Information report for AT3G28910
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000263 — non-hair root epidermal cell — atrichoblast (exact), atricoblasto (Spanish, exact), 非毛根形成細胞、アトリコブラスト (Japanese, exact), non-hair cell (broad)
Functional Keywords
Literature and News
- Functional identification of an Arabidopsis snf4 ortholog by screening for heterologous multicopy suppressors of snf4 deficiency in yeast. DOI: 10.1046/j.1365-313x.2000.00809.x ; PMID: 10929106
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Arabidopsis MYB30 is a direct target of BES1 and cooperates with BES1 to regulate brassinosteroid-induced gene expression. DOI: 10.1111/j.1365-313X.2008.03778.x ; PMID: 19170933
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Sumoylation of transcription factor MYB30 by the small ubiquitin-like modifier E3 ligase SIZ1 mediates abscisic acid response in Arabidopsis thaliana. DOI: 10.1073/pnas.1202630109 ; PMID: 22814374
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Elevated levels of MYB30 in the phloem accelerate flowering in Arabidopsis through the regulation of FLOWERING LOCUS T. DOI: 10.1371/journal.pone.0089799 ; PMID: 24587042
- Arabidopsis acyl-CoA-binding protein ACBP3 participates in plant response to hypoxia by modulating very-long-chain fatty acid metabolism. DOI: 10.1111/tpj.12692 ; PMID: 25284079
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- A genetic framework for H2O2 induced cell death in Arabidopsis thaliana. DOI: 10.1186/s12864-015-1964-8 ; PMID: 26493993
- A non canonical subtilase attenuates the transcriptional activation of defence responses in Arabidopsis thaliana. DOI: 10.7554/eLife.19755 ; PMID: 27685353
- MYB30 transcription factor regulates oxidative and heat stress responses through ANNEXIN-mediated cytosolic calcium signaling in Arabidopsis. DOI: 10.1111/nph.14679 ; PMID: 28726305
- Arabidopsis small ubiquitin-related modifier protease ASP1 positively regulates abscisic acid signaling during early seedling development. DOI: 10.1111/jipb.12669 ; PMID: 29786952
- The Ubiquitin E3 Ligase RHA2b Promotes Degradation of MYB30 in Abscisic Acid Signaling. DOI: 10.1104/pp.18.00683 ; PMID: 30030326
- Nitric oxide responses in Arabidopsis hypocotyls are mediated by diverse phytohormone pathways. DOI: 10.1093/jxb/ery286 ; PMID: 30085082
- Arabidopsis HSP70-16 is required for flower opening under normal or mild heat stress temperatures. DOI: 10.1111/pce.13480 ; PMID: 30426513
- ANAC032 regulates root growth through the MYB30 gene regulatory network. DOI: 10.1038/s41598-019-47822-0 ; PMID: 31388054
- MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light. DOI: 10.1105/tpc.19.00645 ; PMID: 32371543
- PI4Kγ2 Interacts with E3 Ligase MIEL1 to Regulate Auxin Metabolism and Root Development. DOI: 10.1104/pp.20.00799 ; PMID: 32788299
- MYB30 and ETHYLENE INSENSITIVE3 antagonistically modulate root hair growth in Arabidopsis. DOI: 10.1111/tpj.15180 ; PMID: 33529413
- MYB30 and ETHYLENE INSENEITIVE3 antagonistically regulate root hair growth and phosphorus uptake under phosphate deficiency in Arabidopsis. DOI: 10.1080/15592324.2021.1913310 ; PMID: 33853500
- The MIEL1-ABI5/MYB30 regulatory module fine tunes abscisic acid signaling during seed germination. DOI: 10.1111/jipb.13234 ; PMID: 35167730
- MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery. DOI: 10.1111/nph.18674 ; PMID: 36513604
- MIW1 participates in ABA signaling through the regulation of MYB30 in Arabidopsis. DOI: 10.1016/j.plantsci.2023.111717 ; PMID: 37105379
- Functional identification of an Arabidopsis snf4 ortholog by screening for heterologous multicopy suppressors of snf4 deficiency in yeast. DOI: 10.1046/j.1365-313x.2000.00809.x ; PMID: 10929106
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis. DOI: 10.1105/tpc.107.054858 ; PMID: 18326828
Gene Resources
- UniProt: A0A654FBL8
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654FBL8
- EnsemblPlants: AT3G28910.1
- Gramene: AT3G28910.1
- KEGG: ath:AT3G28910
- Orthologous matrix: INLACAG
- ExpressionAtlas: AT3G28910
- InterPro: IPR001005, IPR009057, IPR015495
- PANTHER: PTHR10641, PTHR10641:SF1063
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A654FBL8
- Conserved Domain Database: cd00167
Homologs
- Brassica napus BnaC02G0472600ZS, GSBRNA2T00144540001, BnaC07G0316500ZS
- Brassica oleracea XP_013616367.1, Bo2g146540, XP_013618791.1, XP_013598512.1, Bo7g087050, Bo1g090540
- Brassica rapa XP_009151834.1
Sequences
cDNA Sequence
- >AT3G28910.1
CTTTTATTTATTATCTATACAATTTGAGAGACCCAAGAGTCCAAGACCAAGAGGGGTCAGCAAATTTCTCTTTCTCCTTTTATATATATATATAGAAGAAGAAGTGGACATAGACCTTTGTCGCCAAGCTTAACCATTAGATCCATTTCAGAGCTAAGCGTACTAATTAGTGTACTAAGGGTAGTGTGACTCATTACCACCTAAAGTAGTTTCAATTTTCTTCTATTTTTCTTGGCAAAGAGTTATAGTGGGAAACAAAGGGAGTGGTTAATAAAGAATTAATTAGTTAATTAAGGGAGTTCAAGATCATAATGGTGAGGCCTCCTTGTTGTGACAAAGGAGGAGTGAAGAAAGGGCCATGGACTCCTGAAGAAGATATCATTTTAGTCACTTACATCCAAGAACATGGTCCTGGTAATTGGAGAGCTGTTCCTACCAATACTGGGCTGCTTAGATGCAGCAAGAGTTGTAGACTTAGATGGACAAACTATTTAAGGCCAGGAATCAAAAGAGGCAATTTCACAGAACATGAAGAAAAGATGATTGTTCATCTCCAAGCCCTCTTAGGAAATAGATGGGCTGCAATTGCGTCATATCTTCCACAAAGGACAGACAATGACATTAAGAACTATTGGAACACTCATTTGAAGAAGAAACTCAACAAAGTCAATCAAGATTCTCATCAAGAACTTGACCGTTCCTCGCTCTCATCTTCACCATCGTCTTCTTCTGCTAATTCCAACTCAAACATCTCAAGAGGCCAATGGGAAAGGCGACTTCAAACCGATATCCACTTGGCGAAAAAGGCTCTCTCTGAGGCTTTATCTCCTGCCGTTGCACCAATCATTACATCTACAGTGACAACAACGTCTTCCTCTGCTGAATCAAGACGCTCTACTTCCTCAGCTAGCGGGTTTCTTAGGACGCAAGAAACATCTACAACTTATGCCTCAAGCACCGAAAATATCGCGAAATTGCTCAAAGGGTGGGTGAAAAACTCGCCGAAGACTCAAAACTCCGCGGATCAAATCGCTTCTACAGAGGTAAAAGAAGTGATCAAGAGTGATGATGGGAAGGAGTGTGCAGGGGCATTTCAGTCATTTTCTGAGTTTGATCACTCATATCAACAGGCTGGTGTTTCACCTGATCATGAGACCAAACCAGACATAACTGGATGCTGCAGTAACCAAAGTCAATGGTCTTTGTTTGAGAAGTGGTTGTTTGAGGATTCTGGTGGACAGATTGGTGATATTCTATTGGATGAAAACACTAATTTCTTCTGAAGAGTTTGCTTTAATCACATGGTTCTAATTTTAGGATCCTCATCTCTATTTTTTTTTTTGGGTTTTCCAAATTAACTCGCTTAGATTATCGTGAGATAAATCAGTAATAATTTTATTTATTTTCCCTCTTTAATTTACAATTAATGATGGGGTTGTTTTATATATGGCCCTGTGAATTCTGAAGGGGCCTGAAAAATGTCCACCCAATGATTTTAGTAGTATTGGTGTAAAATCCTATATCTATTTTTTATTTATTAAAATGTTGTTATTGCTTGATTTTTCTTTTGCTTTGTAACTTGTAAGTATGATTTACTTTTGAGATGTTAACCTAAAA - >AT3G28910.2
CTTTTATTTATTATCTATACAATTTGAGAGACCCAAGAGTCCAAGACCAAGAGGGGTCAGCAAATTTCTCTTTCTCCTTTTATATATATATATAGAAGAAGAAGTGGACATAGACCTTTGTCGCCAAGCTTAACCATTAGATCCATTTCAGAGCTAAGCGTACTAATTAGTGTACTAAGGGTAGTGTGACTCATTACCACCTAAAGTAGTTTCAATTTTCTTCTATTTTTCTTGGCAAAGAGTTATAGTGGGAAACAAAGGGAGTGGTTAATAAAGAATTAATTAGTTAATTAAGGGAGTTCAAGATCATAATGGTGAGGCCTCCTTGTTGTGACAAAGGAGGAGTGAAGAAAGGGCCATGGACTCCTGAAGAAGATATCATTTTAGTCACTTACATCCAAGAACATGGTCCTGGTAATTGGAGAGCTGTTCCTACCAATACTGGGCTGCTTAGATGCAGCAAGAGTTGTAGACTTAGATGGACAAACTATTTAAGGCCAGGAATCAAAAGAGGCAATTTCACAGAACATGAAGAAAAGATGATTGTTCATCTCCAAGCCCTCTTAGGAAATAGATGGGCTGCAATTGCGTCATATCTTCCACAAAGGACAGACAATGACATTAAGAACTATTGGAACACTCATTTGAAGAAGAAACTCAACAAAGTCAATCAAGATTCTCATCAAGAACTTGACCGTTCCTCGCTCTCATCTTCACCATCGTCTTCTTCTGCTAATTCCAACTCAAACATCTCAAGAGGCCAATGGGAAAGGCGACTTCAAACCGATATCCACTTGGCGAAAAAGGCTCTCTCTGAGGCTTTATCTCCTGCCGTTGCACCAATCATTACATCTACAGTGACAACAACGTCTTCCTCTGCTGAATCAAGACGCTCTACTTCCTCAGCTAGCGGGTTTCTTAGGACGCAAGAAACATCTACAACTTATGCCTCAAGCACCGAAAATATCGCGAAATTGCTCAAAGGGTGGGTGAAAAACTCGCCGAAGACTCAAAACTCCGCGGATCAAATCGCTTCTACAGAGGTAAAAGAAGTGATCAAGAGTGATGATGGGAAGGAGTGTGCAGGGGCATTTCAGTCATTTTCTGAGTTTGATCACTCATATCAACAGGCTGGTGTTTCACCTGATCATGAGACCAAACCAGACATAACTGGATGCTGCAGTAACCAAAGTCAATGGTCTTTGTTTGAGAAGTGGTTGTTTGAGGATTCTGGTGGACAGATTGGTGATATTCTATTGGATGAAAACACTAATTTCTTCTGAAGAGTTTGCTTTAATCACATGGTTCTAATTTTAGGATCCTCATCTCTATTTTTTTTTTTGGGTTTTCCAAATTAACTCGCTTAGATTATCGTGAGATAAATCAGTAATAATTTTATTTATTTTCCCTCTTTAATTTACAATTAATGATGGGGTTGTTTTATATATGGCCCTGTGAATTCTGAAGGGGCCTGAAAAATGTCCACCCAATGATTTTAGTAGTATTGGTGTAAAATCCTATATCTATTTTTTATTTATTAAAATGTTGTTATTGCTTGATTTTTCTTTTGCTTTGTAACTTGTAAGTATGATTTACTTTTGAGATGTTAACCTAAAA
CDS Sequence
- >AT3G28910.1
ATGGTGAGGCCTCCTTGTTGTGACAAAGGAGGAGTGAAGAAAGGGCCATGGACTCCTGAAGAAGATATCATTTTAGTCACTTACATCCAAGAACATGGTCCTGGTAATTGGAGAGCTGTTCCTACCAATACTGGGCTGCTTAGATGCAGCAAGAGTTGTAGACTTAGATGGACAAACTATTTAAGGCCAGGAATCAAAAGAGGCAATTTCACAGAACATGAAGAAAAGATGATTGTTCATCTCCAAGCCCTCTTAGGAAATAGATGGGCTGCAATTGCGTCATATCTTCCACAAAGGACAGACAATGACATTAAGAACTATTGGAACACTCATTTGAAGAAGAAACTCAACAAAGTCAATCAAGATTCTCATCAAGAACTTGACCGTTCCTCGCTCTCATCTTCACCATCGTCTTCTTCTGCTAATTCCAACTCAAACATCTCAAGAGGCCAATGGGAAAGGCGACTTCAAACCGATATCCACTTGGCGAAAAAGGCTCTCTCTGAGGCTTTATCTCCTGCCGTTGCACCAATCATTACATCTACAGTGACAACAACGTCTTCCTCTGCTGAATCAAGACGCTCTACTTCCTCAGCTAGCGGGTTTCTTAGGACGCAAGAAACATCTACAACTTATGCCTCAAGCACCGAAAATATCGCGAAATTGCTCAAAGGGTGGGTGAAAAACTCGCCGAAGACTCAAAACTCCGCGGATCAAATCGCTTCTACAGAGGTAAAAGAAGTGATCAAGAGTGATGATGGGAAGGAGTGTGCAGGGGCATTTCAGTCATTTTCTGAGTTTGATCACTCATATCAACAGGCTGGTGTTTCACCTGATCATGAGACCAAACCAGACATAACTGGATGCTGCAGTAACCAAAGTCAATGGTCTTTGTTTGAGAAGTGGTTGTTTGAGGATTCTGGTGGACAGATTGGTGATATTCTATTGGATGAAAACACTAATTTCTTCTGA - >AT3G28910.2
ATGGTGAGGCCTCCTTGTTGTGACAAAGGAGGAGTGAAGAAAGGGCCATGGACTCCTGAAGAAGATATCATTTTAGTCACTTACATCCAAGAACATGGTCCTGGTAATTGGAGAGCTGTTCCTACCAATACTGGGCTGCTTAGATGCAGCAAGAGTTGTAGACTTAGATGGACAAACTATTTAAGGCCAGGAATCAAAAGAGGCAATTTCACAGAACATGAAGAAAAGATGATTGTTCATCTCCAAGCCCTCTTAGGAAATAGATGGGCTGCAATTGCGTCATATCTTCCACAAAGGACAGACAATGACATTAAGAACTATTGGAACACTCATTTGAAGAAGAAACTCAACAAAGTCAATCAAGATTCTCATCAAGAACTTGACCGTTCCTCGCTCTCATCTTCACCATCGTCTTCTTCTGCTAATTCCAACTCAAACATCTCAAGAGGCCAATGGGAAAGGCGACTTCAAACCGATATCCACTTGGCGAAAAAGGCTCTCTCTGAGGCTTTATCTCCTGCCGTTGCACCAATCATTACATCTACAGTGACAACAACGTCTTCCTCTGCTGAATCAAGACGCTCTACTTCCTCAGCTAGCGGGTTTCTTAGGACGCAAGAAACATCTACAACTTATGCCTCAAGCACCGAAAATATCGCGAAATTGCTCAAAGGGTGGGTGAAAAACTCGCCGAAGACTCAAAACTCCGCGGATCAAATCGCTTCTACAGAGGTAAAAGAAGTGATCAAGAGTGATGATGGGAAGGAGTGTGCAGGGGCATTTCAGTCATTTTCTGAGTTTGATCACTCATATCAACAGGCTGGTGTTTCACCTGATCATGAGACCAAACCAGACATAACTGGATGCTGCAGTAACCAAAGTCAATGGTCTTTGTTTGAGAAGTGGTTGTTTGAGGATTCTGGTGGACAGATTGGTGATATTCTATTGGATGAAAACACTAATTTCTTCTGA
Protein Sequence
- >AT3G28910.1
MVRPPCCDKGGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSSLSSSPSSSSANSNSNISRGQWERRLQTDIHLAKKALSEALSPAVAPIITSTVTTTSSSAESRRSTSSASGFLRTQETSTTYASSTENIAKLLKGWVKNSPKTQNSADQIASTEVKEVIKSDDGKECAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQSQWSLFEKWLFEDSGGQIGDILLDENTNFF - >AT3G28910.2
MVRPPCCDKGGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSSLSSSPSSSSANSNSNISRGQWERRLQTDIHLAKKALSEALSPAVAPIITSTVTTTSSSAESRRSTSSASGFLRTQETSTTYASSTENIAKLLKGWVKNSPKTQNSADQIASTEVKEVIKSDDGKECAGAFQSFSEFDHSYQQAGVSPDHETKPDITGCCSNQSQWSLFEKWLFEDSGGQIGDILLDENTNFF