Information report for AT3G27980
Gene Details
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Functional Descriptions
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Functional Keywords
Literature and News
- Pectin methylesterases: sequence-structural features and phylogenetic relationships. DOI: 10.1016/j.carres.2004.06.023 ; PMID: 15337457
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Transposon-mediated expansion and diversification of a family of ULP-like genes. DOI: 10.1093/molbev/msk015 ; PMID: 16581939
- Root transcriptome analysis of Arabidopsis thaliana exposed to beneficial Bacillus subtilis FB17 rhizobacteria revealed genes for bacterial recruitment and plant defense independent of malate efflux. DOI: 10.1007/s00425-013-1920-2 ; PMID: 23794026
- A comparative genome analysis of PME and PMEI families reveals the evolution of pectin metabolism in plant cell walls. DOI: 10.1371/journal.pone.0072082 ; PMID: 23951288
- The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily. DOI: 10.3389/fpls.2022.863892 ; PMID: 35401607
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
Homologs
- Actinidia chinensis CEY00_Acc01461, CEY00_Acc31166, CEY00_Acc00481, CEY00_Acc28397, CEY00_Acc02728
- Capsicum annuum T459_03324
- Cucumis melo MELO3C006817
- Cucumis sativus CsGy3G016050
- Glycine max Glyma.03G029100, Glyma.05G236900
- Populus trichocarpa POPTR_015G127700v3, POPTR_012G126800v3
- Prunus persica PRUPE_2G141000
- Rosa chinensis RchiOBHm_Chr1g0374551
Sequences
cDNA Sequence
- >AT3G27980.1
ATGTTGGTTAAAGTTTTCTCTTTTTTCATCCTTATGATAATAATGGTAATTGGCGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAGGCGGGTTCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGATACAAAACAACATGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGAGATGATGGAGTCGGAGGAGAATTCCCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGTAGTTTTGGCTCTTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATGGCCCTTCTTGGTTATTCCATGTTGACAAGAAAGATCTATATCTCAATGCTGAGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATCGTCGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATGTTAGAAGAACGTACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAACATCACAACAAGTTCGGATCTAGATACAGCAACCGTAAAAACGTATCTTGGAAGACCTTGGAGGAGATTTTCAACAGTCGCGGTTCTGCAATCTTTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGAATTCACTGTAGCCAAGCTCTTAGATGGAGAAACTTGGCTGAAAGAAAGTCGAATTCCATATGAAAGTGGATTGTAA
CDS Sequence
- >AT3G27980.1
ATGTTGGTTAAAGTTTTCTCTTTTTTCATCCTTATGATAATAATGGTAATTGGCGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAGGCGGGTTCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGATACAAAACAACATGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGAGATGATGGAGTCGGAGGAGAATTCCCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGTAGTTTTGGCTCTTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATGGCCCTTCTTGGTTATTCCATGTTGACAAGAAAGATCTATATCTCAATGCTGAGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATCGTCGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATGTTAGAAGAACGTACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAACATCACAACAAGTTCGGATCTAGATACAGCAACCGTAAAAACGTATCTTGGAAGACCTTGGAGGAGATTTTCAACAGTCGCGGTTCTGCAATCTTTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGAATTCACTGTAGCCAAGCTCTTAGATGGAGAAACTTGGCTGAAAGAAAGTCGAATTCCATATGAAAGTGGATTGTAA
Protein Sequence
- >AT3G27980.1
MLVKVFSFFILMIIMVIGVSKEYCDDKQSCQNLLLELKAGSSSLSEIRRRDLLIIVLKNSVRRIDMAMIGVMDDTKQHEEMENDMLGVKEDTNLFEEMMESEENSHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLENLISRARVVLALFISISLRDNTELISVIPNGPSWLFHVDKKDLYLNAEIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL