Gene Details:

• Gene ID: AT3G28730
• Gene Symbol: ATHMG, HMG, NFD, SSRP1
• Gene Name: high mobility group, high mobility group, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D
• Description: high mobility group;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G28730.1

Plant Ontology Annotations:

• PO:0006020  — lateral root apical meristem — meristema apical de la raíz lateral (Spanish, exact), 側根頂端分裂組織 (Japanese, exact), apical meristem of lateral root (related), lateral root meristem (related)
• PO:0006081  — primary root apical meristem — meristema apical de la raíz primaria (Spanish, exact), 一次根頂端分裂組織 (Japanese, exact), apical meristem of primary root (related), embryonic root meristem (related)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Germplasm Phenotype:

• ssrp1-2 hub1-4  — Very reduced leaf size.Leaf shape resembles that if ssrp1-2 single mutant.Earlier flowering than either single mutant.

Function-related keywords:

• lateral root apical meristem ,  primary root apical meristem ,  plant embryo ,  shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  pollen tube cell ,  pollen ,  guard cell

Literature:

• adaxial patterning in Arabidopsis ovules.   DOI:  10.1101/gad.13.23.3160 ;  PMID:  10601041
• Variability in Arabidopsis thaliana chromosomal high-mobility-group-1-like proteins.   DOI:  10.1111/j.1432-1033.1997.00646.x ;  PMID:  9461286
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Phosphorylation of maize and Arabidopsis HMGB proteins by protein kinase CK2alpha.   DOI:  10.1021/bi027350d ;  PMID:  12653554
• HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein.   DOI:  10.1021/bi035931c ;  PMID:  14756567
• The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins.   DOI:  10.1016/j.jmb.2006.02.068 ;  PMID:  16563436
• The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome.   DOI:  10.1111/j.1365-313X.2004.02242.x ;  PMID:  15546350
• Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus.   DOI:  10.1105/tpc.106.047274 ;  PMID:  17114349
• Overlapping expression patterns among the genes encoding Arabidopsis chromosomal high mobility group (HMG) proteins.   DOI:  10.1016/j.febslet.2007.02.015 ;  PMID:  17316617
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2.   DOI:  10.1111/j.1365-313X.2009.04096.x ;  PMID:  19947984
• The role of the transcript elongation factors FACT and HUB1 in leaf growth and the induction of flowering.   DOI:  10.4161/psb.5.6.11646 ;  PMID:  20404555
• The Composition of the Arabidopsis RNA Polymerase II Transcript Elongation Complex Reveals the Interplay between Elongation and mRNA Processing Factors.   DOI:  10.1105/tpc.16.00735 ;  PMID:  28351991
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137

Sequences: