Information report for AT3G29035
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000258 — root cortex — cortex de la raíz (Spanish, exact), portion of root cortex tissue (exact), 根皮層 (Japanese, exact)
- PO:0003015 — primary root differentiation zone — zona de diferenciación de la raíz primary (Spanish, exact), 一次根分化帯（層） (Japanese, exact)
- PO:0005679 — plant epidermis — dermal tissue (exact), epidermal layer (exact), epidermides (exact, plural), epidermis (Spanish, exact), epidermises (exact, plural), portion of epidermal tissue (exact), 表皮 (Japanese, exact), multiseriate epidermis (related)
- PO:0025257 — primary root elongation zone — zona de elongación de la raíz primaria (Spanish, exact), 一次根伸長帯（層） (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DOI: 10.1093/dnares/10.6.239 ; PMID: 15029955
- Overexpression of spermidine synthase enhances tolerance to multiple environmental stresses and up-regulates the expression of various stress-regulated genes in transgenic Arabidopsis thaliana. DOI: 10.1093/pcp/pch083 ; PMID: 15215506
- MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. DOI: 10.1016/j.cub.2004.06.022 ; PMID: 15202996
- Reversible histone acetylation and deacetylation mediate genome-wide, promoter-dependent and locus-specific changes in gene expression during plant development. DOI: 10.1534/genetics.104.033142 ; PMID: 15371352
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. DOI: 10.1073/pnas.0510607103 ; PMID: 16581911
- Quantification of transcription factor expression from Arabidopsis images. DOI: 10.1093/bioinformatics/btl228 ; PMID: 16873489
- Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments. DOI: 10.1186/1471-2164-8-112 ; PMID: 17474978
- Mutation of the Arabidopsis NAC016 transcription factor delays leaf senescence. DOI: 10.1093/pcp/pct113 ; PMID: 23926065
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Gene regulatory cascade of senescence-associated NAC transcription factors activated by ETHYLENE-INSENSITIVE2-mediated leaf senescence signalling in Arabidopsis. DOI: 10.1093/jxb/eru112 ; PMID: 24659488
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in Arabidopsis. DOI: 10.1371/journal.pgen.1008068 ; PMID: 30969965
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. DOI: 10.1073/pnas.0510607103 ; PMID: 16581911
Gene Resources
Homologs
- Brassica napus BnaA09G0043700ZS, GSBRNA2T00009829001, BnaC07G0317900ZS, GSBRNA2T00142881001, BnaA06G0373600ZS
- Brassica oleracea XP_013609231.1, Bo9g008770, XP_013595617.1, Bo7g087220
- Brassica rapa XP_009111778.1, Bra036223
- Raphanus raphanistrum RrC3365_p1
Sequences
cDNA Sequence
- >AT3G29035.1
AAACTAGTATAAGAGCTTGGTTGCTCAAACCATTTTCTCTTCTCTCTGAAAAGAAACTCAACTTTTTTTCTTTATCTTTAACATCAAAAAACTTTTTCGATATCTTTACAACCATTAAACAAAAAATTTGGCCACTACAAGTTGAAAAAGTTTTGATTATATCTAATCGCTGAAATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTGATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTGGGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACTAAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAATCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAGCTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGTTATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGAGGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATTTTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGTACTGAAGATGTTGCTTGACAATGAAGAAACCCAATTTAAGAAGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGTCACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTCTGAATTTGGAAAATCGAAAATTTGGATGTTAACTAGGGGGTATATAGGGTTTTTAAAAACAGTGTATATATGCGTTATGTGTTAGCTTTAGATTCTAGGATATACAAAGATGACACTAATAGATTCTTATAACATTTTGTAAAAAAAAATCATTGTAGTGAATACTCTCTTGCCATTTGAAATCCATTGTGTTTGCATATTTAAGGTGTTCATAAATTGTCATGCTGAATTGTGTTTGCATATTCTCATTATTTCCCTGTTTGTAATTAATGATTGTAACATACCTAAGTAGATAATATTAGATT
CDS Sequence
- >AT3G29035.1
ATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTGATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTGGGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACTAAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAATCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAGCTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGTTATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGAGGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATTTTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGTACTGAAGATGTTGCTTGACAATGAAGAAACCCAATTTAAGAAGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGTCACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTCTGA
Protein Sequence
- >AT3G29035.1
MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTKEHMSVGLPPLMDSSPYLKSRGQDSLAGTTLGGLLSHVTYFSDQTTDDKSLVADFKTTMFGSGSTNFLPNIGSLLDFDPLFLQNNSSVLKMLLDNEETQFKKNLHNSGSSESELTASSWQGHNSYGSTGPVNLDCVWKF