTCCCGACTGTGGAAGATGCGATAAAGAAGAGAGTTGAGATGAAAACCCGAACATACGGGCAAGAAGTGAAAGTTGGGATGGAGGAGAAAGAAGAAGAAGAAGAAGAAGGGAATGAATCTCATGTTTACAAAATCAGTCCGATCTTAGTTGGTGACTTATATGGAGATTGGATCATGCCTTTAACAAAAGAGGTTCAAGTGGAGTACTTGCTCAGAAGACTGGACTGAGGCAACAACAAAATAAACAATATGGCTTTGGTAGTAGAGTAGAAAGGTTTTTGAATGTTCTTTGGTTTTTTTTTTTACTTTACAATATTTCTAAACGTTGTTACACTATTATTCCACTGTACAAAGCGTGCATGGTCAGTGGTATTGAAGAAGGGTAATTAGCCGTTACTCAAACGGTGTCGTTTATGTACATACTCTCAATTGTGGAAACCTGTATATGAGTTTTAGTCGCTCTTATTTGTTTTGGAGATGTATTTTTTTGTGTGTTAGTGCCTGTAGAATGATAATTGGCTGCTTAGTGTAGTGGTCACCACTGGTTATATGGAGTTTGACTCGTCTCACATGGAGTCCGACTCCATCCATTGTAAAAGTGGAAATGGGTCACTAGGAGAGAGCCTTCTCGTCATCCTCCTGTGTTAACTTACAAGGAAAGAGCCTTCTAGTCATCCTCCTGTGTAAAGGAGAGAACCTTTACGTATTTTGTTCGGGTATGTTAACCTTCTTCCTCTGCCTCATTACCAAAATTCCTTATGTGAGGGCCAGAAGAGATCTATTTTTCCATCCTCCTTTTCGATGGGGAGAATTTGCCCACCATTATTTTAGGTCTCTATATTGTGATGTTGCTGAGTTGTAATATCATACGCAATTGTATTAGCAATCTTGTTTTAGTGGAATTGTTTCTAGTCTAGGTCCTGAGGATGTAGGTTGTTACCAAACCCCGTTAACAAATCTCTGCTTTTATG
CDS Sequence
- >AT3G29200.1
ATGGAAGCGTCATTGTTGATGAGATCGTCTTGTTGCTCCTCTGCGATTGGTGGGTTCTTCGACCATCGACGTGAATTATCAACCTCAACACCCATTTCCACTCTTCTTCCTCTTCCATCAACCAAATCTTCTTTCTCTGTTCGTTGTTCTCTTCCTCAGCCATCAAAGCCACGCTCTGGAACCAGCTCTGTTCACGCCGTTATGACACTCGCTGGATCGTTGACAGGGAAGAAACGAGTGGATGAGAGTGAGAGTTTGACTCTTGAAGGTATTAGAAACTCTTTGATCCGTCAAGAGGACAGCATTATATTTGGGCTATTGGAGAGAGCCAAGTACTGTTACAATGCTGATACTTATGATCCTACTGCTTTTGACATGGATGGTTTCAATGGTTCTTTGGTTGAGTACATGGTTAAAGGCACTGAGAAGCTTCACGCTAAGGTTGGTAGGTTTAAGAGTCCTGATGAACATCCTTTCTTCCCTGATGATCTACCAGAGCCTATGTTGCCTCCTCTTCAGTACCCAAAGGTGTTGCATTTTGCTGCTGATTCGATAAACATAAACAAGAAGATATGGAACATGTACTTCAGAGACCTTGTTCCAAGACTTGTGAAGAAAGGCGATGATGGTAACTACGGCTCAACAGCTGTCTGTGACGCTATCTGCCTTCAGTGTCTCTCAAAGAGAATCCATTACGGTAAATTTGTTGCAGAAGCTAAATTTCAAGCCTCACCCGAAGCATACGAGTCCGCCATCAAAGCACAAGATAAGGATGCACTGATGGATATGCTGACATTCCCGACTGTGGAAGATGCGATAAAGAAGAGAGTTGAGATGAAAACCCGAACATACGGGCAAGAAGTGAAAGTTGGGATGGAGGAGAAAGAAGAAGAAGAAGAAGAAGGGAATGAATCTCATGTTTACAAAATCAGTCCGATCTTAGTTGGTGACTTATATGGAGATTGGATCATGCCTTTAACAAAAGAGGTTCAAGTGGAGTACTTGCTCAGAAGACTGGACTGA
Protein Sequence
- >AT3G29200.1
MEASLLMRSSCCSSAIGGFFDHRRELSTSTPISTLLPLPSTKSSFSVRCSLPQPSKPRSGTSSVHAVMTLAGSLTGKKRVDESESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNGSLVEYMVKGTEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD