Gene Details:
- Gene ID: AT3G27980
- Gene Symbol: PME30
- Gene Name: pectin methylesterase 30
- Description: Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Function-related keywords:
Literature:
- Pectin methylesterases: sequence-structural features and phylogenetic relationships. DOI: 10.1016/j.carres.2004.06.023 ; PMID: 15337457
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Transposon-mediated expansion and diversification of a family of ULP-like genes. DOI: 10.1093/molbev/msk015 ; PMID: 16581939
- Root transcriptome analysis of Arabidopsis thaliana exposed to beneficial Bacillus subtilis FB17 rhizobacteria revealed genes for bacterial recruitment and plant defense independent of malate efflux. DOI: 10.1007/s00425-013-1920-2 ; PMID: 23794026
- A comparative genome analysis of PME and PMEI families reveals the evolution of pectin metabolism in plant cell walls. DOI: 10.1371/journal.pone.0072082 ; PMID: 23951288
- The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily. DOI: 10.3389/fpls.2022.863892 ; PMID: 35401607
- Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0261-9 ; PMID: 16622707
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Sequences:
cDNA Sequence
- >AT3G27980.1
ATGTTGGTTAAAGTTTTCTCTTTTTTCATCCTTATGATAATAATGGTAATTGGCGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAGGCGGGTTCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGATACAAAACAACATGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGAGATGATGGAGTCGGAGGAGAATTCCCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGTAGTTTTGGCTCTTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATGGCCCTTCTTGGTTATTCCATGTTGACAAGAAAGATCTATATCTCAATGCTGAGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATCGTCGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATGTTAGAAGAACGTACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAACATCACAACAAGTTCGGATCTAGATACAGCAACCGTAAAAACGTATCTTGGAAGACCTTGGAGGAGATTTTCAACAGTCGCGGTTCTGCAATCTTTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGAATTCACTGTAGCCAAGCTCTTAGATGGAGAAACTTGGCTGAAAGAAAGTCGAATTCCATATGAAAGTGGATTGTAA
CDS Sequence
- >AT3G27980.1
ATGTTGGTTAAAGTTTTCTCTTTTTTCATCCTTATGATAATAATGGTAATTGGCGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAGGCGGGTTCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGATACAAAACAACATGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGAGATGATGGAGTCGGAGGAGAATTCCCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGTAGTTTTGGCTCTTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATGGCCCTTCTTGGTTATTCCATGTTGACAAGAAAGATCTATATCTCAATGCTGAGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATCGTCGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATGTTAGAAGAACGTACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAACATCACAACAAGTTCGGATCTAGATACAGCAACCGTAAAAACGTATCTTGGAAGACCTTGGAGGAGATTTTCAACAGTCGCGGTTCTGCAATCTTTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGAATTCACTGTAGCCAAGCTCTTAGATGGAGAAACTTGGCTGAAAGAAAGTCGAATTCCATATGAAAGTGGATTGTAA
Protein Sequence
- >AT3G27980.1
MLVKVFSFFILMIIMVIGVSKEYCDDKQSCQNLLLELKAGSSSLSEIRRRDLLIIVLKNSVRRIDMAMIGVMDDTKQHEEMENDMLGVKEDTNLFEEMMESEENSHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLENLISRARVVLALFISISLRDNTELISVIPNGPSWLFHVDKKDLYLNAEIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL