Gene Details:
- Gene ID: AT3G27740
- Gene Symbol: CARA, VEN6
- Gene Name: carbamoyl phosphate synthetase A, VENOSA 6
- Description: carbamoyl phosphate synthetase A;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Molecular analysis of de novo pyrimidine synthesis in solanaceous species. DOI: 10.1023/a:1019854531254 ; PMID: 12369616
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- SAGE analysis of transcriptome responses in Arabidopsis roots exposed to 2,4,6-trinitrotoluene. DOI: 10.1104/pp.103.028019 ; PMID: 14551330
- Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. DOI: 10.1002/rcm.1376 ; PMID: 15052571
- The regulatory PII protein controls arginine biosynthesis in Arabidopsis. DOI: 10.1016/j.febslet.2006.02.075 ; PMID: 16545809
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Effects of phosphate limitation on expression of genes involved in pyrimidine synthesis and salvaging in Arabidopsis. DOI: 10.1016/j.plaphy.2005.01.003 ; PMID: 15820655
- Analysis of ven3 and ven6 reticulate mutants reveals the importance of arginine biosynthesis in Arabidopsis leaf development. DOI: 10.1111/j.1365-313X.2010.04425.x ; PMID: 21265888
- A survey of dominant mutations in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2012.08.006 ; PMID: 22995285
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Sequences:
cDNA Sequence
- >AT3G27740.2
ATCGACCCACCAACCCTAAAAAACCTTGACGCCGTTTTCTTCTTCGATCTTCTTCTTCCTCCAGAGAAAACAACATGGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTCCTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCTGTCATCCGTTGCTCCACTTCTCCACTCACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGGCCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGGCAGTTTGTGCTAATGACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAACTTCTGCAAATGTCTCGTTCATGGGATATCGTAGGTATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATGAATGGGTTGACAAAACAAACGCTGAATGGGATTTCAACACGAATTCACGAGATGGGAAATCCTACAAAGTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTTTCATCTTACGGATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAATGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTTGCTTGGTCAAGCTTTGGGGGGTAAAACCTTCAAGATGAAGTTTGGTCATCATGGAGGAAACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAACTATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAGAGCTTATGAAGAGATCGAAACAAAGCTCCTGATCAATGAGAAGTACTCTTTGTTTTTGTACGTTGCTGTTTTTAATCATGGCACTTAAATTAAAACCAACTGTTTTGTTAGTGATAATGGATTGGCATTATTGTTTCTTTGCTTTGACTGTATTGAGCAACCATCCAACCTATAAAATAAGTAAGATTTTGTAAAAGTAATAAAGAGATAAAGAGATGTGAGAGTTTGTGTCT - >AT3G27740.1
ATCGACCCACCAACCCTAAAAAACCTTGACGCCGTTTTCTTCTTCGATCTTCTTCTTCCTCCAGAGAAAACAACATGGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTCCTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCTGTCATCCGTTGCTCCACTTCTCCACTCACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGGCCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGGCAGTTTGTGCTAATGACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAACTTCTGCAAATGTCTCGTTCATGGGATATCGTAGGTATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATGAATGGGTTGACAAAACAAACGCTGAATGGGATTTCAACACGAATTCACGAGATGGGAAATCCTACAAAGTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTTTCATCTTACGGATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAATGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTTGCTTGGTCAAGCTTTGGGGGGTAAAACCTTCAAGATGAAGTTTGGTCATCATGGAGGAAACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAACTATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAGAGCTTATGAAGAGATCGAAACAAAGCTCCTGATCAATGAGAAGTACTCTTTGTTTTTGTACGTTGCTGTTTTTAATCATGGCACTTAAATTAAAACCAACTGTTTTGTTAGTGATAATGGATTGGCATTATTGTTTCTTTGCTTTGACTGTATTGAGCAACCATCCAACCTATAAAATAAGTAAGATTTTGTAAAAGTAATAAAGAGATAAAGAGATGTGAGAGTTTGTGTCT
CDS Sequence
- >AT3G27740.2
ATGGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTCCTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCTGTCATCCGTTGCTCCACTTCTCCACTCACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGGCCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGGCAGTTTGTGCTAATGACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAACTTCTGCAAATGTCTCGTTCATGGGATATCGTAGGTATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATGAATGGGTTGACAAAACAAACGCTGAATGGGATTTCAACACGAATTCACGAGATGGGAAATCCTACAAAGTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTTTCATCTTACGGATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAATGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTTGCTTGGTCAAGCTTTGGGGGGTAAAACCTTCAAGATGAAGTTTGGTCATCATGGAGGAAACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAACTATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAGAGCTTATGAAGAGATCGAAACAAAGCTCCTGA - >AT3G27740.1
ATGGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTCCTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCTGTCATCCGTTGCTCCACTTCTCCACTCACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGGCCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGGCAGTTTGTGCTAATGACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAACTTCTGCAAATGTCTCGTTCATGGGATATCGTAGGTATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATGAATGGGTTGACAAAACAAACGCTGAATGGGATTTCAACACGAATTCACGAGATGGGAAATCCTACAAAGTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTTTCATCTTACGGATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAATGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTTGCTTGGTCAAGCTTTGGGGGGTAAAACCTTCAAGATGAAGTTTGGTCATCATGGAGGAAACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAACTATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAGAGCTTATGAAGAGATCGAAACAAAGCTCCTGA
Protein Sequence
- >AT3G27740.2
MAMATRTLGFVLPTSLSSQPSFDRRGGGFRVSVIRCSTSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRSKQSS - >AT3G27740.1
MAMATRTLGFVLPTSLSSQPSFDRRGGGFRVSVIRCSTSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRSKQSS