Gene Details:
- Gene ID: AT3G28180
- Gene Symbol: ATCSLC04, ATCSLC4, CSLC04, CSLC04, CSLC4
- Gene Name: Cellulose-synthase-like C4, Cellulose-synthase-like C4, CELLULOSE-SYNTHASE LIKE C4
- Description: Cellulose-synthase-like C4;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS72435 — reduced levels of xyloglucan (XyG); smaller rosettes and shorter inflorescence stems; bending of inflorescence stems, possibly indicating weaker stems
- CS72436 — reduced levels of xyloglucan (XyG); smaller rosettes and shorter inflorescence stems; bending of inflorescence stems, possibly indicating weaker stems
- CS72437 — reduced levels of xyloglucan (XyG); smaller rosettes and shorter inflorescence stems; bending of inflorescence stems, possibly indicating weaker stems; shorter root hairs; reduced number of pollen tubes following pollination
- CS72438 — lacks detectable xyloglucan (XyG); smaller rosettes and shorter inflorescence stems; bending of inflorescence stems, possibly indicating weaker stems; shorter root hairs; reduced number of pollen tubes following pollination
- SAIL_837_B10 — Bending of infloresence stem.
- SALK_146718 — Bending of infloresence stem.
- cslc456-2 — dramatically reduced levels of XyG
- cslc45612 — shorter root hairs and a reduced number of pollen tubes following 1-h pollinations
- cslc456812 — shorter root hairs and a reduced number of pollen tubes following 1-h pollinations
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. DOI: 10.1073/pnas.0409179102 ; PMID: 15647349
- Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control. DOI: 10.1104/pp.106.079418 ; PMID: 16632591
- The cellulose synthase (CESA) gene superfamily of the moss Physcomitrella patens. DOI: 10.1007/s11103-006-9083-1 ; PMID: 17006591
- Disrupting two Arabidopsis thaliana xylosyltransferase genes results in plants deficient in xyloglucan, a major primary cell wall component. DOI: 10.1105/tpc.108.059873 ; PMID: 18544630
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Xyloglucan xylosyltransferases XXT1, XXT2, and XXT5 and the glucan synthase CSLC4 form Golgi-localized multiprotein complexes. DOI: 10.1104/pp.112.199356 ; PMID: 22665445
- Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes. DOI: 10.1093/pcp/pcu161 ; PMID: 25392066
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The synthesis of xyloglucan, an abundant plant cell wall polysaccharide, requires CSLC function. DOI: 10.1073/pnas.2007245117 ; PMID: 32737163
- Expression of cellulose synthase-like (Csl) genes in insect cells reveals that CslA family members encode mannan synthases. DOI: 10.1073/pnas.0409179102 ; PMID: 15647349
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. DOI: 10.1105/tpc.19.00081 ; PMID: 31266899
Sequences:
cDNA Sequence
- >AT3G28180.1
TTTCAAACAAAGAAAATAATTAAATAAAATCTTCCTTTACAAAAACAAAAGAGGAAAATTCAAAGAAAGGAGAACTCTCTTCTTCTTCTTCTTCTTCTCCTCTCCTCTTTATTTACTTAGTTGGTTCACTTCAGCACATGATCCTCGTCTCTCTTTCTTTCTCTCTCTCAATCACAAGTTTCAGTTACACAGCTGAACCCAAAGTATCTCACATTCTGATCTAATCAGAACACTGTTTTGTCTGTGTAACATAAACAAACGATCCTGTTTTTATGGAAAATTTAATGAAACAGTGACGATTCTTCTACACTTCTTTATAATGACAAACATTTCATAGTACCAAAATACACAAATACCTTTTCTTTATTCTTCTCACCCTTCTCTGTTTCTTTATCATTCATGGCTCCAAATTCAGTAGCAGTGACAATGGAGAAGCCAGACAACTTCTCTTTACTAGAGATCAACGGCTCAGATCCATCCTCATTCCCCGACAAACGTAAATCCATCAGTCCAAAACAATTCTCATGGTTCCTTCTTCTCAAAGCTCATAGACTCATCTCGTGTCTCTCGTGGCTAGTCTCTTCGGTTAAAAAGCGAATCGCGTTCTCCGCGAAGAACATTAACGAAGAAGAAGATCCTAAAAGCAGAGGAAAACAAATGTACAGATTCATCAAAGCTTGTCTTGTCATCTCCATTATTGCCTTGTCCATAGAAATCGTTGCACATTTCAAGAAATGGAATCTTGATCTCATTAACCGACCGTCTTGGGAGGTTTACGGGCTTGTCGAATGGTCGTACATGGCTTGGCTCTCGTTTCGATCCGATTACATCGCTCCTCTTGTCATCAGTCTCTCCAGATTCTGCACTGTACTCTTTTTGATTCAGTCTCTTGATCGGTTAGTCCTCTGTCTCGGTTGCTTTTGGATCAAATTTAAAAAGATCGAACCTAAGCTCACCGAAGAATCTATCGATTTAGAAGACCCCTCCAGTTTCCCAATGGTCCTTATTCAGATCCCAATGTGCAACGAACGAGAGGTGTATGAACAATCAATAGGAGCAGCTTCACAACTTGATTGGCCAAAAGATAGGATCTTAATTCAAGTATTAGATGATTCAGACGATCCAAATTTACAGCTTTTGATCAAAGAAGAAGTATCGGTTTGGGCCGAAAAAGGCGTAAACATAATTTACAGGCATAGGTTGATCAGAACTGGTTACAAAGCTGGCAATTTGAAATCAGCCATGACTTGTGATTACGTTAAAGATTACGAGTTTGTGACTATCTTCGACGCAGATTTCACACCAAATCCTGATTTCCTCAAGAAGACTGTTCCTCATTTCAAGGGTAATCCAGAGCTAGGGTTGGTCCAAGCAAGGTGGTCATTTGTGAACAAAGATGAGAATCTCCTCACGAGGCTACAAAACATAAACTTATGTTTCCACTTCGAAGTAGAACAACAAGTGAACGGTGTGTTTCTCAATTTCTTCGGATTCAATGGAACCGCTGGAGTATGGAGGATCAAGGCATTGGAAGAATCCGGCGGATGGCTCGAGAGAACCACCGTGGAAGATATGGATATCGCGGTTAGAGCGCATCTCAACGGCTGGAAGTTTATTTACCTTAATGATGTTGAAGTCACTTGCGAGTTGCCAGAGTCTTATGAAGCTTACAAGAAGCAACAACATCGTTGGCATTCCGGTCCTATGCAGCTGTTCCGGTTATGCCTTCCTTCAATTATCAAATCAAAGATATCGGTTTGGAAGAAGGCGAATTTGATCTTCCTTTTCTTTCTTCTAAGGAAGCTTATTCTACCATTTTACTCATTCACACTCTTTTGCATTATACTTCCATTGACAATGTTCATACCCGAAGCCGAGCTTCCGTTGTGGATCATCTGCTATGTTCCTATCTTCATTTCGCTTCTCAACATTCTCCCGTCACCTAAATCTTTCCCTTTCTTAGTCCCTTACCTTCTTTTCGAAAACACAATGTCAATAACCAAGTTCAACGCCATGATCTCCGGGCTGTTTCAGTTTGGATCGGCTTACGAGTGGGTTGTGACGAAGAAAACCGGGAGATCATCGGAGTCCGATTTGCTAGCGTTTGCTGAAAAGGAAGAGAAGTTGCATAGGAGAAACTCGGAGTCAGGTTTGGAGCTTCTGAGCAAACTTAAGGAGCAAGAGACAAATCTTGTAGGGCAAGAAACCGTGAAGAAGAGCCTTGGAGGGCTAATGAGGCCGAAGAACAAGAAGAAGACGAACATGGTGTTCAAGAAAGAGCTCGGGCTTGCGTTCTTGCTGCTAACCGCAGCTGCAAGGAGCTTTCTATCGGCGCACGGTCTTCACTTCTACTTTTTGTTGTTTCAGGGACTGTCTTTCTTGGTTGTAGGGTTGGATTTGATCGGAGAACAGATCAGCTAGACACACACAAAACCAAGACAGAGAACAAGGAAAAAAATACCGTTTATATTCACTATTTTTTTGTTTGTTTTTTAAATTCTTTTCCCTTTTTATATGTGGGTTTTATACATAATTTTCAAGAACTTATAATGTCCAGTTTCAGATAAATGAATTGAAACGAATTTGTTATATGATTTTGGCTTAACTTTAAAAAATCAT
CDS Sequence
- >AT3G28180.1
