Gene Details:
- Gene ID: AT3G28430
- Gene Symbol: GFS9, TT9
- Gene Name: green fluorescent seed 9, TRANSPARENT TESTA 9
- Description: CLEC16A-like protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS164 — pale brown seeds due to reduced levels of brown pigment in seed coat (testa); approximately wild-type anthocyanin levels observed in leaves, stems and other tissues.
- echidna gfs9 — Severe growth defects,short roots, reduced seed set.
Function-related keywords:
- shoot axis apex , root , shoot system , plant embryo , stamen , sepal , flower , inflorescence flower pedicel , collective leaf structure , pollen
Literature:
- Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. DOI: 10.1046/j.1365-313x.1995.08050659.x ; PMID: 8528278
- Arabidopsis ECHIDNA protein is involved in seed coloration, protein trafficking to vacuoles, and vacuolar biogenesis. DOI: 10.1093/jxb/eraa147 ; PMID: 32201898
Sequences:
cDNA Sequence
- >AT3G28430.1
GGATCTTTCAATTGAAGATTCTTTCTTTGAATTCGAGATTGAACCCGACCCGGATCCGAATCCGAATCCAAATCCAACGCCAGCTCTCAACCCACATCGGTGCTTCAATTCGCAATTGCCGTCATCAATCTCTGTTGTTTTACCGGAAGAAACATCTAAACAATCATTCGAAAAATTCGAACTTTTTATTCCCCTCGATATACGATTTGATTTTGTATGATTTTGATCCCTGGATCAGAGATTTCGTCAGAGTTTGTGGAATTTGGTTTAATCGACGAGAAGCAATAATGGAAATTGGGTTTTCTCGAGAGTGAAGGATGATCCAGAGAAGAAGACTGGAACTTTCCAAAGGATTGATTTAAACAATCATGTGGCTTTCCTTCTTAAGACCCAGAGATCGATTCTCCTTAGCCGAACTCAGGTATTTGACTGACCAGCTGAGAAAGATTCAGATAGTAAACGAGGCTAATAAGGATCTCGTTATCGAGGCACTGAGATCGATTGCGGAGATATTAACTTATGGGGATCAGCATGACCCCTTATTCTTTGAATTTTTTATGGAGAAACAAGTAATGGGAGAGTTTGTACGTATTTTGAGGGTTAGCAAGACAGTAACAGTTTCTGTCCAGTTGTTGCAAACCATGAGTATAATGATCCAAAACCTAAAAAGTGAACAAGCCATCTATTACTTGTTCAGTAACGAATATGTAAACTATTTGATAACATATACATTTGACTTCCAACACGAAGAGCTTCTATCTTACTACATATCCTTCTTAAGAGCTGTTAGTGGGAAGCTGAACAAGCATACAATATCGTTGCTTTTGAAGACCGAGAACGATGTAGTAGTTTCTTTCCCCCTTTATGTCGAAGGCATACAATTTGCATTTCATGAAGAGAACATGATACGCACTGCAGTTCGTGCCCTGACTCTTAATGTATATCACGTTGGCGATGAATCTGTGAATGATTATGTAGTTAGTCCACCGCACACCGAGTACTTTTCAAAATTAATTTCATTTTTCCAAAAGCAATGCATGGATCTAAGTGCAATGGTCTTGAACACTCTAAAAAGCCCATCTCCGGATTCAGGTGGAAAATTGTTTTCTGCCGTTGATGGGATTGAGGACACCTTGTACTACTTTAGTGATGTTATCTCTGCTGGCATACCTGATATCGGGAGGCTGATAACAGATCACATTCTGCAGCATCTAACTCTCCCACTTCTTCTCCCGTCTTTATGCTCCGAGGCTGTAAATGACATATCAGTTGATCCTGTCACTTCTCTTTATCTGCTTTCATGCATCCTGCGGATAGTTAAAATCAAAGATTTGGCAAATATGACTGCTGCTACTCTTTTCTGCCCTGTAAAAGCATTCATTTCAAGTTCCCTAGTGAAACCTAATAGCAGCTTGGCTCCTGAAGGCCTTACATATGTAAATGGGCATCCAGACAAGGGTGTTACTGAGGAGGCAAATCAACAGTGTTCAAGCACTGCGGCAGGCATGAGTGACGATGGAAATTCCCACTTATGCAGTGAAGATACTCCGAAAAGTATCTTCAACAATTCTCATATGACGTTTAGGGAGACTTTACTTCAATATATTTCTGAAGGAGATGATGTACAAGCTCAGGGTTCCTTGTTTGTGCTAGCCACTCTGCTGCAGACAAAAGAACTTGAAGAGTCAATGCTAGATGCTTTTGGCATTCTTCCTCAGCGTAAGCAGCACAAAAAACTTTTGCTGCAATCTTTGGTTGGGGAGGACACTGGTGAAGAACAACTATTTTCACCGCGAAATGGTTCCATGAGAGATGGCTTAAGTAGTGAACTTGATTGGTATCTACGGAGGTTGGAGGAGCAGTTTGGAGTGTGCTGTTCATTGCCTGGGGCTGCAAGGTGCCCCCGTGTACATAGACATCAGGTGGTGGATACATTGGTCACTCTTCTCTGCCGAGAAAACATATCTGCAGAAACATTATGGGATGGAGGATGGCTTTTACGCCAATTGCTTCCTTATAGTGAGGCAGAATTTAATCGTAAACATCTCAAGATGCTGAATGTTTCGTATGAGAAATGCAAAAATTCCCTTACCAGGGAAATTAAAGGTATCTGGCCTGATCTACTCATCAGGGTACTGCTTGATGAGTGGAGAAAGTGCAAAAGAGTAATCGAAGCTCCATCCCCTCAAAAAGAGCCTAAATCTGTTCTTCTTCAGCTGGATAGATCCTCTTCTAATGATAACTCTGTTAGCGAATCATCATTCACAGCTGGTGAAAGAATGTGCGAGGTGGTAAAGGTTTTCGTGCTTCTTCATCAACTCCAAATTTTCTCGCTCGGTAGGTCCTTACCCGAGCAGCCGCCTATTTATCCTCCAGCCGACCGATCTGAAACTTCTCGTGCCACAAGAGCTGGTCTGGATGTATCAGTCCCCAAACCTGGCACCGAACTGAAGCTAGTTGATGCTGTACCCTGTAGGATTGCCTTTGAAAGAGGCAAGGAACGAGATTTCTCATTTCTAGCATTATCATCCGGTGAGTCTGGATGGATTGTCCTTGCTGATCCAGATAATGGAATCGTCCGTGTAACGGCACCTTTAGCCGGCTGCAAACCCCGAATAGATGAAAAGCACCCGAGATGGCTACACTTGAGAATCCGACCATCTACATTACCGTTGTTGGATCCAACAAAGCGAGGAGTCTATGAGAAGCTCAAGTCCAAAGGTCTAGTAGATGGGAGATGGATATTAGCATTCAGGGACGATGAATCTTGCCACTCTGCTTACTCAATGGTTGCAGGTGAGATCGATCTACAATGCAGCGAGGTAGAAAGAAGGTTAAGGCCATTGTTTGACCTTGAAAGAAACCAGCTAGAAGATCAATGAAACATCATACTGCCGATACCTTGCCTTCATCGATCGACTTTGTCTTCGTCGGGTTTGAGATCTCACATTCAAAAGTTTGGTAATGATCTTCCCCATCTTGAATATACTAAACTCCAAGCAATTTAGATGCACTCTTAGGAGCAGCTTCCATGATTCTTGCAACGTACCCAGTTTTCAGGTACCTTGTTTCACAAGTTTCGTGTCCATTTTTTGTTTGTTTGTTTTCGTTTATTATTTTTTTATTTTTTTTTGTAATAGTGGTCTTAATGTAACATCATTGTATAAAATACCATTTGCTTCATCGACATATCATCTAACGACCATATACCTATGTATCAAGATATTGTAGGTTTGCGACATATGGAGATTCTCATTTCATTAATGAGCTCCAAAAGAAACAAACTTTATTCAGCTGATATGTTCTTCCTCATAAACATGCATTATTAGATTGTTATATATCAC
CDS Sequence
- >AT3G28430.1
ATGTGGCTTTCCTTCTTAAGACCCAGAGATCGATTCTCCTTAGCCGAACTCAGGTATTTGACTGACCAGCTGAGAAAGATTCAGATAGTAAACGAGGCTAATAAGGATCTCGTTATCGAGGCACTGAGATCGATTGCGGAGATATTAACTTATGGGGATCAGCATGACCCCTTATTCTTTGAATTTTTTATGGAGAAACAAGTAATGGGAGAGTTTGTACGTATTTTGAGGGTTAGCAAGACAGTAACAGTTTCTGTCCAGTTGTTGCAAACCATGAGTATAATGATCCAAAACCTAAAAAGTGAACAAGCCATCTATTACTTGTTCAGTAACGAATATGTAAACTATTTGATAACATATACATTTGACTTCCAACACGAAGAGCTTCTATCTTACTACATATCCTTCTTAAGAGCTGTTAGTGGGAAGCTGAACAAGCATACAATATCGTTGCTTTTGAAGACCGAGAACGATGTAGTAGTTTCTTTCCCCCTTTATGTCGAAGGCATACAATTTGCATTTCATGAAGAGAACATGATACGCACTGCAGTTCGTGCCCTGACTCTTAATGTATATCACGTTGGCGATGAATCTGTGAATGATTATGTAGTTAGTCCACCGCACACCGAGTACTTTTCAAAATTAATTTCATTTTTCCAAAAGCAATGCATGGATCTAAGTGCAATGGTCTTGAACACTCTAAAAAGCCCATCTCCGGATTCAGGTGGAAAATTGTTTTCTGCCGTTGATGGGATTGAGGACACCTTGTACTACTTTAGTGATGTTATCTCTGCTGGCATACCTGATATCGGGAGGCTGATAACAGATCACATTCTGCAGCATCTAACTCTCCCACTTCTTCTCCCGTCTTTATGCTCCGAGGCTGTAAATGACATATCAGTTGATCCTGTCACTTCTCTTTATCTGCTTTCATGCATCCTGCGGATAGTTAAAATCAAAGATTTGGCAAATATGACTGCTGCTACTCTTTTCTGCCCTGTAAAAGCATTCATTTCAAGTTCCCTAGTGAAACCTAATAGCAGCTTGGCTCCTGAAGGCCTTACATATGTAAATGGGCATCCAGACAAGGGTGTTACTGAGGAGGCAAATCAACAGTGTTCAAGCACTGCGGCAGGCATGAGTGACGATGGAAATTCCCACTTATGCAGTGAAGATACTCCGAAAAGTATCTTCAACAATTCTCATATGACGTTTAGGGAGACTTTACTTCAATATATTTCTGAAGGAGATGATGTACAAGCTCAGGGTTCCTTGTTTGTGCTAGCCACTCTGCTGCAGACAAAAGAACTTGAAGAGTCAATGCTAGATGCTTTTGGCATTCTTCCTCAGCGTAAGCAGCACAAAAAACTTTTGCTGCAATCTTTGGTTGGGGAGGACACTGGTGAAGAACAACTATTTTCACCGCGAAATGGTTCCATGAGAGATGGCTTAAGTAGTGAACTTGATTGGTATCTACGGAGGTTGGAGGAGCAGTTTGGAGTGTGCTGTTCATTGCCTGGGGCTGCAAGGTGCCCCCGTGTACATAGACATCAGGTGGTGGATACATTGGTCACTCTTCTCTGCCGAGAAAACATATCTGCAGAAACATTATGGGATGGAGGATGGCTTTTACGCCAATTGCTTCCTTATAGTGAGGCAGAATTTAATCGTAAACATCTCAAGATGCTGAATGTTTCGTATGAGAAATGCAAAAATTCCCTTACCAGGGAAATTAAAGGTATCTGGCCTGATCTACTCATCAGGGTACTGCTTGATGAGTGGAGAAAGTGCAAAAGAGTAATCGAAGCTCCATCCCCTCAAAAAGAGCCTAAATCTGTTCTTCTTCAGCTGGATAGATCCTCTTCTAATGATAACTCTGTTAGCGAATCATCATTCACAGCTGGTGAAAGAATGTGCGAGGTGGTAAAGGTTTTCGTGCTTCTTCATCAACTCCAAATTTTCTCGCTCGGTAGGTCCTTACCCGAGCAGCCGCCTATTTATCCTCCAGCCGACCGATCTGAAACTTCTCGTGCCACAAGAGCTGGTCTGGATGTATCAGTCCCCAAACCTGGCACCGAACTGAAGCTAGTTGATGCTGTACCCTGTAGGATTGCCTTTGAAAGAGGCAAGGAACGAGATTTCTCATTTCTAGCATTATCATCCGGTGAGTCTGGATGGATTGTCCTTGCTGATCCAGATAATGGAATCGTCCGTGTAACGGCACCTTTAGCCGGCTGCAAACCCCGAATAGATGAAAAGCACCCGAGATGGCTACACTTGAGAATCCGACCATCTACATTACCGTTGTTGGATCCAACAAAGCGAGGAGTCTATGAGAAGCTCAAGTCCAAAGGTCTAGTAGATGGGAGATGGATATTAGCATTCAGGGACGATGAATCTTGCCACTCTGCTTACTCAATGGTTGCAGGTGAGATCGATCTACAATGCAGCGAGGTAGAAAGAAGGTTAAGGCCATTGTTTGACCTTGAAAGAAACCAGCTAGAAGATCAATGA
Protein Sequence
- >AT3G28430.1
MWLSFLRPRDRFSLAELRYLTDQLRKIQIVNEANKDLVIEALRSIAEILTYGDQHDPLFFEFFMEKQVMGEFVRILRVSKTVTVSVQLLQTMSIMIQNLKSEQAIYYLFSNEYVNYLITYTFDFQHEELLSYYISFLRAVSGKLNKHTISLLLKTENDVVVSFPLYVEGIQFAFHEENMIRTAVRALTLNVYHVGDESVNDYVVSPPHTEYFSKLISFFQKQCMDLSAMVLNTLKSPSPDSGGKLFSAVDGIEDTLYYFSDVISAGIPDIGRLITDHILQHLTLPLLLPSLCSEAVNDISVDPVTSLYLLSCILRIVKIKDLANMTAATLFCPVKAFISSSLVKPNSSLAPEGLTYVNGHPDKGVTEEANQQCSSTAAGMSDDGNSHLCSEDTPKSIFNNSHMTFRETLLQYISEGDDVQAQGSLFVLATLLQTKELEESMLDAFGILPQRKQHKKLLLQSLVGEDTGEEQLFSPRNGSMRDGLSSELDWYLRRLEEQFGVCCSLPGAARCPRVHRHQVVDTLVTLLCRENISAETLWDGGWLLRQLLPYSEAEFNRKHLKMLNVSYEKCKNSLTREIKGIWPDLLIRVLLDEWRKCKRVIEAPSPQKEPKSVLLQLDRSSSNDNSVSESSFTAGERMCEVVKVFVLLHQLQIFSLGRSLPEQPPIYPPADRSETSRATRAGLDVSVPKPGTELKLVDAVPCRIAFERGKERDFSFLALSSGESGWIVLADPDNGIVRVTAPLAGCKPRIDEKHPRWLHLRIRPSTLPLLDPTKRGVYEKLKSKGLVDGRWILAFRDDESCHSAYSMVAGEIDLQCSEVERRLRPLFDLERNQLEDQ