Information report for AT3G28930
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
- shoot axis apex , leaf lamina base , shoot system , vascular leaf , stamen , sepal , flower , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature and News
- Isolation of Arabidopsis genes that differentiate between resistance responses mediated by the RPS2 and RPM1 disease resistance genes. DOI: 10.1105/tpc.8.2.241 ; PMID: 8742710
- Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. DOI: 10.1093/aob/mcf104 ; PMID: 12102506
- Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. DOI: 10.1046/j.1365-313x.2003.01625.x ; PMID: 12535341
- Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. DOI: 10.1104/pp.103.020941 ; PMID: 12805589
- Trehalose mediated growth inhibition of Arabidopsis seedlings is due to trehalose-6-phosphate accumulation. DOI: 10.1104/pp.104.039503 ; PMID: 15181209
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Phytotoxicity and innate immune responses induced by Nep1-like proteins. DOI: 10.1105/tpc.106.044180 ; PMID: 17194768
- A high-performance, small-scale microarray for expression profiling of many samples in Arabidopsis-pathogen studies. DOI: 10.1111/j.1365-313X.2006.02972.x ; PMID: 17181774
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- IAN/GIMAPs are conserved and novel regulators in vertebrates and angiosperm plants. DOI: 10.4161/psb.4.3.7722 ; PMID: 19721741
- AIG2A and AIG2B limit the activation of salicylic acid-regulated defenses by tryptophan-derived secondary metabolism in Arabidopsis. DOI: 10.1093/plcell/koac255 ; PMID: 35972413
- The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense. DOI: 10.1104/pp.108.117523 ; PMID: 18467450
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XGM9
- EMBL: CACSHJ010000089
- AlphaFoldDB: A0A5S9XGM9
- EnsemblPlants: AT3G28930.1, AT3G28930.3
- Gramene: AT3G28930.1, AT3G28930.3
- KEGG: ath:AT3G28930
- Orthologous matrix: ECVPVMV
- ExpressionAtlas: AT3G28930
- InterPro: IPR009288, IPR013024, IPR036568
- PANTHER: PTHR31544, PTHR31544:SF12
- SUPFAM: SSF110857
- Gene3D: 3.10.490.10, 6.10.250.210
- OrthoDB: A0A5S9XGM9
- SWISS-MODEL: A0A5S9XGM9
- Conserved Domain Database: cd06661
Sequences
cDNA Sequence
- >AT3G28930.3
AAAATCTTTCCAAACCGTTGAGGAGTAGGGGCATGAGAAGAACAAATGGGCCTTTATAACAAAAAGCCAATGAGAAAAGTCTGAAGGAAGAGAATCGTCAACAAACGATGGCTATACAACAAGAATAAATACATCACATTTTTCAGACAAACTCCAATTTCACAGTGAAAATAAAAACAATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGAAGAAGTTGTTTGCGTTTTATCTATCTTTTATGTCTTCTTGTTTCATATATCAAGGTGCTGCTAATAAAAGGGTCTTTACTTTCAAAGACAAAATAAGAAAGGCTTTGTTTTTGAGTATTTGAGAATAATGCATTTTATGTTTGGTGCATTTTGTCTTCTTAAGAACAAGTTTGATTTTAGTCCAAAAGAAGTTTTATTGGTTTGAAA - >AT3G28930.2
AAAATCTTTCCAAACCGTTGAGGAGTAGGGGCATGAGAAGAACAAATGGGCCTTTATAACAAAAAGCCAATGAGAAAAGTCTGAAGGAAGAGAATCGTCAACAAACGATGGCTATACAACAAGAATAAATACATCACATTTTTCAGACAAACTCCAATTTCACAGTGAAAATAAAAACAATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGAAGAAGTTGTTTGCGTTTTATCTATCTTTTATGTCTTCTTGTTTCATATATCAAGGTGCTGCTAATAAAAGGGTCTTTACTTTCAAAGACAAAATAAGAAAGGCTTTGTTTTTGAGTATTTGAGAATAATGCATTTTATGTTTGGTGCATTTTGTCTTCTTAAGAACAAGTTTGATTTTAGTCCAAAAGAAGTTTTATTGGTTTGAAA - >AT3G28930.1
AAAATCTTTCCAAACCGTTGAGGAGTAGGGGCATGAGAAGAACAAATGGGCCTTTATAACAAAAAGCCAATGAGAAAAGTCTGAAGGAAGAGAATCGTCAACAAACGATGGCTATACAACAAGAATAAATACATCACATTTTTCAGACAAACTCCAATTTCACAGTGAAAATAAAAACAATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGAAGAAGTTGTTTGCGTTTTATCTATCTTTTATGTCTTCTTGTTTCATATATCAAGGTGCTGCTAATAAAAGGGTCTTTACTTTCAAAGACAAAATAAGAAAGGCTTTGTTTTTGAGTATTTGAGAATAATGCATTTTATGTTTGGTGCATTTTGTCTTCTTAAGAACAAGTTTGATTTTAGTCCAAAAGAAGTTTTATTGGTTTGAAA
CDS Sequence
- >AT3G28930.3
ATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGA - >AT3G28930.2
ATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGA - >AT3G28930.1
ATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGAACCAGCCGTTGTTAATTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCCACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACAATGGATTAATCAATGGCAAGATACTAACTGGATTAACAGATTCTCAGTTAGAGAGTTTAGATATGATTGAAGGAACTGAATATGTGAGGAAGACTGTTGAAGTTGTTTTGACTGATACTTTGGAGAAGAAGCAAGTTGAAACAATTGTATGGGCAAACAAGGATGATCCTAATATGTATGGAGAATGGGATTTCGAGGAATGGAAGAGGCTTCATATGGAGAAATTTATAGAGGCGGCGACGAAATTCATGGAGTGGAAGAAGAATCCGAATGGGAGAAGTAGGGAAGAGTTTGAGAAGTTTGTACAAGATGATTCTTCTCCGGCTTCGGCTTGA
Protein Sequence
- >AT3G28930.3
MTSSDQSPSHDVFVYGSFQEPAVVNLILECAPVMVSAQLHGYHLYRLKGRLHPCISPSDNGLINGKILTGLTDSQLESLDMIEGTEYVRKTVEVVLTDTLEKKQVETIVWANKDDPNMYGEWDFEEWKRLHMEKFIEAATKFMEWKKNPNGRSREEFEKFVQDDSSPASA - >AT3G28930.2
MTSSDQSPSHDVFVYGSFQEPAVVNLILECAPVMVSAQLHGYHLYRLKGRLHPCISPSDNGLINGKILTGLTDSQLESLDMIEGTEYVRKTVEVVLTDTLEKKQVETIVWANKDDPNMYGEWDFEEWKRLHMEKFIEAATKFMEWKKNPNGRSREEFEKFVQDDSSPASA - >AT3G28930.1
MTSSDQSPSHDVFVYGSFQEPAVVNLILECAPVMVSAQLHGYHLYRLKGRLHPCISPSDNGLINGKILTGLTDSQLESLDMIEGTEYVRKTVEVVLTDTLEKKQVETIVWANKDDPNMYGEWDFEEWKRLHMEKFIEAATKFMEWKKNPNGRSREEFEKFVQDDSSPASA