ATGGCTCCAAATTCAGTAGCAGTGACAATGGAGAAGCCAGACAACTTCTCTTTACTAGAGATCAACGGCTCAGATCCATCCTCATTCCCCGACAAACGTAAATCCATCAGTCCAAAACAATTCTCATGGTTCCTTCTTCTCAAAGCTCATAGACTCATCTCGTGTCTCTCGTGGCTAGTCTCTTCGGTTAAAAAGCGAATCGCGTTCTCCGCGAAGAACATTAACGAAGAAGAAGATCCTAAAAGCAGAGGAAAACAAATGTACAGATTCATCAAAGCTTGTCTTGTCATCTCCATTATTGCCTTGTCCATAGAAATCGTTGCACATTTCAAGAAATGGAATCTTGATCTCATTAACCGACCGTCTTGGGAGGTTTACGGGCTTGTCGAATGGTCGTACATGGCTTGGCTCTCGTTTCGATCCGATTACATCGCTCCTCTTGTCATCAGTCTCTCCAGATTCTGCACTGTACTCTTTTTGATTCAGTCTCTTGATCGGTTAGTCCTCTGTCTCGGTTGCTTTTGGATCAAATTTAAAAAGATCGAACCTAAGCTCACCGAAGAATCTATCGATTTAGAAGACCCCTCCAGTTTCCCAATGGTCCTTATTCAGATCCCAATGTGCAACGAACGAGAGGTGTATGAACAATCAATAGGAGCAGCTTCACAACTTGATTGGCCAAAAGATAGGATCTTAATTCAAGTATTAGATGATTCAGACGATCCAAATTTACAGCTTTTGATCAAAGAAGAAGTATCGGTTTGGGCCGAAAAAGGCGTAAACATAATTTACAGGCATAGGTTGATCAGAACTGGTTACAAAGCTGGCAATTTGAAATCAGCCATGACTTGTGATTACGTTAAAGATTACGAGTTTGTGACTATCTTCGACGCAGATTTCACACCAAATCCTGATTTCCTCAAGAAGACTGTTCCTCATTTCAAGGGTAATCCAGAGCTAGGGTTGGTCCAAGCAAGGTGGTCATTTGTGAACAAAGATGAGAATCTCCTCACGAGGCTACAAAACATAAACTTATGTTTCCACTTCGAAGTAGAACAACAAGTGAACGGTGTGTTTCTCAATTTCTTCGGATTCAATGGAACCGCTGGAGTATGGAGGATCAAGGCATTGGAAGAATCCGGCGGATGGCTCGAGAGAACCACCGTGGAAGATATGGATATCGCGGTTAGAGCGCATCTCAACGGCTGGAAGTTTATTTACCTTAATGATGTTGAAGTCACTTGCGAGTTGCCAGAGTCTTATGAAGCTTACAAGAAGCAACAACATCGTTGGCATTCCGGTCCTATGCAGCTGTTCCGGTTATGCCTTCCTTCAATTATCAAATCAAAGATATCGGTTTGGAAGAAGGCGAATTTGATCTTCCTTTTCTTTCTTCTAAGGAAGCTTATTCTACCATTTTACTCATTCACACTCTTTTGCATTATACTTCCATTGACAATGTTCATACCCGAAGCCGAGCTTCCGTTGTGGATCATCTGCTATGTTCCTATCTTCATTTCGCTTCTCAACATTCTCCCGTCACCTAAATCTTTCCCTTTCTTAGTCCCTTACCTTCTTTTCGAAAACACAATGTCAATAACCAAGTTCAACGCCATGATCTCCGGGCTGTTTCAGTTTGGATCGGCTTACGAGTGGGTTGTGACGAAGAAAACCGGGAGATCATCGGAGTCCGATTTGCTAGCGTTTGCTGAAAAGGAAGAGAAGTTGCATAGGAGAAACTCGGAGTCAGGTTTGGAGCTTCTGAGCAAACTTAAGGAGCAAGAGACAAATCTTGTAGGGCAAGAAACCGTGAAGAAGAGCCTTGGAGGGCTAATGAGGCCGAAGAACAAGAAGAAGACGAACATGGTGTTCAAGAAAGAGCTCGGGCTTGCGTTCTTGCTGCTAACCGCAGCTGCAAGGAGCTTTCTATCGGCGCACGGTCTTCACTTCTACTTTTTGTTGTTTCAGGGACTGTCTTTCTTGGTTGTAGGGTTGGATTTGATCGGAGAACAGATCAGCTAG
Protein Sequence
- >AT3G28180.1
MAPNSVAVTMEKPDNFSLLEINGSDPSSFPDKRKSISPKQFSWFLLLKAHRLISCLSWLVSSVKKRIAFSAKNINEEEDPKSRGKQMYRFIKACLVISIIALSIEIVAHFKKWNLDLINRPSWEVYGLVEWSYMAWLSFRSDYIAPLVISLSRFCTVLFLIQSLDRLVLCLGCFWIKFKKIEPKLTEESIDLEDPSSFPMVLIQIPMCNEREVYEQSIGAASQLDWPKDRILIQVLDDSDDPNLQLLIKEEVSVWAEKGVNIIYRHRLIRTGYKAGNLKSAMTCDYVKDYEFVTIFDADFTPNPDFLKKTVPHFKGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVEVTCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIIKSKISVWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWIICYVPIFISLLNILPSPKSFPFLVPYLLFENTMSITKFNAMISGLFQFGSAYEWVVTKKTGRSSESDLLAFAEKEEKLHRRNSESGLELLSKLKEQETNLVGQETVKKSLGGLMRPKNKKKTNMVFKKELGLAFLLLTAAARSFLSAHGLHFYFLLFQGLSFLVVGLDLIGEQIS