Information report for AT3G28900
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments. DOI: 10.1186/1471-2164-8-112 ; PMID: 17474978
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A178V7H9
- EMBL: CACRSJ010000106, LUHQ01000003
- AlphaFoldDB: A0A178V7H9
- EnsemblPlants: AT3G28900.1
- Gramene: AT3G28900.1
- KEGG: ath:AT3G28900
- Orthologous matrix: NKRANGP
- ExpressionAtlas: AT3G28900
- InterPro: IPR008195, IPR018065, IPR038562
- PANTHER: PTHR10759
- PROSITE: PS01145
- Gene3D: 6.20.340.10, 6.20.370.70
- SWISS-MODEL: A0A178V7H9
Sequences
cDNA Sequence
- >AT3G28900.1
ATCCCCTTTGGCCGACTCTTACTGACCTCAGAGCTCAGCAAAAATGGTTCAACGTCTTGTTTACCGATCACGTCACTCTTACGCCACCAAGTCCAACCAACACCGCATCGTCAAAACTCCTGGTGGAAAATTGACTTACCAGACGACGAACAAGAGAGCTAGTGGACCTAAGTGCCCTGTTACTGGCAAGAGAATCCAAGGGATTCCGCATTTGAGACCTGCTGAGTACAAAAGGTCAAGGTTGGCAAGGAACGAGAGGACAGTGAATCGTGCATATGGTGGTGTTCTATCTGGAGTTGCTGTTAGGGAGAGGATCGTCAGGGCCTTCTTGGTTGAAGAACAGAAGATTGTGAAGAAGGTTTTGAAGCTTCAGAAGGCGAAAGAGAAGACTGCACCAAAGAGTTAGAAGAAAACTTTTTGGAGTCTTATAAGATCTATGGAGAAACTTATTTTGTAGGGATCGATAGACATGAGTTTTTGTTCACGAAAAAAAGAGGCAAATGTTTGTTTTTTGATAATTTCTGAGTTCTGTTTTGTTCTCCATTCAGATTTTACTTTCTCAAAGTGTCTCCGTTTGTGTTCATTGGTCTTTTTTTTTTTCACTGGAAATATAGATTTCATTGATAGAAGATCTGAGTACAAGAGCTGACAAGAGAAATACTCTTCCAGAGGCTAAGTCGGAGAGTACATGGAACCTCCCGGGGACTAAAAACATATTAAAATGAAACAAGGGAAAAAAACCCGATCCAACAAATTACACCACATCTGATCCCTTTACTCTACCTAAACACGCATGGGTGGTGAGATAAAACCAACATTCAAAGACCCGAAGGAGTGAGAGCCTTATAAAGGAGAGAACGAGATCGGGATCTTCAGGTGAAATTTCAGAAGTCTGAGGCGAAAATTCGGATAGAAACGTCTCTGCCTTGGATAGATTGGCCATATCTGACTCTGCTCTTGAAAAAGACAAAAGACAAGCAGCAAAAACCTAGAAAGGAAAAGTTTTAGACTTTATATATCTAGATCTGAAAATTCAGATTCAAAACCGTTGGAAGAAAATCTCTCAGATGTGTCTAAAGAGAAAATAAAACAAAGGTAGAATAAGAGCAAAACAAAAGACCCCGGTTCCGGTGCTGAGAAAGCCACCGGAACCGGTAACCCTAAATACAGGCGGCGGCTGGAGTTTTAGAGAAAAGGGAGAGTAAAATTCTAAGAGAGAGAAAAGGGCGAACCGAAAAGTTTGTGTTCATTTGTCTATTGGTATAAT
CDS Sequence
- >AT3G28900.1
ATGGTTCAACGTCTTGTTTACCGATCACGTCACTCTTACGCCACCAAGTCCAACCAACACCGCATCGTCAAAACTCCTGGTGGAAAATTGACTTACCAGACGACGAACAAGAGAGCTAGTGGACCTAAGTGCCCTGTTACTGGCAAGAGAATCCAAGGGATTCCGCATTTGAGACCTGCTGAGTACAAAAGGTCAAGGTTGGCAAGGAACGAGAGGACAGTGAATCGTGCATATGGTGGTGTTCTATCTGGAGTTGCTGTTAGGGAGAGGATCGTCAGGGCCTTCTTGGTTGAAGAACAGAAGATTGTGAAGAAGGTTTTGAAGCTTCAGAAGGCGAAAGAGAAGACTGCACCAAAGAGTTAG
Protein Sequence
- >AT3G28900.1
MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS