Gene Details:

• Gene ID: AT3G27925
• Gene Symbol: DEG1, DEGP1
• Gene Name: degradation of periplasmic proteins 1, DegP protease 1
• Description: DegP protease 1;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G27925.1     AT3G27925.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  guard cell

Literature:

• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature.   DOI:  10.1104/pp.125.4.1912 ;  PMID:  11299370
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Expression in multigene families. Analysis of chloroplast and mitochondrial proteases.   DOI:  10.1104/pp.104.043299 ;  PMID:  15266057
• Cross genome comparisons of serine proteases in Arabidopsis and rice.   DOI:  10.1186/1471-2164-7-200 ;  PMID:  16895613
• Protease gene families in Populus and Arabidopsis.   DOI:  10.1186/1471-2229-6-30 ;  PMID:  17181860
• High light stimulates Deg1-dependent cleavage of the minor LHCII antenna proteins CP26 and CP29 and the PsbS protein in Arabidopsis thaliana.   DOI:  10.1007/s00425-011-1505-x ;  PMID:  21877139
• The family of Deg/HtrA proteases in plants.   DOI:  10.1186/1471-2229-12-52 ;  PMID:  22520048
• Light intensity and quality stimulated Deg1-dependent cleavage of PSII components in the chloroplasts of maize.   DOI:  10.1016/j.plaphy.2013.02.028 ;  PMID:  23563498
• Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation.   DOI:  10.1093/jxb/ert227 ;  PMID:  24064926
• Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family.   DOI:  10.3389/fpls.2014.00396 ;  PMID:  25161662
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis.   DOI:  10.3389/fpls.2016.00168 ;  PMID:  26909098
• EGY3: homologue of S2P protease located in chloroplasts.   DOI:  10.1111/plb.13087 ;  PMID:  31886945
• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Analysis of the Arabidopsis nuclear proteome and its response to cold stress.   DOI:  10.1046/j.1365-313x.2003.01907.x ;  PMID:  14617066
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: