Information report for AT3G28230
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
- shoot axis apex , root , plant embryo , vascular leaf , sepal , flower , hypocotyl , leaf apex , collective leaf structure , pollen tube cell , pollen
Literature and News
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- The Arabidopsis Mediator Complex Subunit16 Is a Key Component of Basal Resistance against the Necrotrophic Fungal Pathogen Sclerotinia sclerotiorum. DOI: 10.1104/pp.15.00351 ; PMID: 26143252
Gene Resources
- UniProt: F4IZ10
- EMBL: CP002686
- AlphaFoldDB: F4IZ10
- EnsemblPlants: AT3G28230.2
- Gramene: AT3G28230.2
- KEGG: ath:AT3G28230
- ExpressionAtlas: AT3G28230
- InterPro: IPR018972
- PANTHER: PTHR13237, PTHR13237:SF8
- SWISS-MODEL: F4IZ10
Homologs
- Brassica oleracea Bo3g036750
- Pyrus bretschneideri Pbr009756.1
Sequences
cDNA Sequence
- >AT3G28230.2
AATCGACGCCTTTCTTCGATCTTCTTCACAGACGACACACCATTGATAAATCTCCATCGTAGAAAGTTTTATCTAACTGTTTGATCGAGCTGATCAACGATGAAAATTGACAACGCTAGAGAAGAAAAGAAGAAAAAAGGACAGAAACGCAAGCACCAGCAGAATGATCAAGCTGATATGGAAATGTTAAAACTTCGAGCTGCTCTAGAGGGAAAACATAGAAGCAATGGTTCTACTGTTTTAAAGTCTGCTAAAGCTCAAAAACGCCAGAAATCAGAAGACTCAGAAGATGAATTTTACAGACAAGTGAAACAGAAACAAGAAGCTAAAAAAGCTGCCAAAGCAGAAATCTATTCAAGGAAACCATATTTGATCCCGTCATCGCCAGATCTGGTGGATGGAAGACGATTGATTTCAAATCAGATGGCTAGTAACAGAGGATTGACCCGGAAACGCAACAAGGACCATAAAAACCCGAGAAAGAAGTACCGGGATCAGCACAAGAAAATAGTCATTAACCGCAAAGGACAGGTCAGAGATATCAGGACGCAAGTGGGTCCATATGCAGGAGAAACTCGCGGTATCAATCCCTACACAAGCCGCAGCATCCGAATCAAGAACTAA - >AT3G28230.1
AATCGACGCCTTTCTTCGATCTTCTTCACAGACGACACACCATTGATAAATCTCCATCGTAGAAAGTTTTATCTAACTGTTTGATCGAGCTGATCAACGATGAAAATTGACAACGCTAGAGAAGAAAAGAAGAAAAAAGGACAGAAACGCAAGCACCAGCAGAATGATCAAGCTGATATGGAAATGTTAAAACTTCGAGCTGCTCTAGAGGGAAAACATAGAAGCAATGGTTCTACTGTTTTAAAGTCTGCTAAAGCTCAAAAACGCCAGAAATCAGAAGACTCAGAAGATGAATTTTACAGACAAGTGAAACAGAAACAAGAAGCTAAAAAAGCTGCCAAAGCAGAAATCTATTCAAGGAAACCATATTTGATCCCGTCATCGCCAGATCTGGTGGATGGAAGACGATTGATTTCAAATCAGATGGCTAGTAACAGAGGATTGACCCGGAAACGCAACAAGGACCATAAAAACCCGAGAAAGAAGTACCGGGATCAGCACAAGAAAATAGTCATTAACCGCAAAGGACAGGTCAGAGATATCAGGACGCAAGTGGGTCCATATGCAGGAGAAACTCGCGGTATCAATCCCTACACAAGCCGCAGCATCCGAATCAAGAACTAA
CDS Sequence
- >AT3G28230.2
ATGAAAATTGACAACGCTAGAGAAGAAAAGAAGAAAAAAGGACAGAAACGCAAGCACCAGCAGAATGATCAAGCTGATATGGAAATGTTAAAACTTCGAGCTGCTCTAGAGGGAAAACATAGAAGCAATGGTTCTACTGTTTTAAAGTCTGCTAAAGCTCAAAAACGCCAGAAATCAGAAGACTCAGAAGATGAATTTTACAGACAAGTGAAACAGAAACAAGAAGCTAAAAAAGCTGCCAAAGCAGAAATCTATTCAAGGAAACCATATTTGATCCCGTCATCGCCAGATCTGGTGGATGGAAGACGATTGATTTCAAATCAGATGGCTAGTAACAGAGGATTGACCCGGAAACGCAACAAGGACCATAAAAACCCGAGAAAGAAGTACCGGGATCAGCACAAGAAAATAGTCATTAACCGCAAAGGACAGGTCAGAGATATCAGGACGCAAGTGGGTCCATATGCAGGAGAAACTCGCGGTATCAATCCCTACACAAGCCGCAGCATCCGAATCAAGAACTAA - >AT3G28230.1
ATGAAAATTGACAACGCTAGAGAAGAAAAGAAGAAAAAAGGACAGAAACGCAAGCACCAGCAGAATGATCAAGCTGATATGGAAATGTTAAAACTTCGAGCTGCTCTAGAGGGAAAACATAGAAGCAATGGTTCTACTGTTTTAAAGTCTGCTAAAGCTCAAAAACGCCAGAAATCAGAAGACTCAGAAGATGAATTTTACAGACAAGTGAAACAGAAACAAGAAGCTAAAAAAGCTGCCAAAGCAGAAATCTATTCAAGGAAACCATATTTGATCCCGTCATCGCCAGATCTGGTGGATGGAAGACGATTGATTTCAAATCAGATGGCTAGTAACAGAGGATTGACCCGGAAACGCAACAAGGACCATAAAAACCCGAGAAAGAAGTACCGGGATCAGCACAAGAAAATAGTCATTAACCGCAAAGGACAGGTCAGAGATATCAGGACGCAAGTGGGTCCATATGCAGGAGAAACTCGCGGTATCAATCCCTACACAAGCCGCAGCATCCGAATCAAGAACTAA
Protein Sequence
- >AT3G28230.2
MKIDNAREEKKKKGQKRKHQQNDQADMEMLKLRAALEGKHRSNGSTVLKSAKAQKRQKSEDSEDEFYRQVKQKQEAKKAAKAEIYSRKPYLIPSSPDLVDGRRLISNQMASNRGLTRKRNKDHKNPRKKYRDQHKKIVINRKGQVRDIRTQVGPYAGETRGINPYTSRSIRIKN - >AT3G28230.1
MKIDNAREEKKKKGQKRKHQQNDQADMEMLKLRAALEGKHRSNGSTVLKSAKAQKRQKSEDSEDEFYRQVKQKQEAKKAAKAEIYSRKPYLIPSSPDLVDGRRLISNQMASNRGLTRKRNKDHKNPRKKYRDQHKKIVINRKGQVRDIRTQVGPYAGETRGINPYTSRSIRIKN