Information report for AT3G28210
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- root , vascular leaf , stamen , sepal , flower , cotyledon , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Global and hormone-induced gene expression changes during shoot development in Arabidopsis. DOI: 10.1105/tpc.006668 ; PMID: 12417700
- The timing of senescence and response to pathogens is altered in the ascorbate-deficient Arabidopsis mutant vitamin c-1. DOI: 10.1104/pp.103.032185 ; PMID: 15064386
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. DOI: 10.1104/pp.105.067058 ; PMID: 16258017
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection. DOI: 10.1111/j.1365-313X.2006.02849.x ; PMID: 16925600
- Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis. DOI: 10.1007/s00438-006-0165-1 ; PMID: 17033811
- ATR and ATM play both distinct and additive roles in response to ionizing radiation. DOI: 10.1111/j.1365-313X.2006.02931.x ; PMID: 17227549
- Pseudomonas syringae pv. tomato hijacks the Arabidopsis abscisic acid signalling pathway to cause disease. DOI: 10.1038/sj.emboj.7601575 ; PMID: 17304219
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance. DOI: 10.1186/1471-2164-8-450 ; PMID: 18053238
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-91 ; PMID: 18783601
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- miR408 is involved in abiotic stress responses in Arabidopsis. DOI: 10.1111/tpj.12999 ; PMID: 26312768
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178VHW6
- EMBL: CACRSJ010000106, LUHQ01000003
- AlphaFoldDB: A0A178VHW6
- EnsemblPlants: AT3G28210.1, AT3G28210.2
- Gramene: AT3G28210.1, AT3G28210.2
- KEGG: ath:AT3G28210
- Orthologous matrix: YKSHECP
- ExpressionAtlas: AT3G28210
- InterPro: IPR000058, IPR035896
- PANTHER: PTHR14677, PTHR14677:SF20
- SUPFAM: SSF118310
- PROSITE: PS51039
- Gene3D: 4.10.1110.10
- SWISS-MODEL: A0A178VHW6
Homologs
- Brassica napus GSBRNA2T00121976001, GSBRNA2T00034525001, GSBRNA2T00155810001
- Brassica oleracea XP_013591875.1, XP_013602808.1
- Daucus carota DCAR_009058
- Gossypium hirsutum Gh_D01G1926
- Prunus mume XP_008240892.1
- Prunus persica Prupe.7G063400.1.p
- Raphanus raphanistrum RrC1746_p4
- Sesamum indicum XP_011075237.1
Sequences
cDNA Sequence
- >AT3G28210.1
CGCTGGCTTCGTCTCTAAGTCAGCCCCAACCTCTATATATATATAGAATCAAGAACACAAGAAATATAGAACAACAACAACAACAACAAGAAGAACACACGAATAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAGAAGCTTATGGCAGGAGGAGGAACAGAAGCGTTTCCTGATCTTGGAGAGCATTGCCAAGACCCTGATTGCAAATTACTCGATTTTCTCCCTTTTACTTGCGACGGCTGCAAATTGGTGTTTTGTTTGGAGCATAGATCATACAAGTCACATAACTGTCCGAAATCCGATCATGGGAGCAGAACGGTTTCCATCTGTGAAACATGTTCAATAGCGATTGAAACAACTGGTTTTGATGAAAAAGGAATCAAATCTTTGCTTGAGAAACACGAAAGATCCGGAGATTGTGATCCAAACAAGAAAAAGAAACCAACGTGTCCTGTAAAACGTTGCAAAGAGATTCTGACTTTTGCGAATAACCTTACTTGCAAATATTGTGGAGTCAAGTTCTGTTTGAAACACCGGTTTCCGACAGATCATGTCTGTAACAAGAAGATCATTAATACCGCGGGAACAAGCTCGAGGTGGAACGAGAGGTTTATGGAAGCTTTGAGTTTAAGAAACCAGAAAGGGTGTGGAAGAGGGAGCTCTGTTTCATCAAAATCTTCACCATCAGTTAGATCGTTTTAGTTTCTTCTCTTGTAACAATAGTTTGCATCAACCAATTCCTTCTTTATGTTCTCATGTATTTTCCATTGTTTGCAAGAAAGAAGATTAATATTTTCATGAGTAATATTTCGTAAGAGAAGGAAGAAGAATGTTTTTATTAATATTAACTTCATTGGGAAGTTTCTTCTAAATTTTTAGATTCGGTTTTGGGTCCAATTTTTTGGGTCGGTTCCAATACTCAGTAAGAAGACTACTTAGAAAATGTAAATGTGGTGCAGTGTCTGTAATCTAGATTGCATATACATTGAAGAACCCAAAGATTGAATTGTTGTTCGTATGGCTTA - >AT3G28210.2
CGCTGGCTTCGTCTCTAAGTCAGCCCCAACCTCTATATATATATAGAATCAAGAACACAAGAAATATAGAACAACAACAACAACAACAAGAAGAACACACGAATAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAGAAGCTTATGGCAGGAGGAGGAACAGAAGCGTTTCCTGATCTTGGAGAGCATTGCCAAGACCCTGATTGCAAATTACTCGATTTTCTCCCTTTTACTTGCGACGGCTGCAAATTGGTGTTTTGTTTGGAGCATAGATCATACAAGTCACATAACTGTCCGAAATCCGATCATGGGAGCAGAACGGTTTCCATCTGTGAAACATGTTCAATAGCGATTGAAACAACTGGTTTTGATGAAAAAGGAATCAAATCTTTGCTTGAGAAACACGAAAGATCCGGAGATTGTGATCCAAACAAGAAAAAGAAACCAACGTGTCCTGTAAAACGTTGCAAAGAGATTCTGACTTTTGCGAATAACCTTACTTGCAAATATTGTGGAGTCAAGTTCTGTTTGAAACACCGGTTTCCGACAGATCATGTCTGTAACAAGAAGATCATTAATACCGCGGGAACAAGCTCGAGGTGGAACGAGAGGTTTATGGAAGCTTTGAGTTTAAGAAACCAGAAAGGGTGTGGAAGAGGGAGCTCTGTTTCATCAAAATCTTCACCATCAGTTAGATCGTTTTAGTTTCTTCTCTTGTAACAATAGTTTGCATCAACCAATTCCTTCTTTATGTTCTCATGTATTTTCCATTGTTTGCAAGAAAGAAGATTAATATTTTCATGAGTAATATTTCGTAAGAGAAGGAAGAAGAATGTTTTTATTAATATTAACTTCATTGGGAAGTTTCTTCTAAATTTTTAGATTCGGTTTTGGGTCCAATTTTTTGGGTCGGTTCCAATACTCAGTAAGAAGACTACTTAGAAAATGTAAATGTGGTGCAGTGTCTGTAATCTAGATTGCATATACATTGAAGAACCCAAAGATTGAATTGTTGTTCGTATGGCTTA
CDS Sequence
- >AT3G28210.1
ATGGCAGGAGGAGGAACAGAAGCGTTTCCTGATCTTGGAGAGCATTGCCAAGACCCTGATTGCAAATTACTCGATTTTCTCCCTTTTACTTGCGACGGCTGCAAATTGGTGTTTTGTTTGGAGCATAGATCATACAAGTCACATAACTGTCCGAAATCCGATCATGGGAGCAGAACGGTTTCCATCTGTGAAACATGTTCAATAGCGATTGAAACAACTGGTTTTGATGAAAAAGGAATCAAATCTTTGCTTGAGAAACACGAAAGATCCGGAGATTGTGATCCAAACAAGAAAAAGAAACCAACGTGTCCTGTAAAACGTTGCAAAGAGATTCTGACTTTTGCGAATAACCTTACTTGCAAATATTGTGGAGTCAAGTTCTGTTTGAAACACCGGTTTCCGACAGATCATGTCTGTAACAAGAAGATCATTAATACCGCGGGAACAAGCTCGAGGTGGAACGAGAGGTTTATGGAAGCTTTGAGTTTAAGAAACCAGAAAGGGTGTGGAAGAGGGAGCTCTGTTTCATCAAAATCTTCACCATCAGTTAGATCGTTTTAG - >AT3G28210.2
ATGGCAGGAGGAGGAACAGAAGCGTTTCCTGATCTTGGAGAGCATTGCCAAGACCCTGATTGCAAATTACTCGATTTTCTCCCTTTTACTTGCGACGGCTGCAAATTGGTGTTTTGTTTGGAGCATAGATCATACAAGTCACATAACTGTCCGAAATCCGATCATGGGAGCAGAACGGTTTCCATCTGTGAAACATGTTCAATAGCGATTGAAACAACTGGTTTTGATGAAAAAGGAATCAAATCTTTGCTTGAGAAACACGAAAGATCCGGAGATTGTGATCCAAACAAGAAAAAGAAACCAACGTGTCCTGTAAAACGTTGCAAAGAGATTCTGACTTTTGCGAATAACCTTACTTGCAAATATTGTGGAGTCAAGTTCTGTTTGAAACACCGGTTTCCGACAGATCATGTCTGTAACAAGAAGATCATTAATACCGCGGGAACAAGCTCGAGGTGGAACGAGAGGTTTATGGAAGCTTTGAGTTTAAGAAACCAGAAAGGGTGTGGAAGAGGGAGCTCTGTTTCATCAAAATCTTCACCATCAGTTAGATCGTTTTAG
Protein Sequence
- >AT3G28210.1
MAGGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSICETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKYCGVKFCLKHRFPTDHVCNKKIINTAGTSSRWNERFMEALSLRNQKGCGRGSSVSSKSSPSVRSF - >AT3G28210.2
MAGGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSICETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKYCGVKFCLKHRFPTDHVCNKKIINTAGTSSRWNERFMEALSLRNQKGCGRGSSVSSKSSPSVRSF